RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 A2ML1A8K2U0 1454 aa18.75■□□□□ 0.59
VTI1BP1-201ENST00000486325 EIF4G2P78344 907 aaKnown RBP eCLIP18.74■□□□□ 0.59
VTI1BP1-201ENST00000486325 ADGRF5Q8IZF2 1346 aa18.74■□□□□ 0.59
VTI1BP1-201ENST00000486325 CARD11Q9BXL7 1154 aa18.73■□□□□ 0.59
VTI1BP1-201ENST00000486325 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
VTI1BP1-201ENST00000486325 PTPRMP28827 1452 aa18.72■□□□□ 0.59
VTI1BP1-201ENST00000486325 RALGAPBQ86X10 1494 aa18.72■□□□□ 0.59
VTI1BP1-201ENST00000486325 ROCK2O75116 1388 aaKnown RBP18.71■□□□□ 0.59
VTI1BP1-201ENST00000486325 NRXN1Q9ULB1 1477 aa18.71■□□□□ 0.59
VTI1BP1-201ENST00000486325 C14orf93Q9H972 538 aaKnown RBP18.7■□□□□ 0.58
VTI1BP1-201ENST00000486325 PPLO60437 1756 aa18.7■□□□□ 0.58
VTI1BP1-201ENST00000486325 NEXMIFQ5QGS0 1516 aa18.69■□□□□ 0.58
VTI1BP1-201ENST00000486325 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
VTI1BP1-201ENST00000486325 RIMS2Q9UQ26 1411 aa18.69■□□□□ 0.58
VTI1BP1-201ENST00000486325 GPRASP1Q5JY77 1395 aa18.68■□□□□ 0.58
VTI1BP1-201ENST00000486325 TMEM2Q9UHN6 1383 aa18.68■□□□□ 0.58
VTI1BP1-201ENST00000486325 EID1Q9Y6B2 187 aa18.68■□□□□ 0.58
VTI1BP1-201ENST00000486325 NBPF1Q3BBV0 1214 aa18.67■□□□□ 0.58
VTI1BP1-201ENST00000486325 CFAP70Q5T0N1 1121 aa18.67■□□□□ 0.58
VTI1BP1-201ENST00000486325 MYO5BQ9ULV0 1848 aa18.67■□□□□ 0.58
VTI1BP1-201ENST00000486325 HSPA5P11021 654 aaKnown RBP18.66■□□□□ 0.58
VTI1BP1-201ENST00000486325 NUTM2DQ5VT03 806 aaPredicted RBP18.66■□□□□ 0.58
VTI1BP1-201ENST00000486325 TRPM1Q7Z4N2 1603 aa18.66■□□□□ 0.58
VTI1BP1-201ENST00000486325 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
VTI1BP1-201ENST00000486325 KDM4FA0A1W2PPD8 638 aa18.65■□□□□ 0.58
VTI1BP1-201ENST00000486325 UBR1Q8IWV7 1749 aa18.65■□□□□ 0.58
VTI1BP1-201ENST00000486325 KIAA1210Q9ULL0 1709 aa18.65■□□□□ 0.58
VTI1BP1-201ENST00000486325 TXNDC2Q86VQ3 553 aa18.64■□□□□ 0.57
VTI1BP1-201ENST00000486325 USP47Q96K76 1375 aa18.62■□□□□ 0.57
VTI1BP1-201ENST00000486325 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
VTI1BP1-201ENST00000486325 LAMC1P11047 1609 aa18.6■□□□□ 0.57
VTI1BP1-201ENST00000486325 CEP170BQ9Y4F5 1589 aaPredicted RBP18.6■□□□□ 0.57
VTI1BP1-201ENST00000486325 SLIT1O75093 1534 aa18.6■□□□□ 0.57
VTI1BP1-201ENST00000486325 SLC24A1O60721 1099 aa18.6■□□□□ 0.57
VTI1BP1-201ENST00000486325 ARHGAP23Q9P227 1491 aa18.59■□□□□ 0.57
VTI1BP1-201ENST00000486325 ANKLE2Q86XL3 938 aa18.59■□□□□ 0.57
VTI1BP1-201ENST00000486325 BCANQ96GW7 911 aa18.59■□□□□ 0.57
VTI1BP1-201ENST00000486325 LTKP29376 864 aa18.58■□□□□ 0.56
VTI1BP1-201ENST00000486325 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.56
VTI1BP1-201ENST00000486325 HIRIP3Q9BW71 556 aaPredicted RBP18.57■□□□□ 0.56
VTI1BP1-201ENST00000486325 SCAF11Q99590 1463 aaKnown RBP18.57■□□□□ 0.56
VTI1BP1-201ENST00000486325 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
VTI1BP1-201ENST00000486325 PLEKHG1Q9ULL1 1385 aa18.56■□□□□ 0.56
VTI1BP1-201ENST00000486325 ST20-MTHFSA0A0A6YYL1 179 aa18.56■□□□□ 0.56
VTI1BP1-201ENST00000486325 ZNF142P52746 1687 aaPredicted RBP18.56■□□□□ 0.56
VTI1BP1-201ENST00000486325 TMEM132EQ6IEE7 984 aa18.54■□□□□ 0.56
VTI1BP1-201ENST00000486325 TBX22Q9Y458 520 aa18.53■□□□□ 0.56
VTI1BP1-201ENST00000486325 ALKQ9UM73 1620 aa18.52■□□□□ 0.56
VTI1BP1-201ENST00000486325 TRAK1Q9UPV9 953 aa18.5■□□□□ 0.55
VTI1BP1-201ENST00000486325 ADGRB1O14514 1584 aa18.5■□□□□ 0.55
VTI1BP1-201ENST00000486325 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
VTI1BP1-201ENST00000486325 SIRT1Q96EB6 747 aa18.48■□□□□ 0.55
VTI1BP1-201ENST00000486325 LRPPRCP42704 1394 aaKnown RBP18.47■□□□□ 0.55
VTI1BP1-201ENST00000486325 TMF1P82094 1093 aa18.47■□□□□ 0.55
VTI1BP1-201ENST00000486325 CDCA8Q53HL2 280 aa18.47■□□□□ 0.55
VTI1BP1-201ENST00000486325 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
VTI1BP1-201ENST00000486325 IQGAP1P46940 1657 aa18.47■□□□□ 0.55
VTI1BP1-201ENST00000486325 CENPJQ9HC77 1338 aaPredicted RBP18.47■□□□□ 0.55
VTI1BP1-201ENST00000486325 ABCC11Q96J66 1382 aa18.46■□□□□ 0.55
VTI1BP1-201ENST00000486325 TESK2Q96S53 571 aa18.46■□□□□ 0.55
VTI1BP1-201ENST00000486325 STK26Q9P289 416 aa18.46■□□□□ 0.55
VTI1BP1-201ENST00000486325 ADAMTS13Q76LX8 1427 aa18.46■□□□□ 0.55
VTI1BP1-201ENST00000486325 MED14O60244 1454 aa18.45■□□□□ 0.54
VTI1BP1-201ENST00000486325 DIEXFQ68CQ4 756 aaKnown RBP18.44■□□□□ 0.54
VTI1BP1-201ENST00000486325 SLC26A8Q96RN1 970 aa18.44■□□□□ 0.54
VTI1BP1-201ENST00000486325 METP08581 1390 aa18.43■□□□□ 0.54
VTI1BP1-201ENST00000486325 PIK3R4Q99570 1358 aa18.43■□□□□ 0.54
VTI1BP1-201ENST00000486325 NRXN3Q9Y4C0 1643 aa18.43■□□□□ 0.54
VTI1BP1-201ENST00000486325 POGKQ9P215 609 aa18.43■□□□□ 0.54
VTI1BP1-201ENST00000486325 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
VTI1BP1-201ENST00000486325 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
VTI1BP1-201ENST00000486325 SBNO2Q9Y2G9 1366 aa18.42■□□□□ 0.54
VTI1BP1-201ENST00000486325 DIP2AQ14689 1571 aa18.42■□□□□ 0.54
VTI1BP1-201ENST00000486325 C11orf95C9JLR9 678 aaPredicted RBP18.42■□□□□ 0.54
VTI1BP1-201ENST00000486325 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
VTI1BP1-201ENST00000486325 NCKAP5LQ9HCH0 1330 aa18.41■□□□□ 0.54
VTI1BP1-201ENST00000486325 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
VTI1BP1-201ENST00000486325 ASXL1Q8IXJ9 1541 aa18.4■□□□□ 0.54
VTI1BP1-201ENST00000486325 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
VTI1BP1-201ENST00000486325 DLC1Q96QB1 1528 aa18.39■□□□□ 0.54
VTI1BP1-201ENST00000486325 PRAM1Q96QH2 718 aa18.39■□□□□ 0.53
VTI1BP1-201ENST00000486325 SETD1AO15047 1707 aaKnown RBP18.39■□□□□ 0.53
VTI1BP1-201ENST00000486325 PUS7Q96PZ0 661 aaKnown RBP18.38■□□□□ 0.53
VTI1BP1-201ENST00000486325 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
VTI1BP1-201ENST00000486325 TECPR2O15040 1411 aa18.37■□□□□ 0.53
VTI1BP1-201ENST00000486325 FAM135BQ49AJ0 1406 aa18.37■□□□□ 0.53
VTI1BP1-201ENST00000486325 HSPA2P54652 639 aa18.36■□□□□ 0.53
VTI1BP1-201ENST00000486325 EVC2Q86UK5 1308 aa18.36■□□□□ 0.53
VTI1BP1-201ENST00000486325 LMTK3Q96Q04 1460 aa18.35■□□□□ 0.53
VTI1BP1-201ENST00000486325 POLR3GLQ9BT43 218 aa18.35■□□□□ 0.53
VTI1BP1-201ENST00000486325 POLR1AO95602 1720 aaPredicted RBP18.34■□□□□ 0.53
VTI1BP1-201ENST00000486325 DISP3Q9P2K9 1392 aa18.33■□□□□ 0.53
VTI1BP1-201ENST00000486325 ARHGEF28Q8N1W1 1705 aaKnown RBP18.33■□□□□ 0.52
VTI1BP1-201ENST00000486325 WAPLQ7Z5K2 1190 aa18.33■□□□□ 0.52
VTI1BP1-201ENST00000486325 KCNA6P17658 529 aa18.32■□□□□ 0.52
VTI1BP1-201ENST00000486325 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
VTI1BP1-201ENST00000486325 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
VTI1BP1-201ENST00000486325 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
VTI1BP1-201ENST00000486325 PTPRUQ92729 1446 aa18.31■□□□□ 0.52
VTI1BP1-201ENST00000486325 CPS1P31327 1500 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms