RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 SPRYD7Q5W111 196 aa10.3□□□□□ -0.76
PHC3-211ENST00000486042 ZNF598Q86UK7 904 aaKnown RBP10.3□□□□□ -0.76
PHC3-211ENST00000486042 EYA1Q99502 592 aa10.3□□□□□ -0.76
PHC3-211ENST00000486042 WDR70Q9NW82 654 aa10.29□□□□□ -0.76
PHC3-211ENST00000486042 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
PHC3-211ENST00000486042 EMID1Q96A84 441 aaPredicted RBP10.28□□□□□ -0.76
PHC3-211ENST00000486042 BLOC1S3Q6QNY0 202 aa10.26□□□□□ -0.77
PHC3-211ENST00000486042 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
PHC3-211ENST00000486042 POTECB2RU33 542 aa10.22□□□□□ -0.77
PHC3-211ENST00000486042 GDF9O60383 454 aa10.21□□□□□ -0.77
PHC3-211ENST00000486042 ZNF697Q5TEC3 545 aa10.21□□□□□ -0.77
PHC3-211ENST00000486042 LIAT1Q6ZQX7 453 aa10.21□□□□□ -0.77
PHC3-211ENST00000486042 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
PHC3-211ENST00000486042 DNAJB2P25686 324 aa10.2□□□□□ -0.78
PHC3-211ENST00000486042 KMT5BQ4FZB7 885 aa10.2□□□□□ -0.78
PHC3-211ENST00000486042 FAM187AA6NFU0 413 aa10.19□□□□□ -0.78
PHC3-211ENST00000486042 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
PHC3-211ENST00000486042 TLL1O43897 1013 aa10.18□□□□□ -0.78
PHC3-211ENST00000486042 S1PR4O95977 384 aa10.18□□□□□ -0.78
PHC3-211ENST00000486042 TREML4Q6UXN2 200 aa10.17□□□□□ -0.78
PHC3-211ENST00000486042 RBM46Q8TBY0 533 aaKnown RBP10.17□□□□□ -0.78
PHC3-211ENST00000486042 TMEM134Q9H6X4 195 aa10.17□□□□□ -0.78
PHC3-211ENST00000486042 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.17□□□□□ -0.78
PHC3-211ENST00000486042 ADH1BP00325 375 aa10.15□□□□□ -0.78
PHC3-211ENST00000486042 LCE2AQ5TA79 106 aaPredicted RBP10.15□□□□□ -0.78
PHC3-211ENST00000486042 AAASQ9NRG9 546 aa10.15□□□□□ -0.78
PHC3-211ENST00000486042 TNFRSF10AO00220 468 aa10.14□□□□□ -0.79
PHC3-211ENST00000486042 NR1I2O75469 434 aa10.14□□□□□ -0.79
PHC3-211ENST00000486042 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
PHC3-211ENST00000486042 CFHP08603 1231 aa10.12□□□□□ -0.79
PHC3-211ENST00000486042 SLC6A16Q9GZN6 736 aa10.12□□□□□ -0.79
PHC3-211ENST00000486042 PTGDRQ13258 359 aa10.11□□□□□ -0.79
PHC3-211ENST00000486042 ADGRG1Q9Y653 693 aa10.11□□□□□ -0.79
PHC3-211ENST00000486042 RCCD1A6NED2 376 aa10.1□□□□□ -0.79
PHC3-211ENST00000486042 ST8SIA5O15466 376 aa10.1□□□□□ -0.79
PHC3-211ENST00000486042 CRIPAKQ8N1N5 446 aa10.1□□□□□ -0.79
PHC3-211ENST00000486042 PLA2G2CQ5R387 149 aa10.08□□□□□ -0.8
PHC3-211ENST00000486042 SLC10A3P09131 477 aa10.07□□□□□ -0.8
PHC3-211ENST00000486042 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
PHC3-211ENST00000486042 PKD2L1Q9P0L9 805 aa10.07□□□□□ -0.8
PHC3-211ENST00000486042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.05□□□□□ -0.8
PHC3-211ENST00000486042 AVPP01185 164 aa10.05□□□□□ -0.8
PHC3-211ENST00000486042 MLLT3P42568 568 aaPredicted RBP10.05□□□□□ -0.8
PHC3-211ENST00000486042 RPIAP49247 311 aa10.05□□□□□ -0.8
PHC3-211ENST00000486042 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
PHC3-211ENST00000486042 FOXC1Q12948 553 aa10.03□□□□□ -0.8
PHC3-211ENST00000486042 RSPH4AQ5TD94 716 aa10.03□□□□□ -0.8
PHC3-211ENST00000486042 PAXIP1Q6ZW49 1069 aaPredicted RBP10.03□□□□□ -0.8
PHC3-211ENST00000486042 CFAP44Q96MT7 982 aa10.03□□□□□ -0.8
PHC3-211ENST00000486042 SPSB2Q99619 263 aa10.03□□□□□ -0.8
PHC3-211ENST00000486042 WFS1O76024 890 aa10.02□□□□□ -0.81
PHC3-211ENST00000486042 TOR4AQ9NXH8 423 aa10.02□□□□□ -0.81
PHC3-211ENST00000486042 CD2BP2O95400 341 aaKnown RBP10.01□□□□□ -0.81
PHC3-211ENST00000486042 CTC1Q2NKJ3 1217 aa10.01□□□□□ -0.81
PHC3-211ENST00000486042 AXIN1O15169 862 aa10□□□□□ -0.81
PHC3-211ENST00000486042 OATP04181 439 aa9.99□□□□□ -0.81
PHC3-211ENST00000486042 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
PHC3-211ENST00000486042 FAM161AQ3B820 660 aa9.99□□□□□ -0.81
PHC3-211ENST00000486042 STK17AQ9UEE5 414 aa9.99□□□□□ -0.81
PHC3-211ENST00000486042 DACH1Q9UI36 760 aa9.99□□□□□ -0.81
PHC3-211ENST00000486042 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
PHC3-211ENST00000486042 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
PHC3-211ENST00000486042 CYP4X1Q8N118 509 aa9.98□□□□□ -0.81
PHC3-211ENST00000486042 WIPF1O43516 503 aa9.97□□□□□ -0.81
PHC3-211ENST00000486042 PUS10Q3MIT2 529 aaKnown RBP9.97□□□□□ -0.81
PHC3-211ENST00000486042 GMPR2Q9P2T1 348 aaKnown RBP9.97□□□□□ -0.81
PHC3-211ENST00000486042 FCHSD2O94868 740 aa9.96□□□□□ -0.82
PHC3-211ENST00000486042 PXYLP1Q8TE99 480 aa9.96□□□□□ -0.82
PHC3-211ENST00000486042 INSM1Q01101 510 aaPredicted RBP9.95□□□□□ -0.82
PHC3-211ENST00000486042 NFX1Q12986 1120 aaKnown RBP9.95□□□□□ -0.82
PHC3-211ENST00000486042 FCF1Q9Y324 198 aaKnown RBP9.94□□□□□ -0.82
PHC3-211ENST00000486042 MORN1Q5T089 497 aa9.92□□□□□ -0.82
PHC3-211ENST00000486042 THAP11Q96EK4 314 aa9.92□□□□□ -0.82
PHC3-211ENST00000486042 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
PHC3-211ENST00000486042 METTL3Q86U44 580 aaKnown RBP9.9□□□□□ -0.82
PHC3-211ENST00000486042 TTC24A2A3L6 582 aaPredicted RBP9.89□□□□□ -0.83
PHC3-211ENST00000486042 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
PHC3-211ENST00000486042 ATP6V1AP38606 617 aa9.89□□□□□ -0.83
PHC3-211ENST00000486042 FAM160A2Q8N612 972 aaPredicted RBP9.89□□□□□ -0.83
PHC3-211ENST00000486042 KCNV2Q8TDN2 545 aa9.89□□□□□ -0.83
PHC3-211ENST00000486042 ZBTB24O43167 697 aaPredicted RBP9.88□□□□□ -0.83
PHC3-211ENST00000486042 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
PHC3-211ENST00000486042 FUT2Q10981 343 aa9.86□□□□□ -0.83
PHC3-211ENST00000486042 HIC1Q14526 733 aa9.86□□□□□ -0.83
PHC3-211ENST00000486042 SNIP1Q8TAD8 396 aaKnown RBP9.86□□□□□ -0.83
PHC3-211ENST00000486042 WNT7AO00755 349 aa9.85□□□□□ -0.83
PHC3-211ENST00000486042 RDH13Q8NBN7 331 aa9.85□□□□□ -0.83
PHC3-211ENST00000486042 SENP2Q9HC62 589 aa9.85□□□□□ -0.83
PHC3-211ENST00000486042 SLC27A5Q9Y2P5 690 aa9.85□□□□□ -0.83
PHC3-211ENST00000486042 BRICD5Q6PL45 260 aa9.84□□□□□ -0.83
PHC3-211ENST00000486042 ATP13A2Q9NQ11 1180 aa9.84□□□□□ -0.83
PHC3-211ENST00000486042 TERTO14746 1132 aaKnown RBP9.83□□□□□ -0.84
PHC3-211ENST00000486042 SMPD1P17405 629 aa9.83□□□□□ -0.84
PHC3-211ENST00000486042 MSS51Q4VC12 460 aa9.83□□□□□ -0.84
PHC3-211ENST00000486042 TRIM47Q96LD4 638 aa9.82□□□□□ -0.84
PHC3-211ENST00000486042 GCGRP47871 477 aa9.81□□□□□ -0.84
PHC3-211ENST00000486042 DDX11L8A8MPP1 907 aa9.8□□□□□ -0.84
PHC3-211ENST00000486042 SNRPBP14678 240 aaKnown RBP9.8□□□□□ -0.84
PHC3-211ENST00000486042 SULF1Q8IWU6 871 aa9.8□□□□□ -0.84
PHC3-211ENST00000486042 PRDM9Q9NQV7 894 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms