RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
GCFC2-209ENST00000486016 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
GCFC2-209ENST00000486016 COPS2P61201 443 aa11.34□□□□□ -0.59
GCFC2-209ENST00000486016 ADGRG1Q9Y653 693 aa11.34□□□□□ -0.59
GCFC2-209ENST00000486016 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
GCFC2-209ENST00000486016 FCHSD2O94868 740 aa11.32□□□□□ -0.6
GCFC2-209ENST00000486016 RBM26Q5T8P6 1007 aaKnown RBP11.31□□□□□ -0.6
GCFC2-209ENST00000486016 SLF2Q8IX21 1173 aa11.3□□□□□ -0.6
GCFC2-209ENST00000486016 GPR37O15354 613 aa11.29□□□□□ -0.6
GCFC2-209ENST00000486016 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
GCFC2-209ENST00000486016 DNAJB2P25686 324 aa11.27□□□□□ -0.61
GCFC2-209ENST00000486016 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.61
GCFC2-209ENST00000486016 TMEM134Q9H6X4 195 aa11.27□□□□□ -0.61
GCFC2-209ENST00000486016 HIC1Q14526 733 aa11.26□□□□□ -0.61
GCFC2-209ENST00000486016 SMYD5Q6GMV2 418 aa11.26□□□□□ -0.61
GCFC2-209ENST00000486016 VSIG10Q8N0Z9 540 aa11.26□□□□□ -0.61
GCFC2-209ENST00000486016 RCCD1A6NED2 376 aa11.25□□□□□ -0.61
GCFC2-209ENST00000486016 ZPR1O75312 459 aa11.25□□□□□ -0.61
GCFC2-209ENST00000486016 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
GCFC2-209ENST00000486016 FECHP22830 423 aa11.24□□□□□ -0.61
GCFC2-209ENST00000486016 SLC4A3P48751 1232 aa11.24□□□□□ -0.61
GCFC2-209ENST00000486016 SLC19A1P41440 591 aa11.23□□□□□ -0.61
GCFC2-209ENST00000486016 PKDCCQ504Y2 493 aa11.23□□□□□ -0.61
GCFC2-209ENST00000486016 PXYLP1Q8TE99 480 aa11.23□□□□□ -0.61
GCFC2-209ENST00000486016 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
GCFC2-209ENST00000486016 MYT1Q01538 1121 aa11.21□□□□□ -0.61
GCFC2-209ENST00000486016 POTECB2RU33 542 aa11.2□□□□□ -0.62
GCFC2-209ENST00000486016 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
GCFC2-209ENST00000486016 GNPATO15228 680 aa11.2□□□□□ -0.62
GCFC2-209ENST00000486016 EMID1Q96A84 441 aaPredicted RBP11.2□□□□□ -0.62
GCFC2-209ENST00000486016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.19□□□□□ -0.62
GCFC2-209ENST00000486016 OATP04181 439 aa11.19□□□□□ -0.62
GCFC2-209ENST00000486016 METTL3Q86U44 580 aaKnown RBP11.19□□□□□ -0.62
GCFC2-209ENST00000486016 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
GCFC2-209ENST00000486016 DGAT1O75907 488 aa11.18□□□□□ -0.62
GCFC2-209ENST00000486016 SLC10A3P09131 477 aa11.17□□□□□ -0.62
GCFC2-209ENST00000486016 PRR20EP86478 221 aa11.17□□□□□ -0.62
GCFC2-209ENST00000486016 PRR20CP86479 221 aa11.17□□□□□ -0.62
GCFC2-209ENST00000486016 PRR20DP86480 221 aa11.17□□□□□ -0.62
GCFC2-209ENST00000486016 PRR20BP86481 221 aa11.17□□□□□ -0.62
GCFC2-209ENST00000486016 PRR20AP86496 221 aa11.17□□□□□ -0.62
GCFC2-209ENST00000486016 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
GCFC2-209ENST00000486016 BLOC1S3Q6QNY0 202 aa11.16□□□□□ -0.62
GCFC2-209ENST00000486016 ZNF598Q86UK7 904 aaKnown RBP11.15□□□□□ -0.62
GCFC2-209ENST00000486016 PPEF1O14829 653 aaPredicted RBP11.13□□□□□ -0.63
GCFC2-209ENST00000486016 ACTN4O43707 911 aaKnown RBP11.13□□□□□ -0.63
GCFC2-209ENST00000486016 TLL1O43897 1013 aa11.13□□□□□ -0.63
GCFC2-209ENST00000486016 ANKLE1Q8NAG6 615 aa11.13□□□□□ -0.63
GCFC2-209ENST00000486016 FAM187AA6NFU0 413 aa11.12□□□□□ -0.63
GCFC2-209ENST00000486016 PHOX2BQ99453 314 aa11.12□□□□□ -0.63
GCFC2-209ENST00000486016 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
GCFC2-209ENST00000486016 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
GCFC2-209ENST00000486016 TNFRSF10AO00220 468 aa11.1□□□□□ -0.63
GCFC2-209ENST00000486016 CFHP08603 1231 aa11.1□□□□□ -0.63
GCFC2-209ENST00000486016 GPIHBP1Q8IV16 184 aa11.1□□□□□ -0.63
GCFC2-209ENST00000486016 S1PR4O95977 384 aa11.09□□□□□ -0.63
GCFC2-209ENST00000486016 KMT5BQ4FZB7 885 aa11.07□□□□□ -0.64
GCFC2-209ENST00000486016 DAXXQ9UER7 740 aaPredicted RBP11.07□□□□□ -0.64
GCFC2-209ENST00000486016 ST8SIA5O15466 376 aa11.06□□□□□ -0.64
GCFC2-209ENST00000486016 GDF9O60383 454 aa11.06□□□□□ -0.64
GCFC2-209ENST00000486016 NLRP7Q8WX94 980 aa11.06□□□□□ -0.64
GCFC2-209ENST00000486016 TREML4Q6UXN2 200 aa11.05□□□□□ -0.64
GCFC2-209ENST00000486016 ADH1BP00325 375 aa11.02□□□□□ -0.65
GCFC2-209ENST00000486016 AAASQ9NRG9 546 aa11.02□□□□□ -0.65
GCFC2-209ENST00000486016 MAP2K5Q13163 448 aa11□□□□□ -0.65
GCFC2-209ENST00000486016 LCE2AQ5TA79 106 aaPredicted RBP11□□□□□ -0.65
GCFC2-209ENST00000486016 PLA2G2CQ5R387 149 aa10.99□□□□□ -0.65
GCFC2-209ENST00000486016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.99□□□□□ -0.65
GCFC2-209ENST00000486016 SCUBE3Q8IX30 993 aa10.99□□□□□ -0.65
GCFC2-209ENST00000486016 IRF6O14896 467 aa10.98□□□□□ -0.65
GCFC2-209ENST00000486016 NR1I2O75469 434 aa10.98□□□□□ -0.65
GCFC2-209ENST00000486016 PUS10Q3MIT2 529 aaKnown RBP10.98□□□□□ -0.65
GCFC2-209ENST00000486016 RSPH4AQ5TD94 716 aa10.98□□□□□ -0.65
GCFC2-209ENST00000486016 DDX11L8A8MPP1 907 aa10.97□□□□□ -0.65
GCFC2-209ENST00000486016 GCGRP47871 477 aa10.97□□□□□ -0.65
GCFC2-209ENST00000486016 FOXC1Q12948 553 aa10.97□□□□□ -0.65
GCFC2-209ENST00000486016 LMOD2Q6P5Q4 547 aa10.97□□□□□ -0.65
GCFC2-209ENST00000486016 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
GCFC2-209ENST00000486016 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
GCFC2-209ENST00000486016 TULP1O00294 542 aaPredicted RBP10.95□□□□□ -0.66
GCFC2-209ENST00000486016 FUT2Q10981 343 aa10.95□□□□□ -0.66
GCFC2-209ENST00000486016 MORN1Q5T089 497 aa10.95□□□□□ -0.66
GCFC2-209ENST00000486016 SULF1Q8IWU6 871 aa10.95□□□□□ -0.66
GCFC2-209ENST00000486016 RDH13Q8NBN7 331 aa10.95□□□□□ -0.66
GCFC2-209ENST00000486016 DACH1Q9UI36 760 aa10.94□□□□□ -0.66
GCFC2-209ENST00000486016 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
GCFC2-209ENST00000486016 THAP11Q96EK4 314 aa10.93□□□□□ -0.66
GCFC2-209ENST00000486016 PKD2L1Q9P0L9 805 aa10.93□□□□□ -0.66
GCFC2-209ENST00000486016 CD46P15529 392 aa10.91□□□□□ -0.66
GCFC2-209ENST00000486016 ATP6V1AP38606 617 aa10.91□□□□□ -0.66
GCFC2-209ENST00000486016 WFS1O76024 890 aa10.9□□□□□ -0.66
GCFC2-209ENST00000486016 CCDC102AQ96A19 550 aa10.9□□□□□ -0.66
GCFC2-209ENST00000486016 SPSB2Q99619 263 aa10.89□□□□□ -0.67
GCFC2-209ENST00000486016 GMPR2Q9P2T1 348 aaKnown RBP10.89□□□□□ -0.67
GCFC2-209ENST00000486016 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
GCFC2-209ENST00000486016 AVPP01185 164 aa10.88□□□□□ -0.67
GCFC2-209ENST00000486016 RPIAP49247 311 aa10.88□□□□□ -0.67
GCFC2-209ENST00000486016 SALL2Q9Y467 1007 aaPredicted RBP10.88□□□□□ -0.67
GCFC2-209ENST00000486016 C11orf95C9JLR9 678 aaPredicted RBP10.87□□□□□ -0.67
GCFC2-209ENST00000486016 AXIN1O15169 862 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms