RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 LAMC1P11047 1609 aa30.36■■■□□ 2.45
CDK5-204ENST00000485972 KIF7Q2M1P5 1343 aa30.34■■■□□ 2.45
CDK5-204ENST00000485972 IFT172Q9UG01 1749 aa30.33■■■□□ 2.45
CDK5-204ENST00000485972 NRXN1Q9ULB1 1477 aa30.32■■■□□ 2.44
CDK5-204ENST00000485972 SPATA31D1Q6ZQQ2 1576 aa30.3■■■□□ 2.44
CDK5-204ENST00000485972 CFAP70Q5T0N1 1121 aa30.29■■■□□ 2.44
CDK5-204ENST00000485972 VGFO15240 615 aaPredicted RBP30.27■■■□□ 2.44
CDK5-204ENST00000485972 PPLO60437 1756 aa30.25■■■□□ 2.43
CDK5-204ENST00000485972 STAG3Q9UJ98 1225 aa30.25■■■□□ 2.43
CDK5-204ENST00000485972 KIAA1210Q9ULL0 1709 aa30.25■■■□□ 2.43
CDK5-204ENST00000485972 TMEM131LA2VDJ0 1609 aa30.24■■■□□ 2.43
CDK5-204ENST00000485972 PIK3C2GO75747 1445 aa30.23■■■□□ 2.43
CDK5-204ENST00000485972 NEXMIFQ5QGS0 1516 aa30.23■■■□□ 2.43
CDK5-204ENST00000485972 NUTM2DQ5VT03 806 aaPredicted RBP30.22■■■□□ 2.43
CDK5-204ENST00000485972 SCAF11Q99590 1463 aaKnown RBP30.21■■■□□ 2.43
CDK5-204ENST00000485972 POLR3GLQ9BT43 218 aa30.21■■■□□ 2.43
CDK5-204ENST00000485972 ANP32CO43423 234 aa30.2■■■□□ 2.43
CDK5-204ENST00000485972 POLR1AO95602 1720 aaPredicted RBP30.2■■■□□ 2.43
CDK5-204ENST00000485972 C14orf93Q9H972 538 aaKnown RBP30.2■■■□□ 2.42
CDK5-204ENST00000485972 TESK2Q96S53 571 aa30.18■■■□□ 2.42
CDK5-204ENST00000485972 ZFYVE9O95405 1425 aa30.18■■■□□ 2.42
CDK5-204ENST00000485972 TNRQ92752 1358 aa30.17■■■□□ 2.42
CDK5-204ENST00000485972 IQGAP1P46940 1657 aa30.14■■■□□ 2.42
CDK5-204ENST00000485972 EIF3AQ14152 1382 aaKnown RBP30.14■■■□□ 2.42
CDK5-204ENST00000485972 A2ML1A8K2U0 1454 aa30.13■■■□□ 2.41
CDK5-204ENST00000485972 MYO5BQ9ULV0 1848 aa30.11■■■□□ 2.41
CDK5-204ENST00000485972 CEBPAP49715 358 aaPredicted RBP30.1■■■□□ 2.41
CDK5-204ENST00000485972 TMF1P82094 1093 aa30.1■■■□□ 2.41
CDK5-204ENST00000485972 SETBP1Q9Y6X0 1596 aa30.1■■■□□ 2.41
CDK5-204ENST00000485972 TMEM132EQ6IEE7 984 aa30.06■■■□□ 2.4
CDK5-204ENST00000485972 DISP3Q9P2K9 1392 aa30.06■■■□□ 2.4
CDK5-204ENST00000485972 ADGRB1O14514 1584 aa30.05■■■□□ 2.4
CDK5-204ENST00000485972 RIMS2Q9UQ26 1411 aa30.04■■■□□ 2.4
CDK5-204ENST00000485972 FER1L4A9Z1Z3 1794 aa30.03■■■□□ 2.4
CDK5-204ENST00000485972 PLPPR3Q6T4P5 718 aa30.01■■■□□ 2.39
CDK5-204ENST00000485972 TRAK1Q9UPV9 953 aa30.01■■■□□ 2.39
CDK5-204ENST00000485972 CCER2I3L3R5 266 aa30■■■□□ 2.39
CDK5-204ENST00000485972 SLC24A1O60721 1099 aa30■■■□□ 2.39
CDK5-204ENST00000485972 SENP3Q9H4L4 574 aaPredicted RBP30■■■□□ 2.39
CDK5-204ENST00000485972 ABCF1Q8NE71 845 aaKnown RBP eCLIP30■■■□□ 2.39
CDK5-204ENST00000485972 YTHDC1Q96MU7 727 aaKnown RBP30■■■□□ 2.39
CDK5-204ENST00000485972 C3P01024 1663 aa29.99■■■□□ 2.39
CDK5-204ENST00000485972 NLRP1Q9C000 1473 aa29.98■■■□□ 2.39
CDK5-204ENST00000485972 HDGFP51858 240 aaKnown RBP29.98■■■□□ 2.39
CDK5-204ENST00000485972 CDCA8Q53HL2 280 aa29.98■■■□□ 2.39
CDK5-204ENST00000485972 CENPJQ9HC77 1338 aaPredicted RBP29.96■■■□□ 2.39
CDK5-204ENST00000485972 PRKRIP1Q9H875 184 aaPredicted RBP29.92■■■□□ 2.38
CDK5-204ENST00000485972 KDM5AP29375 1690 aaKnown RBP29.92■■■□□ 2.38
CDK5-204ENST00000485972 TMEM2Q9UHN6 1383 aa29.91■■■□□ 2.38
CDK5-204ENST00000485972 SBNO2Q9Y2G9 1366 aa29.9■■■□□ 2.38
CDK5-204ENST00000485972 MYO3AQ8NEV4 1616 aa29.89■■■□□ 2.38
CDK5-204ENST00000485972 ALKQ9UM73 1620 aa29.89■■■□□ 2.38
CDK5-204ENST00000485972 UBR1Q8IWV7 1749 aa29.89■■■□□ 2.37
CDK5-204ENST00000485972 STK26Q9P289 416 aa29.88■■■□□ 2.37
CDK5-204ENST00000485972 ASXL1Q8IXJ9 1541 aa29.88■■■□□ 2.37
CDK5-204ENST00000485972 YTHDC2Q9H6S0 1430 aaKnown RBP29.83■■■□□ 2.37
CDK5-204ENST00000485972 RIMS1Q86UR5 1692 aaKnown RBP29.83■■■□□ 2.37
CDK5-204ENST00000485972 CENPBP07199 599 aaPredicted RBP29.82■■■□□ 2.36
CDK5-204ENST00000485972 PANK3Q9H999 370 aa29.82■■■□□ 2.36
CDK5-204ENST00000485972 ADAMTSL3P82987 1691 aa29.82■■■□□ 2.36
CDK5-204ENST00000485972 PTPRMP28827 1452 aa29.8■■■□□ 2.36
CDK5-204ENST00000485972 CNGB1Q14028 1251 aaPredicted RBP29.8■■■□□ 2.36
CDK5-204ENST00000485972 THEMISQ8N1K5 641 aaPredicted RBP29.8■■■□□ 2.36
CDK5-204ENST00000485972 BCANQ96GW7 911 aa29.8■■■□□ 2.36
CDK5-204ENST00000485972 PER1O15534 1290 aaPredicted RBP29.79■■■□□ 2.36
CDK5-204ENST00000485972 TXNDC2Q86VQ3 553 aa29.78■■■□□ 2.36
CDK5-204ENST00000485972 EID1Q9Y6B2 187 aa29.78■■■□□ 2.36
CDK5-204ENST00000485972 LTKP29376 864 aa29.77■■■□□ 2.36
CDK5-204ENST00000485972 QRICH2Q9H0J4 1663 aa29.77■■■□□ 2.36
CDK5-204ENST00000485972 ARHGEF28Q8N1W1 1705 aaKnown RBP29.77■■■□□ 2.36
CDK5-204ENST00000485972 NRXN3Q9Y4C0 1643 aa29.75■■■□□ 2.35
CDK5-204ENST00000485972 PRAM1Q96QH2 718 aa29.75■■■□□ 2.35
CDK5-204ENST00000485972 POGKQ9P215 609 aa29.75■■■□□ 2.35
CDK5-204ENST00000485972 LRPPRCP42704 1394 aaKnown RBP29.74■■■□□ 2.35
CDK5-204ENST00000485972 SAFB2Q14151 953 aaKnown RBP eCLIP29.74■■■□□ 2.35
CDK5-204ENST00000485972 SLIT1O75093 1534 aa29.73■■■□□ 2.35
CDK5-204ENST00000485972 PLEKHG1Q9ULL1 1385 aa29.73■■■□□ 2.35
CDK5-204ENST00000485972 ARHGAP23Q9P227 1491 aa29.72■■■□□ 2.35
CDK5-204ENST00000485972 EVC2Q86UK5 1308 aa29.72■■■□□ 2.35
CDK5-204ENST00000485972 METP08581 1390 aa29.72■■■□□ 2.35
CDK5-204ENST00000485972 ABCC11Q96J66 1382 aa29.7■■■□□ 2.35
CDK5-204ENST00000485972 SETD1AO15047 1707 aaKnown RBP29.7■■■□□ 2.35
CDK5-204ENST00000485972 KTN1Q86UP2 1357 aaKnown RBP29.69■■■□□ 2.34
CDK5-204ENST00000485972 RALBP1Q15311 655 aa29.69■■■□□ 2.34
CDK5-204ENST00000485972 PUS7Q96PZ0 661 aaKnown RBP29.68■■■□□ 2.34
CDK5-204ENST00000485972 CCDC184Q52MB2 194 aa29.67■■■□□ 2.34
CDK5-204ENST00000485972 KNSTRNQ9Y448 316 aa29.67■■■□□ 2.34
CDK5-204ENST00000485972 CEP170BQ9Y4F5 1589 aaPredicted RBP29.66■■■□□ 2.34
CDK5-204ENST00000485972 DLC1Q96QB1 1528 aa29.66■■■□□ 2.34
CDK5-204ENST00000485972 ADAMTS13Q76LX8 1427 aa29.66■■■□□ 2.34
CDK5-204ENST00000485972 MRS2Q9HD23 443 aa29.66■■■□□ 2.34
CDK5-204ENST00000485972 MYOM1P52179 1685 aa29.64■■■□□ 2.34
CDK5-204ENST00000485972 MINK1Q8N4C8 1332 aaPredicted RBP29.64■■■□□ 2.34
CDK5-204ENST00000485972 TULP4Q9NRJ4 1543 aa29.63■■■□□ 2.33
CDK5-204ENST00000485972 WAPLQ7Z5K2 1190 aa29.62■■■□□ 2.33
CDK5-204ENST00000485972 TMC1Q8TDI8 760 aa29.62■■■□□ 2.33
CDK5-204ENST00000485972 CC2D1BQ5T0F9 858 aaKnown RBP29.61■■■□□ 2.33
CDK5-204ENST00000485972 SLC26A8Q96RN1 970 aa29.6■■■□□ 2.33
CDK5-204ENST00000485972 CABP2Q9NPB3 220 aa29.6■■■□□ 2.33
CDK5-204ENST00000485972 PARD3Q8TEW0 1356 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms