RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 KCNV2Q8TDN2 545 aa7.5□□□□□ -1.21
PRPF38B-205ENST00000485810 ADGRG1Q9Y653 693 aa7.5□□□□□ -1.21
PRPF38B-205ENST00000485810 TLL1O43897 1013 aa7.49□□□□□ -1.21
PRPF38B-205ENST00000485810 ARHGEF1Q92888 912 aaKnown RBP7.49□□□□□ -1.21
PRPF38B-205ENST00000485810 PCDHB3Q9Y5E6 796 aa7.49□□□□□ -1.21
PRPF38B-205ENST00000485810 TMEM134Q9H6X4 195 aa7.48□□□□□ -1.21
PRPF38B-205ENST00000485810 PPEF1O14829 653 aaPredicted RBP7.47□□□□□ -1.21
PRPF38B-205ENST00000485810 DNAJB2P25686 324 aa7.47□□□□□ -1.21
PRPF38B-205ENST00000485810 NECTIN2Q92692 538 aa7.47□□□□□ -1.21
PRPF38B-205ENST00000485810 SLC10A3P09131 477 aa7.46□□□□□ -1.21
PRPF38B-205ENST00000485810 GGCXP38435 758 aa7.46□□□□□ -1.21
PRPF38B-205ENST00000485810 RCCD1A6NED2 376 aa7.46□□□□□ -1.22
PRPF38B-205ENST00000485810 SLC19A1P41440 591 aa7.46□□□□□ -1.22
PRPF38B-205ENST00000485810 PLCB2Q00722 1185 aa7.46□□□□□ -1.22
PRPF38B-205ENST00000485810 ZNF787Q6DD87 383 aa7.46□□□□□ -1.22
PRPF38B-205ENST00000485810 LIAT1Q6ZQX7 453 aa7.46□□□□□ -1.22
PRPF38B-205ENST00000485810 ACTN4O43707 911 aaKnown RBP7.45□□□□□ -1.22
PRPF38B-205ENST00000485810 SPRYD7Q5W111 196 aa7.45□□□□□ -1.22
PRPF38B-205ENST00000485810 S1PR4O95977 384 aa7.44□□□□□ -1.22
PRPF38B-205ENST00000485810 PLA2G2CQ5R387 149 aa7.43□□□□□ -1.22
PRPF38B-205ENST00000485810 ANKLE1Q8NAG6 615 aa7.43□□□□□ -1.22
PRPF38B-205ENST00000485810 RBM46Q8TBY0 533 aaKnown RBP7.43□□□□□ -1.22
PRPF38B-205ENST00000485810 PRR14Q9BWN1 585 aa7.43□□□□□ -1.22
PRPF38B-205ENST00000485810 POTECB2RU33 542 aa7.42□□□□□ -1.22
PRPF38B-205ENST00000485810 CFHP08603 1231 aa7.42□□□□□ -1.22
PRPF38B-205ENST00000485810 MYT1Q01538 1121 aa7.42□□□□□ -1.22
PRPF38B-205ENST00000485810 ZNF775Q96BV0 537 aaPredicted RBP7.42□□□□□ -1.22
PRPF38B-205ENST00000485810 GDF9O60383 454 aa7.41□□□□□ -1.22
PRPF38B-205ENST00000485810 ZNF598Q86UK7 904 aaKnown RBP7.41□□□□□ -1.22
PRPF38B-205ENST00000485810 NUTM2FA1L443 756 aa7.4□□□□□ -1.22
PRPF38B-205ENST00000485810 SLC4A3P48751 1232 aa7.4□□□□□ -1.22
PRPF38B-205ENST00000485810 PRR20EP86478 221 aa7.4□□□□□ -1.22
PRPF38B-205ENST00000485810 PRR20CP86479 221 aa7.4□□□□□ -1.22
PRPF38B-205ENST00000485810 PRR20DP86480 221 aa7.4□□□□□ -1.22
PRPF38B-205ENST00000485810 PRR20BP86481 221 aa7.4□□□□□ -1.22
PRPF38B-205ENST00000485810 PRR20AP86496 221 aa7.4□□□□□ -1.22
PRPF38B-205ENST00000485810 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.22
PRPF38B-205ENST00000485810 SEMA3EO15041 775 aa7.39□□□□□ -1.23
PRPF38B-205ENST00000485810 HAP1P54257 671 aaPredicted RBP7.39□□□□□ -1.23
PRPF38B-205ENST00000485810 ADH1BP00325 375 aa7.38□□□□□ -1.23
PRPF38B-205ENST00000485810 KMT5BQ4FZB7 885 aa7.38□□□□□ -1.23
PRPF38B-205ENST00000485810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.37□□□□□ -1.23
PRPF38B-205ENST00000485810 DGAT1O75907 488 aa7.37□□□□□ -1.23
PRPF38B-205ENST00000485810 FCHSD2O94868 740 aa7.37□□□□□ -1.23
PRPF38B-205ENST00000485810 ZNF697Q5TEC3 545 aa7.37□□□□□ -1.23
PRPF38B-205ENST00000485810 PUS10Q3MIT2 529 aaKnown RBP7.36□□□□□ -1.23
PRPF38B-205ENST00000485810 SCUBE3Q8IX30 993 aa7.36□□□□□ -1.23
PRPF38B-205ENST00000485810 FECHP22830 423 aa7.35□□□□□ -1.23
PRPF38B-205ENST00000485810 PKD2L1Q9P0L9 805 aa7.35□□□□□ -1.23
PRPF38B-205ENST00000485810 DAXXQ9UER7 740 aaPredicted RBP7.35□□□□□ -1.23
PRPF38B-205ENST00000485810 TNFRSF10AO00220 468 aa7.34□□□□□ -1.23
PRPF38B-205ENST00000485810 NR1I2O75469 434 aa7.34□□□□□ -1.23
PRPF38B-205ENST00000485810 SLC6A16Q9GZN6 736 aa7.34□□□□□ -1.23
PRPF38B-205ENST00000485810 GPR37O15354 613 aa7.33□□□□□ -1.24
PRPF38B-205ENST00000485810 PKDCCQ504Y2 493 aa7.33□□□□□ -1.24
PRPF38B-205ENST00000485810 METTL3Q86U44 580 aaKnown RBP7.33□□□□□ -1.24
PRPF38B-205ENST00000485810 KDM2AQ9Y2K7 1162 aa7.33□□□□□ -1.24
PRPF38B-205ENST00000485810 FAM187AA6NFU0 413 aa7.32□□□□□ -1.24
PRPF38B-205ENST00000485810 ST8SIA5O15466 376 aa7.32□□□□□ -1.24
PRPF38B-205ENST00000485810 OATP04181 439 aa7.32□□□□□ -1.24
PRPF38B-205ENST00000485810 RBM26Q5T8P6 1007 aaKnown RBP7.32□□□□□ -1.24
PRPF38B-205ENST00000485810 NLRP7Q8WX94 980 aa7.32□□□□□ -1.24
PRPF38B-205ENST00000485810 THAP11Q96EK4 314 aa7.32□□□□□ -1.24
PRPF38B-205ENST00000485810 TESPA1A2RU30 521 aaPredicted RBP7.31□□□□□ -1.24
PRPF38B-205ENST00000485810 MORN1Q5T089 497 aa7.31□□□□□ -1.24
PRPF38B-205ENST00000485810 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
PRPF38B-205ENST00000485810 FAM160A2Q8N612 972 aaPredicted RBP7.31□□□□□ -1.24
PRPF38B-205ENST00000485810 AAASQ9NRG9 546 aa7.31□□□□□ -1.24
PRPF38B-205ENST00000485810 HIC1Q14526 733 aa7.3□□□□□ -1.24
PRPF38B-205ENST00000485810 SPSB2Q99619 263 aa7.3□□□□□ -1.24
PRPF38B-205ENST00000485810 DACH1Q9UI36 760 aa7.3□□□□□ -1.24
PRPF38B-205ENST00000485810 PHOX2BQ99453 314 aa7.29□□□□□ -1.24
PRPF38B-205ENST00000485810 FUT2Q10981 343 aa7.27□□□□□ -1.25
PRPF38B-205ENST00000485810 FOXC1Q12948 553 aa7.27□□□□□ -1.25
PRPF38B-205ENST00000485810 TOR4AQ9NXH8 423 aa7.27□□□□□ -1.25
PRPF38B-205ENST00000485810 GNPATO15228 680 aa7.26□□□□□ -1.25
PRPF38B-205ENST00000485810 P3H3Q8IVL6 736 aa7.26□□□□□ -1.25
PRPF38B-205ENST00000485810 PRDM9Q9NQV7 894 aa7.26□□□□□ -1.25
PRPF38B-205ENST00000485810 SLC27A5Q9Y2P5 690 aa7.26□□□□□ -1.25
PRPF38B-205ENST00000485810 RPIAP49247 311 aa7.25□□□□□ -1.25
PRPF38B-205ENST00000485810 FCF1Q9Y324 198 aaKnown RBP7.25□□□□□ -1.25
PRPF38B-205ENST00000485810 DDX11L8A8MPP1 907 aa7.24□□□□□ -1.25
PRPF38B-205ENST00000485810 AVPP01185 164 aa7.24□□□□□ -1.25
PRPF38B-205ENST00000485810 GCGRP47871 477 aa7.24□□□□□ -1.25
PRPF38B-205ENST00000485810 BRICD5Q6PL45 260 aa7.24□□□□□ -1.25
PRPF38B-205ENST00000485810 ATP6V1AP38606 617 aa7.23□□□□□ -1.25
PRPF38B-205ENST00000485810 LMOD2Q6P5Q4 547 aa7.23□□□□□ -1.25
PRPF38B-205ENST00000485810 TREML4Q6UXN2 200 aa7.23□□□□□ -1.25
PRPF38B-205ENST00000485810 CRIPAKQ8N1N5 446 aa7.23□□□□□ -1.25
PRPF38B-205ENST00000485810 RDH13Q8NBN7 331 aa7.23□□□□□ -1.25
PRPF38B-205ENST00000485810 RSPH4AQ5TD94 716 aa7.22□□□□□ -1.25
PRPF38B-205ENST00000485810 RNF19BQ6ZMZ0 732 aa7.21□□□□□ -1.25
PRPF38B-205ENST00000485810 SALL2Q9Y467 1007 aaPredicted RBP7.21□□□□□ -1.25
PRPF38B-205ENST00000485810 FMNL1O95466 1100 aaPredicted RBP7.2□□□□□ -1.26
PRPF38B-205ENST00000485810 GMPR2Q9P2T1 348 aaKnown RBP7.2□□□□□ -1.26
PRPF38B-205ENST00000485810 CD2BP2O95400 341 aaKnown RBP7.19□□□□□ -1.26
PRPF38B-205ENST00000485810 SMCPP49901 116 aaPredicted RBP7.18□□□□□ -1.26
PRPF38B-205ENST00000485810 MSS51Q4VC12 460 aa7.18□□□□□ -1.26
PRPF38B-205ENST00000485810 VSIG10Q8N0Z9 540 aa7.18□□□□□ -1.26
PRPF38B-205ENST00000485810 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms