RNA–Protein interactions for RNA: ENST00000485621.1

TRAPPC10-211, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-211ENST00000485621 FECHP22830 423 aa14.36□□□□□ -0.11
TRAPPC10-211ENST00000485621 COPS2P61201 443 aa14.36□□□□□ -0.11
TRAPPC10-211ENST00000485621 OATP04181 439 aa14.35□□□□□ -0.11
TRAPPC10-211ENST00000485621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.34□□□□□ -0.11
TRAPPC10-211ENST00000485621 PXYLP1Q8TE99 480 aa14.34□□□□□ -0.11
TRAPPC10-211ENST00000485621 GPR37O15354 613 aa14.33□□□□□ -0.12
TRAPPC10-211ENST00000485621 PRR14Q9BWN1 585 aa14.33□□□□□ -0.12
TRAPPC10-211ENST00000485621 GPIHBP1Q8IV16 184 aa14.32□□□□□ -0.12
TRAPPC10-211ENST00000485621 METTL3Q86U44 580 aaKnown RBP14.31□□□□□ -0.12
TRAPPC10-211ENST00000485621 PCDHB3Q9Y5E6 796 aa14.31□□□□□ -0.12
TRAPPC10-211ENST00000485621 CFHP08603 1231 aa14.28□□□□□ -0.12
TRAPPC10-211ENST00000485621 NKX2-3Q8TAU0 364 aa14.28□□□□□ -0.12
TRAPPC10-211ENST00000485621 IRX2Q9BZI1 471 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC10-211ENST00000485621 KMT5BQ4FZB7 885 aa14.27□□□□□ -0.13
TRAPPC10-211ENST00000485621 TULP1O00294 542 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC10-211ENST00000485621 PPP1R18Q6NYC8 613 aa14.26□□□□□ -0.13
TRAPPC10-211ENST00000485621 SLC10A3P09131 477 aa14.25□□□□□ -0.13
TRAPPC10-211ENST00000485621 BLOC1S3Q6QNY0 202 aa14.25□□□□□ -0.13
TRAPPC10-211ENST00000485621 ZPR1O75312 459 aa14.24□□□□□ -0.13
TRAPPC10-211ENST00000485621 NLRP7Q8WX94 980 aa14.23□□□□□ -0.13
TRAPPC10-211ENST00000485621 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.22□□□□□ -0.13
TRAPPC10-211ENST00000485621 ACTN4O43707 911 aaKnown RBP14.21□□□□□ -0.13
TRAPPC10-211ENST00000485621 RSPH4AQ5TD94 716 aa14.2□□□□□ -0.14
TRAPPC10-211ENST00000485621 DAXXQ9UER7 740 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC10-211ENST00000485621 GGCXP38435 758 aa14.17□□□□□ -0.14
TRAPPC10-211ENST00000485621 RDH13Q8NBN7 331 aa14.17□□□□□ -0.14
TRAPPC10-211ENST00000485621 PRKD2Q9BZL6 878 aa14.17□□□□□ -0.14
TRAPPC10-211ENST00000485621 TLL1O43897 1013 aa14.16□□□□□ -0.14
TRAPPC10-211ENST00000485621 DDX11L8A8MPP1 907 aa14.15□□□□□ -0.14
TRAPPC10-211ENST00000485621 PHOX2BQ99453 314 aa14.15□□□□□ -0.14
TRAPPC10-211ENST00000485621 NR1I2O75469 434 aa14.11□□□□□ -0.15
TRAPPC10-211ENST00000485621 PUS10Q3MIT2 529 aaKnown RBP14.11□□□□□ -0.15
TRAPPC10-211ENST00000485621 MAP2K5Q13163 448 aa14.09□□□□□ -0.15
TRAPPC10-211ENST00000485621 TMUB1Q9BVT8 246 aa14.09□□□□□ -0.15
TRAPPC10-211ENST00000485621 SULF1Q8IWU6 871 aa14.08□□□□□ -0.16
TRAPPC10-211ENST00000485621 V9GY48 417 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC10-211ENST00000485621 RNF223E7ERA6 249 aa14.06□□□□□ -0.16
TRAPPC10-211ENST00000485621 SCUBE3Q8IX30 993 aa14.06□□□□□ -0.16
TRAPPC10-211ENST00000485621 IRF6O14896 467 aa14.05□□□□□ -0.16
TRAPPC10-211ENST00000485621 S1PR4O95977 384 aa14.05□□□□□ -0.16
TRAPPC10-211ENST00000485621 ADH1BP00325 375 aa14.04□□□□□ -0.16
TRAPPC10-211ENST00000485621 FUT2Q10981 343 aa14.04□□□□□ -0.16
TRAPPC10-211ENST00000485621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRAPPC10-211ENST00000485621 Q6ZNB5 142 aa14.03□□□□□ -0.16
TRAPPC10-211ENST00000485621 MINK1Q8N4C8 1332 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC10-211ENST00000485621 PPEF1O14829 653 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC10-211ENST00000485621 GFRA3O60609 400 aa14.01□□□□□ -0.17
TRAPPC10-211ENST00000485621 GCGRP47871 477 aa14.01□□□□□ -0.17
TRAPPC10-211ENST00000485621 ATP6V1AP38606 617 aa14□□□□□ -0.17
TRAPPC10-211ENST00000485621 MDM2Q00987 491 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC10-211ENST00000485621 MORN1Q5T089 497 aa13.99□□□□□ -0.17
TRAPPC10-211ENST00000485621 LMOD2Q6P5Q4 547 aa13.99□□□□□ -0.17
TRAPPC10-211ENST00000485621 CCDC102AQ96A19 550 aa13.99□□□□□ -0.17
TRAPPC10-211ENST00000485621 SPSB2Q99619 263 aa13.99□□□□□ -0.17
TRAPPC10-211ENST00000485621 SLC6A16Q9GZN6 736 aa13.99□□□□□ -0.17
TRAPPC10-211ENST00000485621 LAPTM4AQ15012 233 aa13.98□□□□□ -0.17
TRAPPC10-211ENST00000485621 ANKLE1Q8NAG6 615 aa13.98□□□□□ -0.17
TRAPPC10-211ENST00000485621 SLC19A1P41440 591 aa13.96□□□□□ -0.17
TRAPPC10-211ENST00000485621 SLC27A5Q9Y2P5 690 aa13.95□□□□□ -0.18
TRAPPC10-211ENST00000485621 CD46P15529 392 aa13.92□□□□□ -0.18
TRAPPC10-211ENST00000485621 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
TRAPPC10-211ENST00000485621 EMID1Q96A84 441 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC10-211ENST00000485621 PDZRN3Q9UPQ7 1066 aa13.92□□□□□ -0.18
TRAPPC10-211ENST00000485621 FMNL1O95466 1100 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC10-211ENST00000485621 GRIPAP1Q4V328 841 aa13.91□□□□□ -0.18
TRAPPC10-211ENST00000485621 NRG2O14511 850 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC10-211ENST00000485621 THAP11Q96EK4 314 aa13.9□□□□□ -0.18
TRAPPC10-211ENST00000485621 LIAT1Q6ZQX7 453 aa13.89□□□□□ -0.19
TRAPPC10-211ENST00000485621 KDM4AO75164 1064 aa13.87□□□□□ -0.19
TRAPPC10-211ENST00000485621 SPRYD7Q5W111 196 aa13.87□□□□□ -0.19
TRAPPC10-211ENST00000485621 GPCPD1Q9NPB8 672 aa13.87□□□□□ -0.19
TRAPPC10-211ENST00000485621 CLCN1P35523 988 aa13.86□□□□□ -0.19
TRAPPC10-211ENST00000485621 PLA2G2CQ5R387 149 aa13.86□□□□□ -0.19
TRAPPC10-211ENST00000485621 BRICD5Q6PL45 260 aa13.85□□□□□ -0.19
TRAPPC10-211ENST00000485621 RNF19BQ6ZMZ0 732 aa13.85□□□□□ -0.19
TRAPPC10-211ENST00000485621 FAM160A2Q8N612 972 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC10-211ENST00000485621 ZNF598Q86UK7 904 aaKnown RBP13.84□□□□□ -0.19
TRAPPC10-211ENST00000485621 SALL2Q9Y467 1007 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC10-211ENST00000485621 ZNF697Q5TEC3 545 aa13.83□□□□□ -0.2
TRAPPC10-211ENST00000485621 BARGINQ6ZT62 677 aa13.83□□□□□ -0.2
TRAPPC10-211ENST00000485621 ZC3H15Q8WU90 426 aaKnown RBP13.83□□□□□ -0.2
TRAPPC10-211ENST00000485621 PRDM9Q9NQV7 894 aa13.83□□□□□ -0.2
TRAPPC10-211ENST00000485621 FCF1Q9Y324 198 aaKnown RBP13.83□□□□□ -0.2
TRAPPC10-211ENST00000485621 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
TRAPPC10-211ENST00000485621 FAM217BQ9NTX9 383 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC10-211ENST00000485621 ZMYND10O75800 440 aa13.81□□□□□ -0.2
TRAPPC10-211ENST00000485621 Q3C1V9 767 aa13.81□□□□□ -0.2
TRAPPC10-211ENST00000485621 TRIM67Q6ZTA4 783 aa13.8□□□□□ -0.2
TRAPPC10-211ENST00000485621 HLA-CQ95604 372 aa13.8□□□□□ -0.2
TRAPPC10-211ENST00000485621 USP46P62068 366 aa13.79□□□□□ -0.2
TRAPPC10-211ENST00000485621 LCE2BO14633 110 aa13.78□□□□□ -0.2
TRAPPC10-211ENST00000485621 REPIN1Q9BWE0 567 aaKnown RBP13.78□□□□□ -0.2
TRAPPC10-211ENST00000485621 TTLL12Q14166 644 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC10-211ENST00000485621 MSS51Q4VC12 460 aa13.77□□□□□ -0.21
TRAPPC10-211ENST00000485621 HOXA2O43364 376 aa13.76□□□□□ -0.21
TRAPPC10-211ENST00000485621 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
TRAPPC10-211ENST00000485621 TNFRSF10AO00220 468 aa13.75□□□□□ -0.21
TRAPPC10-211ENST00000485621 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
TRAPPC10-211ENST00000485621 SSTR3P32745 418 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC10-211ENST00000485621 USB1Q9BQ65 265 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms