RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 NOS1P29475 1434 aa22.58■■□□□ 1.21
HLA-F-226ENST00000484704 TRIM52Q96A61 297 aa22.57■■□□□ 1.2
HLA-F-226ENST00000484704 TMEM94Q12767 1356 aa22.56■■□□□ 1.2
HLA-F-226ENST00000484704 CHGAP10645 457 aaKnown RBP22.56■■□□□ 1.2
HLA-F-226ENST00000484704 NAIPQ13075 1403 aa22.56■■□□□ 1.2
HLA-F-226ENST00000484704 XIRP1Q702N8 1843 aaKnown RBP22.55■■□□□ 1.2
HLA-F-226ENST00000484704 KCNA6P17658 529 aa22.55■■□□□ 1.2
HLA-F-226ENST00000484704 PROSER2Q86WR7 435 aaPredicted RBP22.54■■□□□ 1.2
HLA-F-226ENST00000484704 E9PCH4 1651 aa22.53■■□□□ 1.2
HLA-F-226ENST00000484704 HFM1A2PYH4 1435 aa22.53■■□□□ 1.2
HLA-F-226ENST00000484704 FAM135BQ49AJ0 1406 aa22.53■■□□□ 1.2
HLA-F-226ENST00000484704 BCANQ96GW7 911 aa22.51■■□□□ 1.19
HLA-F-226ENST00000484704 ADGRB3O60242 1522 aa22.51■■□□□ 1.19
HLA-F-226ENST00000484704 KDM5AP29375 1690 aaKnown RBP22.5■■□□□ 1.19
HLA-F-226ENST00000484704 POTEAQ6S8J7 498 aa22.5■■□□□ 1.19
HLA-F-226ENST00000484704 HDGFP51858 240 aaKnown RBP22.48■■□□□ 1.19
HLA-F-226ENST00000484704 PPP1R15AO75807 674 aaPredicted RBP22.47■■□□□ 1.19
HLA-F-226ENST00000484704 SLC4A1APQ9BWU0 796 aaKnown RBP22.42■■□□□ 1.18
HLA-F-226ENST00000484704 SPHKAPQ2M3C7 1700 aa22.41■■□□□ 1.18
HLA-F-226ENST00000484704 SLAIN2Q9P270 581 aa22.41■■□□□ 1.18
HLA-F-226ENST00000484704 MYO5BQ9ULV0 1848 aa22.41■■□□□ 1.18
HLA-F-226ENST00000484704 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
HLA-F-226ENST00000484704 RIMS2Q9UQ26 1411 aa22.4■■□□□ 1.18
HLA-F-226ENST00000484704 ROBO1Q9Y6N7 1651 aa22.39■■□□□ 1.17
HLA-F-226ENST00000484704 TMEM131LA2VDJ0 1609 aa22.39■■□□□ 1.17
HLA-F-226ENST00000484704 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
HLA-F-226ENST00000484704 MSH6P52701 1360 aa22.37■■□□□ 1.17
HLA-F-226ENST00000484704 NUTM2DQ5VT03 806 aaPredicted RBP22.36■■□□□ 1.17
HLA-F-226ENST00000484704 ZFYVE9O95405 1425 aa22.34■■□□□ 1.17
HLA-F-226ENST00000484704 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
HLA-F-226ENST00000484704 ACIN1Q9UKV3 1341 aaKnown RBP22.33■■□□□ 1.17
HLA-F-226ENST00000484704 PLEKHG1Q9ULL1 1385 aa22.33■■□□□ 1.17
HLA-F-226ENST00000484704 NWD1Q149M9 1564 aa22.33■■□□□ 1.16
HLA-F-226ENST00000484704 SETD5Q9C0A6 1442 aa22.32■■□□□ 1.16
HLA-F-226ENST00000484704 TRPM2O94759 1503 aa22.31■■□□□ 1.16
HLA-F-226ENST00000484704 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
HLA-F-226ENST00000484704 CLTCL1P53675 1640 aa22.28■■□□□ 1.16
HLA-F-226ENST00000484704 JCADQ9P266 1359 aa22.28■■□□□ 1.16
HLA-F-226ENST00000484704 KIF1BO60333 1816 aa22.27■■□□□ 1.16
HLA-F-226ENST00000484704 FOXD1Q16676 465 aa22.27■■□□□ 1.16
HLA-F-226ENST00000484704 C14orf37Q86TY3 774 aa22.27■■□□□ 1.16
HLA-F-226ENST00000484704 MPHOSPH9Q99550 1183 aa22.27■■□□□ 1.16
HLA-F-226ENST00000484704 PHLPP1O60346 1717 aa22.24■■□□□ 1.15
HLA-F-226ENST00000484704 CHD2O14647 1828 aaKnown RBP22.24■■□□□ 1.15
HLA-F-226ENST00000484704 RAB3GAP2Q9H2M9 1393 aa22.24■■□□□ 1.15
HLA-F-226ENST00000484704 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
HLA-F-226ENST00000484704 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
HLA-F-226ENST00000484704 CCDC144AA2RUR9 1427 aa22.21■■□□□ 1.15
HLA-F-226ENST00000484704 ATF3P18847 181 aa22.19■■□□□ 1.14
HLA-F-226ENST00000484704 CADPS2Q86UW7 1296 aa22.19■■□□□ 1.14
HLA-F-226ENST00000484704 AMOTL2Q9Y2J4 779 aa22.19■■□□□ 1.14
HLA-F-226ENST00000484704 NCOA3Q9Y6Q9 1424 aa22.19■■□□□ 1.14
HLA-F-226ENST00000484704 LRP6O75581 1613 aa22.19■■□□□ 1.14
HLA-F-226ENST00000484704 COL16A1Q07092 1604 aaPredicted RBP22.18■■□□□ 1.14
HLA-F-226ENST00000484704 DIP2AQ14689 1571 aa22.18■■□□□ 1.14
HLA-F-226ENST00000484704 MEX3CQ5U5Q3 659 aaKnown RBP22.17■■□□□ 1.14
HLA-F-226ENST00000484704 PTPRUQ92729 1446 aa22.16■■□□□ 1.14
HLA-F-226ENST00000484704 SPATA31A6Q5VVP1 1343 aa22.16■■□□□ 1.14
HLA-F-226ENST00000484704 SETD1AO15047 1707 aaKnown RBP22.16■■□□□ 1.14
HLA-F-226ENST00000484704 VGFO15240 615 aaPredicted RBP22.15■■□□□ 1.14
HLA-F-226ENST00000484704 BRINP3Q76B58 766 aa22.15■■□□□ 1.14
HLA-F-226ENST00000484704 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
HLA-F-226ENST00000484704 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
HLA-F-226ENST00000484704 PIK3R4Q99570 1358 aa22.13■■□□□ 1.13
HLA-F-226ENST00000484704 NUTM2BA6NNL0 878 aaPredicted RBP22.13■■□□□ 1.13
HLA-F-226ENST00000484704 NUTM2EB1AL46 878 aaPredicted RBP22.13■■□□□ 1.13
HLA-F-226ENST00000484704 RGL3Q3MIN7 710 aa22.13■■□□□ 1.13
HLA-F-226ENST00000484704 NUTM2AQ8IVF1 878 aaPredicted RBP22.13■■□□□ 1.13
HLA-F-226ENST00000484704 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.13■■□□□ 1.13
HLA-F-226ENST00000484704 ZNF772Q68DY9 489 aaPredicted RBP22.12■■□□□ 1.13
HLA-F-226ENST00000484704 SETBP1Q9Y6X0 1596 aa22.11■■□□□ 1.13
HLA-F-226ENST00000484704 UPF1Q92900 1129 aaKnown RBP eCLIP22.1■■□□□ 1.13
HLA-F-226ENST00000484704 AHDC1Q5TGY3 1603 aaPredicted RBP22.08■■□□□ 1.13
HLA-F-226ENST00000484704 HRCP23327 699 aa22.07■■□□□ 1.12
HLA-F-226ENST00000484704 NRXN3Q9Y4C0 1643 aa22.06■■□□□ 1.12
HLA-F-226ENST00000484704 RXRBP28702 533 aa22.06■■□□□ 1.12
HLA-F-226ENST00000484704 DDX17Q92841 729 aaKnown RBP22.06■■□□□ 1.12
HLA-F-226ENST00000484704 METP08581 1390 aa22.05■■□□□ 1.12
HLA-F-226ENST00000484704 PPLO60437 1756 aa22.04■■□□□ 1.12
HLA-F-226ENST00000484704 AFF2P51816 1311 aa22.02■■□□□ 1.12
HLA-F-226ENST00000484704 ANKRD30BQ9BXX2 1392 aa22.01■■□□□ 1.11
HLA-F-226ENST00000484704 MST1RQ04912 1400 aa22.01■■□□□ 1.11
HLA-F-226ENST00000484704 SPATA31E1Q6ZUB1 1445 aa22.01■■□□□ 1.11
HLA-F-226ENST00000484704 SHPRHQ149N8 1683 aa22.01■■□□□ 1.11
HLA-F-226ENST00000484704 ASXL1Q8IXJ9 1541 aa21.99■■□□□ 1.11
HLA-F-226ENST00000484704 DCCP43146 1447 aa21.98■■□□□ 1.11
HLA-F-226ENST00000484704 LRRC59Q96AG4 307 aaKnown RBP21.98■■□□□ 1.11
HLA-F-226ENST00000484704 ADGRF5Q8IZF2 1346 aa21.98■■□□□ 1.11
HLA-F-226ENST00000484704 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
HLA-F-226ENST00000484704 C8orf37Q96NL8 207 aa21.96■■□□□ 1.11
HLA-F-226ENST00000484704 QTRT2Q9H974 415 aaKnown RBP21.95■■□□□ 1.1
HLA-F-226ENST00000484704 IFT172Q9UG01 1749 aa21.93■■□□□ 1.1
HLA-F-226ENST00000484704 PNPLA6Q8IY17 1366 aa21.92■■□□□ 1.1
HLA-F-226ENST00000484704 ADGRL3Q9HAR2 1447 aa21.91■■□□□ 1.1
HLA-F-226ENST00000484704 ADAMTS2O95450 1211 aa21.91■■□□□ 1.1
HLA-F-226ENST00000484704 ORAI2Q96SN7 254 aa21.9■■□□□ 1.1
HLA-F-226ENST00000484704 STK26Q9P289 416 aa21.9■■□□□ 1.1
HLA-F-226ENST00000484704 CDK12Q9NYV4 1490 aaPredicted RBP21.89■■□□□ 1.09
HLA-F-226ENST00000484704 NHSL1Q5SYE7 1610 aa21.88■■□□□ 1.09
HLA-F-226ENST00000484704 RBM6P78332 1123 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms