RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 KCNC4Q03721 635 aa15.26■□□□□ 0.03
UBR3-210ENST00000484596 METTL3Q86U44 580 aaKnown RBP15.26■□□□□ 0.03
UBR3-210ENST00000484596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.25■□□□□ 0.03
UBR3-210ENST00000484596 NECTIN2Q92692 538 aa15.24■□□□□ 0.03
UBR3-210ENST00000484596 A0A0G2JS52 829 aa15.23■□□□□ 0.03
UBR3-210ENST00000484596 TJAP1Q5JTD0 557 aa15.22■□□□□ 0.03
UBR3-210ENST00000484596 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBR3-210ENST00000484596 MTRQ99707 1265 aa15.2■□□□□ 0.02
UBR3-210ENST00000484596 IL21Q9HBE4 155 aa15.16■□□□□ 0.02
UBR3-210ENST00000484596 NLRP7Q8WX94 980 aa15.15■□□□□ 0.02
UBR3-210ENST00000484596 PHOX2BQ99453 314 aa15.15■□□□□ 0.02
UBR3-210ENST00000484596 SLC10A3P09131 477 aa15.14■□□□□ 0.01
UBR3-210ENST00000484596 ZNF516Q92618 1163 aa15.13■□□□□ 0.01
UBR3-210ENST00000484596 PRR14Q9BWN1 585 aa15.13■□□□□ 0.01
UBR3-210ENST00000484596 COPS2P61201 443 aa15.11■□□□□ 0.01
UBR3-210ENST00000484596 MAP2K5Q13163 448 aa15.11■□□□□ 0.01
UBR3-210ENST00000484596 LMOD2Q6P5Q4 547 aa15.11■□□□□ 0.01
UBR3-210ENST00000484596 CFHP08603 1231 aa15.1■□□□□ 0.01
UBR3-210ENST00000484596 DAXXQ9UER7 740 aaPredicted RBP15.1■□□□□ 0.01
UBR3-210ENST00000484596 PCDHB3Q9Y5E6 796 aa15.09■□□□□ 0.01
UBR3-210ENST00000484596 IRF6O14896 467 aa15.08■□□□□ 0
UBR3-210ENST00000484596 KMT5BQ4FZB7 885 aa15.08■□□□□ 0
UBR3-210ENST00000484596 ACTN4O43707 911 aaKnown RBP15.07■□□□□ 0
UBR3-210ENST00000484596 RGS20O76081 388 aa15.07■□□□□ 0
UBR3-210ENST00000484596 MINK1Q8N4C8 1332 aaPredicted RBP15.05■□□□□ -0
UBR3-210ENST00000484596 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
UBR3-210ENST00000484596 BLOC1S3Q6QNY0 202 aa15.04■□□□□ -0
UBR3-210ENST00000484596 NKX2-3Q8TAU0 364 aa15.04■□□□□ -0
UBR3-210ENST00000484596 DDX11L8A8MPP1 907 aa15.03■□□□□ -0
UBR3-210ENST00000484596 ZPR1O75312 459 aa15.02■□□□□ -0
UBR3-210ENST00000484596 RDH13Q8NBN7 331 aa15.02■□□□□ -0
UBR3-210ENST00000484596 TPRNQ4KMQ1 711 aa15□□□□□ -0.01
UBR3-210ENST00000484596 CCDC102AQ96A19 550 aa15□□□□□ -0.01
UBR3-210ENST00000484596 PPP1R18Q6NYC8 613 aa14.98□□□□□ -0.01
UBR3-210ENST00000484596 SULF1Q8IWU6 871 aa14.97□□□□□ -0.01
UBR3-210ENST00000484596 ZC3H15Q8WU90 426 aaKnown RBP14.96□□□□□ -0.01
UBR3-210ENST00000484596 ZMYND10O75800 440 aa14.94□□□□□ -0.02
UBR3-210ENST00000484596 PUS10Q3MIT2 529 aaKnown RBP14.94□□□□□ -0.02
UBR3-210ENST00000484596 TLL1O43897 1013 aa14.93□□□□□ -0.02
UBR3-210ENST00000484596 MDM2Q00987 491 aaPredicted RBP14.93□□□□□ -0.02
UBR3-210ENST00000484596 BARGINQ6ZT62 677 aa14.93□□□□□ -0.02
UBR3-210ENST00000484596 KRI1Q8N9T8 703 aaKnown RBP14.93□□□□□ -0.02
UBR3-210ENST00000484596 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.93□□□□□ -0.02
UBR3-210ENST00000484596 GCGRP47871 477 aa14.92□□□□□ -0.02
UBR3-210ENST00000484596 NR1I2O75469 434 aa14.91□□□□□ -0.02
UBR3-210ENST00000484596 PRKCSHP14314 528 aaPredicted RBP14.91□□□□□ -0.02
UBR3-210ENST00000484596 FUT2Q10981 343 aa14.9□□□□□ -0.02
UBR3-210ENST00000484596 SCUBE3Q8IX30 993 aa14.9□□□□□ -0.02
UBR3-210ENST00000484596 GGCXP38435 758 aa14.87□□□□□ -0.03
UBR3-210ENST00000484596 CD46P15529 392 aa14.86□□□□□ -0.03
UBR3-210ENST00000484596 ATP6V1AP38606 617 aa14.86□□□□□ -0.03
UBR3-210ENST00000484596 MORN1Q5T089 497 aa14.86□□□□□ -0.03
UBR3-210ENST00000484596 TMUB1Q9BVT8 246 aa14.84□□□□□ -0.03
UBR3-210ENST00000484596 GPCPD1Q9NPB8 672 aa14.84□□□□□ -0.03
UBR3-210ENST00000484596 ADH1BP00325 375 aa14.83□□□□□ -0.04
UBR3-210ENST00000484596 CLCN1P35523 988 aa14.83□□□□□ -0.04
UBR3-210ENST00000484596 PRKD2Q9BZL6 878 aa14.83□□□□□ -0.04
UBR3-210ENST00000484596 S1PR4O95977 384 aa14.81□□□□□ -0.04
UBR3-210ENST00000484596 REPIN1Q9BWE0 567 aaKnown RBP14.81□□□□□ -0.04
UBR3-210ENST00000484596 RNF223E7ERA6 249 aa14.8□□□□□ -0.04
UBR3-210ENST00000484596 IRX2Q9BZI1 471 aaPredicted RBP14.8□□□□□ -0.04
UBR3-210ENST00000484596 FAM217BQ9NTX9 383 aaPredicted RBP14.8□□□□□ -0.04
UBR3-210ENST00000484596 SLC27A5Q9Y2P5 690 aa14.8□□□□□ -0.04
UBR3-210ENST00000484596 SPSB2Q99619 263 aa14.79□□□□□ -0.04
UBR3-210ENST00000484596 PPEF1O14829 653 aaPredicted RBP14.77□□□□□ -0.05
UBR3-210ENST00000484596 THAP11Q96EK4 314 aa14.77□□□□□ -0.05
UBR3-210ENST00000484596 KDM4AO75164 1064 aa14.76□□□□□ -0.05
UBR3-210ENST00000484596 GRIPAP1Q4V328 841 aa14.76□□□□□ -0.05
UBR3-210ENST00000484596 SLC6A16Q9GZN6 736 aa14.76□□□□□ -0.05
UBR3-210ENST00000484596 V9GY48 417 aaPredicted RBP14.76□□□□□ -0.05
UBR3-210ENST00000484596 FMNL1O95466 1100 aaPredicted RBP14.73□□□□□ -0.05
UBR3-210ENST00000484596 AMHR2Q16671 573 aa14.73□□□□□ -0.05
UBR3-210ENST00000484596 TTLL12Q14166 644 aaPredicted RBP14.72□□□□□ -0.05
UBR3-210ENST00000484596 ANKLE1Q8NAG6 615 aa14.72□□□□□ -0.05
UBR3-210ENST00000484596 SSTR3P32745 418 aaPredicted RBP14.71□□□□□ -0.05
UBR3-210ENST00000484596 BRICD5Q6PL45 260 aa14.71□□□□□ -0.05
UBR3-210ENST00000484596 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.05
UBR3-210ENST00000484596 FAM160A2Q8N612 972 aaPredicted RBP14.7□□□□□ -0.06
UBR3-210ENST00000484596 EMID1Q96A84 441 aaPredicted RBP14.7□□□□□ -0.06
UBR3-210ENST00000484596 TRIM66O15016 1216 aa14.69□□□□□ -0.06
UBR3-210ENST00000484596 USP46P62068 366 aa14.69□□□□□ -0.06
UBR3-210ENST00000484596 RNF19BQ6ZMZ0 732 aa14.69□□□□□ -0.06
UBR3-210ENST00000484596 HLA-CQ95604 372 aa14.69□□□□□ -0.06
UBR3-210ENST00000484596 AK7Q96M32 723 aa14.69□□□□□ -0.06
UBR3-210ENST00000484596 SLC19A1P41440 591 aa14.67□□□□□ -0.06
UBR3-210ENST00000484596 HOXA2O43364 376 aa14.66□□□□□ -0.06
UBR3-210ENST00000484596 GIGYF2Q6Y7W6 1299 aaKnown RBP14.66□□□□□ -0.06
UBR3-210ENST00000484596 Q3C1V9 767 aa14.65□□□□□ -0.06
UBR3-210ENST00000484596 NUTM1Q86Y26 1132 aa14.65□□□□□ -0.06
UBR3-210ENST00000484596 PLA2G2CQ5R387 149 aa14.64□□□□□ -0.07
UBR3-210ENST00000484596 GUCA2AQ02747 115 aa14.63□□□□□ -0.07
UBR3-210ENST00000484596 LIAT1Q6ZQX7 453 aa14.63□□□□□ -0.07
UBR3-210ENST00000484596 PARP9Q8IXQ6 854 aa14.63□□□□□ -0.07
UBR3-210ENST00000484596 SLC24A3Q9HC58 644 aa14.63□□□□□ -0.07
UBR3-210ENST00000484596 PRDM9Q9NQV7 894 aa14.63□□□□□ -0.07
UBR3-210ENST00000484596 GFRA3O60609 400 aa14.61□□□□□ -0.07
UBR3-210ENST00000484596 MSS51Q4VC12 460 aa14.61□□□□□ -0.07
UBR3-210ENST00000484596 SPRYD7Q5W111 196 aa14.6□□□□□ -0.07
UBR3-210ENST00000484596 SPIRE2Q8WWL2 714 aa14.59□□□□□ -0.07
UBR3-210ENST00000484596 USB1Q9BQ65 265 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms