RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 RGL3Q3MIN7 710 aa10.08□□□□□ -0.8
SHROOM3-206ENST00000484236 REM2Q8IYK8 340 aaPredicted RBP10.08□□□□□ -0.8
SHROOM3-206ENST00000484236 IQGAP1P46940 1657 aa10.08□□□□□ -0.8
SHROOM3-206ENST00000484236 CD109Q6YHK3 1445 aa10.07□□□□□ -0.8
SHROOM3-206ENST00000484236 POGZQ7Z3K3 1410 aa10.07□□□□□ -0.8
SHROOM3-206ENST00000484236 HECW2Q9P2P5 1572 aa10.07□□□□□ -0.8
SHROOM3-206ENST00000484236 ERICH6BQ5W0A0 696 aa10.07□□□□□ -0.8
SHROOM3-206ENST00000484236 MYOM2P54296 1465 aa10.06□□□□□ -0.8
SHROOM3-206ENST00000484236 FKBP8Q14318 412 aa10.06□□□□□ -0.8
SHROOM3-206ENST00000484236 CCDC184Q52MB2 194 aa10.06□□□□□ -0.8
SHROOM3-206ENST00000484236 IFT172Q9UG01 1749 aa10.05□□□□□ -0.8
SHROOM3-206ENST00000484236 BRD4O60885 1362 aaPredicted RBP10.05□□□□□ -0.8
SHROOM3-206ENST00000484236 KIF3BO15066 747 aa10.05□□□□□ -0.8
SHROOM3-206ENST00000484236 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
SHROOM3-206ENST00000484236 TMF1P82094 1093 aa10.05□□□□□ -0.8
SHROOM3-206ENST00000484236 NBPF1Q3BBV0 1214 aa10.05□□□□□ -0.8
SHROOM3-206ENST00000484236 PPRC1Q5VV67 1664 aaKnown RBP10.04□□□□□ -0.8
SHROOM3-206ENST00000484236 TESK2Q96S53 571 aa10.04□□□□□ -0.8
SHROOM3-206ENST00000484236 POLR3GLQ9BT43 218 aa10.04□□□□□ -0.8
SHROOM3-206ENST00000484236 MYBBP1AQ9BQG0 1328 aaKnown RBP10.04□□□□□ -0.8
SHROOM3-206ENST00000484236 SCAF11Q99590 1463 aaKnown RBP10.04□□□□□ -0.8
SHROOM3-206ENST00000484236 MAP3K4Q9Y6R4 1608 aa10.04□□□□□ -0.8
SHROOM3-206ENST00000484236 FAM9BQ8IZU0 186 aa10.03□□□□□ -0.8
SHROOM3-206ENST00000484236 MYT1LQ9UL68 1186 aa10.03□□□□□ -0.8
SHROOM3-206ENST00000484236 INSRP06213 1382 aa10.02□□□□□ -0.8
SHROOM3-206ENST00000484236 EIF3AQ14152 1382 aaKnown RBP10.02□□□□□ -0.8
SHROOM3-206ENST00000484236 PARD3Q8TEW0 1356 aa10.02□□□□□ -0.8
SHROOM3-206ENST00000484236 GLI2P10070 1586 aa10.02□□□□□ -0.81
SHROOM3-206ENST00000484236 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
SHROOM3-206ENST00000484236 ZMYM4Q5VZL5 1548 aa10.02□□□□□ -0.81
SHROOM3-206ENST00000484236 FRMPD1Q5SYB0 1578 aa10.01□□□□□ -0.81
SHROOM3-206ENST00000484236 FXR2P51116 673 aaKnown RBP eCLIP10.01□□□□□ -0.81
SHROOM3-206ENST00000484236 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
SHROOM3-206ENST00000484236 PNISRQ8TF01 805 aaKnown RBP10.01□□□□□ -0.81
SHROOM3-206ENST00000484236 SYNMO15061 1565 aa10.01□□□□□ -0.81
SHROOM3-206ENST00000484236 LRPPRCP42704 1394 aaKnown RBP10.01□□□□□ -0.81
SHROOM3-206ENST00000484236 ABCA6Q8N139 1617 aa10□□□□□ -0.81
SHROOM3-206ENST00000484236 ZC3H13Q5T200 1668 aaKnown RBP10□□□□□ -0.81
SHROOM3-206ENST00000484236 NRXN1Q9ULB1 1477 aa10□□□□□ -0.81
SHROOM3-206ENST00000484236 PER1O15534 1290 aaPredicted RBP10□□□□□ -0.81
SHROOM3-206ENST00000484236 ADGRB3O60242 1522 aa10□□□□□ -0.81
SHROOM3-206ENST00000484236 DISP3Q9P2K9 1392 aa10□□□□□ -0.81
SHROOM3-206ENST00000484236 SMG6Q86US8 1419 aaKnown RBP9.99□□□□□ -0.81
SHROOM3-206ENST00000484236 RICTORQ6R327 1708 aa9.99□□□□□ -0.81
SHROOM3-206ENST00000484236 NLRP13Q86W25 1043 aa9.99□□□□□ -0.81
SHROOM3-206ENST00000484236 SETBP1Q9Y6X0 1596 aa9.99□□□□□ -0.81
SHROOM3-206ENST00000484236 ABCC3O15438 1527 aa9.98□□□□□ -0.81
SHROOM3-206ENST00000484236 CAMSAP1Q5T5Y3 1602 aa9.98□□□□□ -0.81
SHROOM3-206ENST00000484236 MYO3AQ8NEV4 1616 aa9.98□□□□□ -0.81
SHROOM3-206ENST00000484236 PITPNM1O00562 1244 aa9.98□□□□□ -0.81
SHROOM3-206ENST00000484236 MROH2AA6NES4 1674 aa9.98□□□□□ -0.81
SHROOM3-206ENST00000484236 PPLO60437 1756 aa9.98□□□□□ -0.81
SHROOM3-206ENST00000484236 DIP2CQ9Y2E4 1556 aa9.97□□□□□ -0.81
SHROOM3-206ENST00000484236 KDM5AP29375 1690 aaKnown RBP9.97□□□□□ -0.81
SHROOM3-206ENST00000484236 RPGRIP1LQ68CZ1 1315 aa9.97□□□□□ -0.81
SHROOM3-206ENST00000484236 PLSCR2Q9NRY7 297 aa9.96□□□□□ -0.82
SHROOM3-206ENST00000484236 SBNO2Q9Y2G9 1366 aa9.96□□□□□ -0.82
SHROOM3-206ENST00000484236 NPATQ14207 1427 aa9.96□□□□□ -0.82
SHROOM3-206ENST00000484236 ARHGAP31Q2M1Z3 1444 aa9.96□□□□□ -0.82
SHROOM3-206ENST00000484236 PIK3C2BO00750 1634 aa9.96□□□□□ -0.82
SHROOM3-206ENST00000484236 LHX8Q68G74 356 aa9.95□□□□□ -0.82
SHROOM3-206ENST00000484236 PANK3Q9H999 370 aa9.95□□□□□ -0.82
SHROOM3-206ENST00000484236 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
SHROOM3-206ENST00000484236 NPC1L1Q9UHC9 1359 aa9.95□□□□□ -0.82
SHROOM3-206ENST00000484236 NOS1P29475 1434 aa9.95□□□□□ -0.82
SHROOM3-206ENST00000484236 UGGT1Q9NYU2 1555 aa9.95□□□□□ -0.82
SHROOM3-206ENST00000484236 MYOM1P52179 1685 aa9.93□□□□□ -0.82
SHROOM3-206ENST00000484236 PDE3BQ13370 1112 aa9.93□□□□□ -0.82
SHROOM3-206ENST00000484236 BCANQ96GW7 911 aa9.93□□□□□ -0.82
SHROOM3-206ENST00000484236 REREQ9P2R6 1566 aa9.92□□□□□ -0.82
SHROOM3-206ENST00000484236 ASXL1Q8IXJ9 1541 aa9.92□□□□□ -0.82
SHROOM3-206ENST00000484236 RNF123Q5XPI4 1314 aa9.92□□□□□ -0.82
SHROOM3-206ENST00000484236 PPP4R2Q9NY27 417 aa9.92□□□□□ -0.82
SHROOM3-206ENST00000484236 RIMBP3CA6NJZ7 1639 aa9.92□□□□□ -0.82
SHROOM3-206ENST00000484236 RIMBP3BA6NNM3 1639 aa9.92□□□□□ -0.82
SHROOM3-206ENST00000484236 RIMBP3Q9UFD9 1639 aa9.92□□□□□ -0.82
SHROOM3-206ENST00000484236 PIK3C2GO75747 1445 aa9.91□□□□□ -0.82
SHROOM3-206ENST00000484236 TSHZ2Q9NRE2 1034 aa9.91□□□□□ -0.82
SHROOM3-206ENST00000484236 KNSTRNQ9Y448 316 aa9.91□□□□□ -0.82
SHROOM3-206ENST00000484236 CFAP65Q6ZU64 1925 aaKnown RBP9.91□□□□□ -0.82
SHROOM3-206ENST00000484236 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.82
SHROOM3-206ENST00000484236 SIGLEC1Q9BZZ2 1709 aa9.9□□□□□ -0.82
SHROOM3-206ENST00000484236 ADGRF5Q8IZF2 1346 aa9.9□□□□□ -0.82
SHROOM3-206ENST00000484236 DIP2BQ9P265 1576 aa9.9□□□□□ -0.82
SHROOM3-206ENST00000484236 GGT6Q6P531 493 aa9.9□□□□□ -0.82
SHROOM3-206ENST00000484236 C14orf93Q9H972 538 aaKnown RBP9.9□□□□□ -0.82
SHROOM3-206ENST00000484236 ERVK-7P63135 1459 aa9.9□□□□□ -0.83
SHROOM3-206ENST00000484236 ZFYVE9O95405 1425 aa9.9□□□□□ -0.83
SHROOM3-206ENST00000484236 CFAP70Q5T0N1 1121 aa9.89□□□□□ -0.83
SHROOM3-206ENST00000484236 SLC52A1Q9NWF4 448 aa9.89□□□□□ -0.83
SHROOM3-206ENST00000484236 ADGRB1O14514 1584 aa9.88□□□□□ -0.83
SHROOM3-206ENST00000484236 AGLP35573 1532 aa9.88□□□□□ -0.83
SHROOM3-206ENST00000484236 NEXMIFQ5QGS0 1516 aa9.88□□□□□ -0.83
SHROOM3-206ENST00000484236 PREX1Q8TCU6 1659 aa9.88□□□□□ -0.83
SHROOM3-206ENST00000484236 RAPGEF3O95398 923 aa9.88□□□□□ -0.83
SHROOM3-206ENST00000484236 CNGB1Q14028 1251 aaPredicted RBP9.88□□□□□ -0.83
SHROOM3-206ENST00000484236 AMER1Q5JTC6 1135 aaPredicted RBP9.88□□□□□ -0.83
SHROOM3-206ENST00000484236 CC2D1BQ5T0F9 858 aaKnown RBP9.88□□□□□ -0.83
SHROOM3-206ENST00000484236 PUS7Q96PZ0 661 aaKnown RBP9.88□□□□□ -0.83
SHROOM3-206ENST00000484236 CENPJQ9HC77 1338 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms