RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
UFD1-208ENST00000484101 MYOM2P54296 1465 aa13.39□□□□□ -0.27
UFD1-208ENST00000484101 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
UFD1-208ENST00000484101 CARD11Q9BXL7 1154 aa13.38□□□□□ -0.27
UFD1-208ENST00000484101 C3P01024 1663 aa13.37□□□□□ -0.27
UFD1-208ENST00000484101 PIP4K2BP78356 416 aa13.37□□□□□ -0.27
UFD1-208ENST00000484101 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
UFD1-208ENST00000484101 ABCC3O15438 1527 aa13.37□□□□□ -0.27
UFD1-208ENST00000484101 RGS17Q9UGC6 210 aaPredicted RBP13.36□□□□□ -0.27
UFD1-208ENST00000484101 IQGAP1P46940 1657 aa13.36□□□□□ -0.27
UFD1-208ENST00000484101 KIF7Q2M1P5 1343 aa13.36□□□□□ -0.27
UFD1-208ENST00000484101 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
UFD1-208ENST00000484101 YTHDC1Q96MU7 727 aaKnown RBP13.35□□□□□ -0.27
UFD1-208ENST00000484101 ARHGAP31Q2M1Z3 1444 aa13.35□□□□□ -0.27
UFD1-208ENST00000484101 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
UFD1-208ENST00000484101 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
UFD1-208ENST00000484101 AGLP35573 1532 aa13.34□□□□□ -0.27
UFD1-208ENST00000484101 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
UFD1-208ENST00000484101 PIK3C2BO00750 1634 aa13.32□□□□□ -0.28
UFD1-208ENST00000484101 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
UFD1-208ENST00000484101 TOM1O60784 492 aa13.31□□□□□ -0.28
UFD1-208ENST00000484101 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
UFD1-208ENST00000484101 EIF3AQ14152 1382 aaKnown RBP13.31□□□□□ -0.28
UFD1-208ENST00000484101 MROH2AA6NES4 1674 aa13.31□□□□□ -0.28
UFD1-208ENST00000484101 NPATQ14207 1427 aa13.3□□□□□ -0.28
UFD1-208ENST00000484101 PPLO60437 1756 aa13.3□□□□□ -0.28
UFD1-208ENST00000484101 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
UFD1-208ENST00000484101 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
UFD1-208ENST00000484101 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
UFD1-208ENST00000484101 NOS1P29475 1434 aa13.29□□□□□ -0.28
UFD1-208ENST00000484101 RGL3Q3MIN7 710 aa13.28□□□□□ -0.28
UFD1-208ENST00000484101 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
UFD1-208ENST00000484101 RPGRIP1LQ68CZ1 1315 aa13.27□□□□□ -0.29
UFD1-208ENST00000484101 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
UFD1-208ENST00000484101 MYO3AQ8NEV4 1616 aa13.26□□□□□ -0.29
UFD1-208ENST00000484101 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
UFD1-208ENST00000484101 WASHC2CQ9Y4E1 1318 aa13.25□□□□□ -0.29
UFD1-208ENST00000484101 ST20-MTHFSA0A0A6YYL1 179 aa13.25□□□□□ -0.29
UFD1-208ENST00000484101 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
UFD1-208ENST00000484101 PRKRIP1Q9H875 184 aaPredicted RBP13.24□□□□□ -0.29
UFD1-208ENST00000484101 SYNMO15061 1565 aa13.24□□□□□ -0.29
UFD1-208ENST00000484101 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
UFD1-208ENST00000484101 POTEAQ6S8J7 498 aa13.22□□□□□ -0.29
UFD1-208ENST00000484101 KDM5AP29375 1690 aaKnown RBP13.21□□□□□ -0.29
UFD1-208ENST00000484101 TMF1P82094 1093 aa13.21□□□□□ -0.29
UFD1-208ENST00000484101 GGT6Q6P531 493 aa13.21□□□□□ -0.29
UFD1-208ENST00000484101 CPS1P31327 1500 aa13.21□□□□□ -0.29
UFD1-208ENST00000484101 SETD1AO15047 1707 aaKnown RBP13.2□□□□□ -0.3
UFD1-208ENST00000484101 SLC52A1Q9NWF4 448 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 PIK3C2GO75747 1445 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 ZFYVE9O95405 1425 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
UFD1-208ENST00000484101 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
UFD1-208ENST00000484101 ESF1Q9H501 851 aaKnown RBP13.19□□□□□ -0.3
UFD1-208ENST00000484101 NEXMIFQ5QGS0 1516 aa13.18□□□□□ -0.3
UFD1-208ENST00000484101 ZNF142P52746 1687 aaPredicted RBP13.18□□□□□ -0.3
UFD1-208ENST00000484101 CFAP65Q6ZU64 1925 aaKnown RBP13.18□□□□□ -0.3
UFD1-208ENST00000484101 RALBP1Q15311 655 aa13.18□□□□□ -0.3
UFD1-208ENST00000484101 TESK2Q96S53 571 aa13.18□□□□□ -0.3
UFD1-208ENST00000484101 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
UFD1-208ENST00000484101 ERVK-7P63135 1459 aa13.16□□□□□ -0.3
UFD1-208ENST00000484101 CLTCQ00610 1675 aaKnown RBP13.16□□□□□ -0.3
UFD1-208ENST00000484101 BRD4O60885 1362 aaPredicted RBP13.14□□□□□ -0.31
UFD1-208ENST00000484101 ADGRB1O14514 1584 aa13.14□□□□□ -0.31
UFD1-208ENST00000484101 CEP170BQ9Y4F5 1589 aaPredicted RBP13.14□□□□□ -0.31
UFD1-208ENST00000484101 MYOM1P52179 1685 aa13.14□□□□□ -0.31
UFD1-208ENST00000484101 QRICH2Q9H0J4 1663 aa13.13□□□□□ -0.31
UFD1-208ENST00000484101 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
UFD1-208ENST00000484101 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
UFD1-208ENST00000484101 MYBBP1AQ9BQG0 1328 aaKnown RBP13.13□□□□□ -0.31
UFD1-208ENST00000484101 INSRP06213 1382 aa13.12□□□□□ -0.31
UFD1-208ENST00000484101 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
UFD1-208ENST00000484101 MYO5BQ9ULV0 1848 aa13.12□□□□□ -0.31
UFD1-208ENST00000484101 POLR3GLQ9BT43 218 aa13.12□□□□□ -0.31
UFD1-208ENST00000484101 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
UFD1-208ENST00000484101 UPF1Q92900 1129 aaKnown RBP eCLIP13.11□□□□□ -0.31
UFD1-208ENST00000484101 ADGRF5Q8IZF2 1346 aa13.11□□□□□ -0.31
UFD1-208ENST00000484101 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
UFD1-208ENST00000484101 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
UFD1-208ENST00000484101 C14orf93Q9H972 538 aaKnown RBP13.1□□□□□ -0.31
UFD1-208ENST00000484101 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
UFD1-208ENST00000484101 PUS7Q96PZ0 661 aaKnown RBP13.08□□□□□ -0.32
UFD1-208ENST00000484101 ZBED9Q6R2W3 1325 aa13.08□□□□□ -0.32
UFD1-208ENST00000484101 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
UFD1-208ENST00000484101 ASXL1Q8IXJ9 1541 aa13.07□□□□□ -0.32
UFD1-208ENST00000484101 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
UFD1-208ENST00000484101 SRCAPQ6ZRS2 3230 aa13.06□□□□□ -0.32
UFD1-208ENST00000484101 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
UFD1-208ENST00000484101 CFAP70Q5T0N1 1121 aa13.06□□□□□ -0.32
UFD1-208ENST00000484101 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
UFD1-208ENST00000484101 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
UFD1-208ENST00000484101 IDI1Q13907 227 aa13.04□□□□□ -0.32
UFD1-208ENST00000484101 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
UFD1-208ENST00000484101 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
UFD1-208ENST00000484101 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
UFD1-208ENST00000484101 NEFLP07196 543 aa13.02□□□□□ -0.33
UFD1-208ENST00000484101 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
UFD1-208ENST00000484101 PANK3Q9H999 370 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms