RNA–Protein interactions for RNA: ENST00000483817.3

CBWD1-214, Transcript of COBW domain containing 1, humanhuman

TSL 3

Gene CBWD1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-214ENST00000483817 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
CBWD1-214ENST00000483817 NFX1Q12986 1120 aaKnown RBP11.06□□□□□ -0.64
CBWD1-214ENST00000483817 NBR1Q14596 966 aa11.06□□□□□ -0.64
CBWD1-214ENST00000483817 TNFRSF10AO00220 468 aa11.05□□□□□ -0.64
CBWD1-214ENST00000483817 LIAT1Q6ZQX7 453 aa11.05□□□□□ -0.64
CBWD1-214ENST00000483817 ANKLE1Q8NAG6 615 aa11.05□□□□□ -0.64
CBWD1-214ENST00000483817 CERKQ8TCT0 537 aa11.04□□□□□ -0.64
CBWD1-214ENST00000483817 PAXIP1Q6ZW49 1069 aaPredicted RBP11.03□□□□□ -0.64
CBWD1-214ENST00000483817 CRIPAKQ8N1N5 446 aa11.03□□□□□ -0.64
CBWD1-214ENST00000483817 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
CBWD1-214ENST00000483817 NUDT18Q6ZVK8 323 aa11□□□□□ -0.65
CBWD1-214ENST00000483817 SLF2Q8IX21 1173 aa11□□□□□ -0.65
CBWD1-214ENST00000483817 DACH1Q9UI36 760 aa10.99□□□□□ -0.65
CBWD1-214ENST00000483817 PPEF1O14829 653 aaPredicted RBP10.97□□□□□ -0.65
CBWD1-214ENST00000483817 SWT1Q5T5J6 900 aaKnown RBP10.97□□□□□ -0.65
CBWD1-214ENST00000483817 GMPR2Q9P2T1 348 aaKnown RBP10.97□□□□□ -0.65
CBWD1-214ENST00000483817 PCDHB3Q9Y5E6 796 aa10.97□□□□□ -0.65
CBWD1-214ENST00000483817 C11orf95C9JLR9 678 aaPredicted RBP10.96□□□□□ -0.65
CBWD1-214ENST00000483817 PRR14Q9BWN1 585 aa10.95□□□□□ -0.66
CBWD1-214ENST00000483817 LCE2CQ5TA81 110 aa10.94□□□□□ -0.66
CBWD1-214ENST00000483817 BLOC1S3Q6QNY0 202 aa10.94□□□□□ -0.66
CBWD1-214ENST00000483817 RBM27Q9P2N5 1060 aaKnown RBP10.94□□□□□ -0.66
CBWD1-214ENST00000483817 TLL1O43897 1013 aa10.93□□□□□ -0.66
CBWD1-214ENST00000483817 S1PR4O95977 384 aa10.93□□□□□ -0.66
CBWD1-214ENST00000483817 AVPP01185 164 aa10.93□□□□□ -0.66
CBWD1-214ENST00000483817 PDIA6Q15084 440 aa10.92□□□□□ -0.66
CBWD1-214ENST00000483817 LMOD2Q6P5Q4 547 aa10.92□□□□□ -0.66
CBWD1-214ENST00000483817 PKD2L1Q9P0L9 805 aa10.92□□□□□ -0.66
CBWD1-214ENST00000483817 PRIM1P49642 420 aaKnown RBP10.91□□□□□ -0.66
CBWD1-214ENST00000483817 AXIN1O15169 862 aa10.88□□□□□ -0.67
CBWD1-214ENST00000483817 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
CBWD1-214ENST00000483817 CTC1Q2NKJ3 1217 aa10.87□□□□□ -0.67
CBWD1-214ENST00000483817 PLA2G2CQ5R387 149 aa10.87□□□□□ -0.67
CBWD1-214ENST00000483817 TTC13Q8NBP0 860 aa10.87□□□□□ -0.67
CBWD1-214ENST00000483817 TERTO14746 1132 aaKnown RBP10.85□□□□□ -0.67
CBWD1-214ENST00000483817 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
CBWD1-214ENST00000483817 E2F4Q16254 413 aa10.85□□□□□ -0.67
CBWD1-214ENST00000483817 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
CBWD1-214ENST00000483817 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
CBWD1-214ENST00000483817 FOXC1Q12948 553 aa10.84□□□□□ -0.67
CBWD1-214ENST00000483817 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
CBWD1-214ENST00000483817 TOR4AQ9NXH8 423 aa10.84□□□□□ -0.67
CBWD1-214ENST00000483817 FAM181BA6NEQ2 426 aa10.83□□□□□ -0.68
CBWD1-214ENST00000483817 ADH1BP00325 375 aa10.81□□□□□ -0.68
CBWD1-214ENST00000483817 SUZ12Q15022 739 aaKnown RBP10.8□□□□□ -0.68
CBWD1-214ENST00000483817 EYA1Q99502 592 aa10.79□□□□□ -0.68
CBWD1-214ENST00000483817 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
CBWD1-214ENST00000483817 PADI6Q6TGC4 694 aa10.77□□□□□ -0.69
CBWD1-214ENST00000483817 SLC6A16Q9GZN6 736 aa10.77□□□□□ -0.69
CBWD1-214ENST00000483817 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
CBWD1-214ENST00000483817 SNRPBP14678 240 aaKnown RBP10.76□□□□□ -0.69
CBWD1-214ENST00000483817 ARIH1Q9Y4X5 557 aaPredicted RBP10.76□□□□□ -0.69
CBWD1-214ENST00000483817 GRXCR2A6NFK2 248 aa10.75□□□□□ -0.69
CBWD1-214ENST00000483817 CYP4X1Q8N118 509 aa10.75□□□□□ -0.69
CBWD1-214ENST00000483817 OSBPP22059 807 aa10.74□□□□□ -0.69
CBWD1-214ENST00000483817 LORP23490 312 aaPredicted RBP10.73□□□□□ -0.69
CBWD1-214ENST00000483817 RPIAP49247 311 aa10.73□□□□□ -0.69
CBWD1-214ENST00000483817 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
CBWD1-214ENST00000483817 KMT5BQ4FZB7 885 aa10.72□□□□□ -0.69
CBWD1-214ENST00000483817 TRIM47Q96LD4 638 aa10.72□□□□□ -0.69
CBWD1-214ENST00000483817 ATP13A2Q9NQ11 1180 aa10.72□□□□□ -0.69
CBWD1-214ENST00000483817 NR1I2O75469 434 aa10.7□□□□□ -0.7
CBWD1-214ENST00000483817 ZSCAN1Q8NBB4 408 aa10.69□□□□□ -0.7
CBWD1-214ENST00000483817 SENP2Q9HC62 589 aa10.68□□□□□ -0.7
CBWD1-214ENST00000483817 CD2BP2O95400 341 aaKnown RBP10.67□□□□□ -0.7
CBWD1-214ENST00000483817 CFHP08603 1231 aa10.65□□□□□ -0.7
CBWD1-214ENST00000483817 DNAJB2P25686 324 aa10.65□□□□□ -0.7
CBWD1-214ENST00000483817 KCNV2Q8TDN2 545 aa10.64□□□□□ -0.71
CBWD1-214ENST00000483817 GMPRP36959 345 aa10.63□□□□□ -0.71
CBWD1-214ENST00000483817 SCUBE3Q8IX30 993 aa10.63□□□□□ -0.71
CBWD1-214ENST00000483817 SLC16A10Q8TF71 515 aa10.63□□□□□ -0.71
CBWD1-214ENST00000483817 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
CBWD1-214ENST00000483817 TTC24A2A3L6 582 aaPredicted RBP10.62□□□□□ -0.71
CBWD1-214ENST00000483817 SMPD1P17405 629 aa10.61□□□□□ -0.71
CBWD1-214ENST00000483817 KIFC2Q96AC6 838 aa10.61□□□□□ -0.71
CBWD1-214ENST00000483817 SPSB2Q99619 263 aa10.61□□□□□ -0.71
CBWD1-214ENST00000483817 ARHGEF1Q92888 912 aaKnown RBP10.6□□□□□ -0.71
CBWD1-214ENST00000483817 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
CBWD1-214ENST00000483817 SLC10A3P09131 477 aa10.57□□□□□ -0.72
CBWD1-214ENST00000483817 NXF1Q9UBU9 619 aaKnown RBP10.57□□□□□ -0.72
CBWD1-214ENST00000483817 FCF1Q9Y324 198 aaKnown RBP10.57□□□□□ -0.72
CBWD1-214ENST00000483817 MLLT3P42568 568 aaPredicted RBP10.56□□□□□ -0.72
CBWD1-214ENST00000483817 SNIP1Q8TAD8 396 aaKnown RBP10.56□□□□□ -0.72
CBWD1-214ENST00000483817 IRF7Q92985 503 aa10.55□□□□□ -0.72
CBWD1-214ENST00000483817 P3H3Q8IVL6 736 aa10.54□□□□□ -0.72
CBWD1-214ENST00000483817 NPAS3Q8IXF0 933 aa10.54□□□□□ -0.72
CBWD1-214ENST00000483817 RBM46Q8TBY0 533 aaKnown RBP10.54□□□□□ -0.72
CBWD1-214ENST00000483817 WNT7AO00755 349 aa10.53□□□□□ -0.72
CBWD1-214ENST00000483817 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
CBWD1-214ENST00000483817 PUS10Q3MIT2 529 aaKnown RBP10.51□□□□□ -0.73
CBWD1-214ENST00000483817 J3QL48 77 aa10.49□□□□□ -0.73
CBWD1-214ENST00000483817 ADGRG1Q9Y653 693 aa10.49□□□□□ -0.73
CBWD1-214ENST00000483817 HPS1Q92902 700 aa10.48□□□□□ -0.73
CBWD1-214ENST00000483817 H3BM21 787 aa10.47□□□□□ -0.73
CBWD1-214ENST00000483817 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
CBWD1-214ENST00000483817 THAP11Q96EK4 314 aa10.47□□□□□ -0.73
CBWD1-214ENST00000483817 ZBTB24O43167 697 aaPredicted RBP10.45□□□□□ -0.74
CBWD1-214ENST00000483817 KCNMA1Q12791 1236 aa10.45□□□□□ -0.74
CBWD1-214ENST00000483817 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
CBWD1-214ENST00000483817 MRGPRX2Q96LB1 330 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms