RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 KANK1Q14678 1352 aa16.6■□□□□ 0.25
LINC00477-201ENST00000483544 PDE3BQ13370 1112 aa16.59■□□□□ 0.25
LINC00477-201ENST00000483544 ATP7AQ04656 1500 aa16.59■□□□□ 0.25
LINC00477-201ENST00000483544 FGD1P98174 961 aa16.58■□□□□ 0.24
LINC00477-201ENST00000483544 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
LINC00477-201ENST00000483544 TESK2Q96S53 571 aa16.58■□□□□ 0.24
LINC00477-201ENST00000483544 NOP58Q9Y2X3 529 aaKnown RBP16.58■□□□□ 0.24
LINC00477-201ENST00000483544 RGL3Q3MIN7 710 aa16.57■□□□□ 0.24
LINC00477-201ENST00000483544 CDCA8Q53HL2 280 aa16.57■□□□□ 0.24
LINC00477-201ENST00000483544 PER1O15534 1290 aaPredicted RBP16.56■□□□□ 0.24
LINC00477-201ENST00000483544 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
LINC00477-201ENST00000483544 NBPF1Q3BBV0 1214 aa16.56■□□□□ 0.24
LINC00477-201ENST00000483544 FANCAO15360 1455 aa16.55■□□□□ 0.24
LINC00477-201ENST00000483544 CFAP74Q9C0B2 1584 aa16.54■□□□□ 0.24
LINC00477-201ENST00000483544 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
LINC00477-201ENST00000483544 CLTCL1P53675 1640 aa16.54■□□□□ 0.24
LINC00477-201ENST00000483544 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
LINC00477-201ENST00000483544 SYNMO15061 1565 aa16.53■□□□□ 0.24
LINC00477-201ENST00000483544 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
LINC00477-201ENST00000483544 KIF1BO60333 1816 aa16.52■□□□□ 0.23
LINC00477-201ENST00000483544 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.23
LINC00477-201ENST00000483544 DISP3Q9P2K9 1392 aa16.52■□□□□ 0.23
LINC00477-201ENST00000483544 MYOM2P54296 1465 aa16.51■□□□□ 0.23
LINC00477-201ENST00000483544 LMTK2Q8IWU2 1503 aa16.51■□□□□ 0.23
LINC00477-201ENST00000483544 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
LINC00477-201ENST00000483544 BLMP54132 1417 aaPredicted RBP16.49■□□□□ 0.23
LINC00477-201ENST00000483544 NPC1L1Q9UHC9 1359 aa16.49■□□□□ 0.23
LINC00477-201ENST00000483544 AAMPQ13685 434 aa16.49■□□□□ 0.23
LINC00477-201ENST00000483544 ARXQ96QS3 562 aa16.49■□□□□ 0.23
LINC00477-201ENST00000483544 MROH1Q8NDA8 1641 aa16.48■□□□□ 0.23
LINC00477-201ENST00000483544 RTN4Q9NQC3 1192 aaKnown RBP16.48■□□□□ 0.23
LINC00477-201ENST00000483544 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
LINC00477-201ENST00000483544 IFT172Q9UG01 1749 aa16.47■□□□□ 0.23
LINC00477-201ENST00000483544 AFAP1Q8N556 730 aa16.47■□□□□ 0.23
LINC00477-201ENST00000483544 MAP3K4Q9Y6R4 1608 aa16.46■□□□□ 0.23
LINC00477-201ENST00000483544 EFCAB6Q5THR3 1501 aa16.46■□□□□ 0.23
LINC00477-201ENST00000483544 PANK3Q9H999 370 aa16.46■□□□□ 0.23
LINC00477-201ENST00000483544 ZNF518AQ6AHZ1 1483 aa16.46■□□□□ 0.23
LINC00477-201ENST00000483544 KDM5AP29375 1690 aaKnown RBP16.46■□□□□ 0.23
LINC00477-201ENST00000483544 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
LINC00477-201ENST00000483544 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
LINC00477-201ENST00000483544 ASXL2Q76L83 1435 aa16.45■□□□□ 0.22
LINC00477-201ENST00000483544 B4GALNT3Q6L9W6 998 aa16.44■□□□□ 0.22
LINC00477-201ENST00000483544 MYO3AQ8NEV4 1616 aa16.43■□□□□ 0.22
LINC00477-201ENST00000483544 ASXL1Q8IXJ9 1541 aa16.42■□□□□ 0.22
LINC00477-201ENST00000483544 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
LINC00477-201ENST00000483544 MYOM1P52179 1685 aa16.41■□□□□ 0.22
LINC00477-201ENST00000483544 KNSTRNQ9Y448 316 aa16.41■□□□□ 0.22
LINC00477-201ENST00000483544 PIK3C2GO75747 1445 aa16.41■□□□□ 0.22
LINC00477-201ENST00000483544 NRXN1Q9ULB1 1477 aa16.41■□□□□ 0.22
LINC00477-201ENST00000483544 SETBP1Q9Y6X0 1596 aa16.41■□□□□ 0.22
LINC00477-201ENST00000483544 KDM4FA0A1W2PPD8 638 aa16.4■□□□□ 0.22
LINC00477-201ENST00000483544 RRP1P56182 461 aaKnown RBP16.4■□□□□ 0.22
LINC00477-201ENST00000483544 RCAN3Q9UKA8 241 aa16.4■□□□□ 0.22
LINC00477-201ENST00000483544 ABCA6Q8N139 1617 aa16.39■□□□□ 0.22
LINC00477-201ENST00000483544 SBNO2Q9Y2G9 1366 aa16.39■□□□□ 0.21
LINC00477-201ENST00000483544 KIF3BO15066 747 aa16.39■□□□□ 0.21
LINC00477-201ENST00000483544 PPRC1Q5VV67 1664 aaKnown RBP16.39■□□□□ 0.21
LINC00477-201ENST00000483544 MLH3Q9UHC1 1453 aa16.39■□□□□ 0.21
LINC00477-201ENST00000483544 NBR1Q14596 966 aa16.39■□□□□ 0.21
LINC00477-201ENST00000483544 RBM10P98175 930 aaKnown RBP16.38■□□□□ 0.21
LINC00477-201ENST00000483544 TAF7LQ5H9L4 462 aa16.36■□□□□ 0.21
LINC00477-201ENST00000483544 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
LINC00477-201ENST00000483544 ADGRB3O60242 1522 aa16.36■□□□□ 0.21
LINC00477-201ENST00000483544 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC00477-201ENST00000483544 FAM43AQ8N2R8 423 aa16.36■□□□□ 0.21
LINC00477-201ENST00000483544 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
LINC00477-201ENST00000483544 HECW2Q9P2P5 1572 aa16.35■□□□□ 0.21
LINC00477-201ENST00000483544 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
LINC00477-201ENST00000483544 RRP9O43818 475 aaKnown RBP16.34■□□□□ 0.21
LINC00477-201ENST00000483544 POGZQ7Z3K3 1410 aa16.34■□□□□ 0.21
LINC00477-201ENST00000483544 PPLO60437 1756 aa16.34■□□□□ 0.21
LINC00477-201ENST00000483544 MROH2AA6NES4 1674 aa16.33■□□□□ 0.21
LINC00477-201ENST00000483544 RPGRIP1LQ68CZ1 1315 aa16.33■□□□□ 0.2
LINC00477-201ENST00000483544 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
LINC00477-201ENST00000483544 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
LINC00477-201ENST00000483544 NEO1Q92859 1461 aa16.31■□□□□ 0.2
LINC00477-201ENST00000483544 CD109Q6YHK3 1445 aa16.31■□□□□ 0.2
LINC00477-201ENST00000483544 ERVK-7P63135 1459 aa16.3■□□□□ 0.2
LINC00477-201ENST00000483544 ZC3H13Q5T200 1668 aaKnown RBP16.29■□□□□ 0.2
LINC00477-201ENST00000483544 TCERG1O14776 1098 aaKnown RBP16.28■□□□□ 0.2
LINC00477-201ENST00000483544 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
LINC00477-201ENST00000483544 FRMPD1Q5SYB0 1578 aa16.27■□□□□ 0.2
LINC00477-201ENST00000483544 FBXO41Q8TF61 875 aa16.27■□□□□ 0.19
LINC00477-201ENST00000483544 USP32Q8NFA0 1604 aa16.27■□□□□ 0.19
LINC00477-201ENST00000483544 UGGT1Q9NYU2 1555 aa16.26■□□□□ 0.19
LINC00477-201ENST00000483544 MS4A1P11836 297 aa16.26■□□□□ 0.19
LINC00477-201ENST00000483544 CAMSAP1Q5T5Y3 1602 aa16.26■□□□□ 0.19
LINC00477-201ENST00000483544 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
LINC00477-201ENST00000483544 IPO9Q96P70 1041 aaKnown RBP16.25■□□□□ 0.19
LINC00477-201ENST00000483544 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
LINC00477-201ENST00000483544 ABCC3O15438 1527 aa16.25■□□□□ 0.19
LINC00477-201ENST00000483544 ADGRF5Q8IZF2 1346 aa16.24■□□□□ 0.19
LINC00477-201ENST00000483544 ZNF521Q96K83 1311 aa16.24■□□□□ 0.19
LINC00477-201ENST00000483544 PIK3C2BO00750 1634 aa16.24■□□□□ 0.19
LINC00477-201ENST00000483544 NPATQ14207 1427 aa16.24■□□□□ 0.19
LINC00477-201ENST00000483544 CFAP70Q5T0N1 1121 aa16.24■□□□□ 0.19
LINC00477-201ENST00000483544 QRICH2Q9H0J4 1663 aa16.24■□□□□ 0.19
LINC00477-201ENST00000483544 ARHGAP31Q2M1Z3 1444 aa16.24■□□□□ 0.19
LINC00477-201ENST00000483544 A0A0U1RQG5 324 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms