RNA–Protein interactions for RNA: ENST00000483536.6

NOVA1-205, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 1 (best)

Gene NOVA1, Length 6,575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-205ENST00000483536 GBP4Q96PP9 640 aa9.5□□□□□ -0.89
NOVA1-205ENST00000483536 FAM43AQ8N2R8 423 aa9.5□□□□□ -0.89
NOVA1-205ENST00000483536 SENP3Q9H4L4 574 aaPredicted RBP9.5□□□□□ -0.89
NOVA1-205ENST00000483536 MKL2Q9ULH7 1088 aa9.5□□□□□ -0.89
NOVA1-205ENST00000483536 PDCL3Q9H2J4 239 aa9.5□□□□□ -0.89
NOVA1-205ENST00000483536 CASQ1P31415 396 aa9.5□□□□□ -0.89
NOVA1-205ENST00000483536 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.5□□□□□ -0.89
NOVA1-205ENST00000483536 CCDC82Q8N4S0 544 aa9.49□□□□□ -0.89
NOVA1-205ENST00000483536 TSR1Q2NL82 804 aaKnown RBP9.49□□□□□ -0.89
NOVA1-205ENST00000483536 KIAA0754O94854 1291 aa9.49□□□□□ -0.89
NOVA1-205ENST00000483536 RUFY1Q96T51 708 aa9.49□□□□□ -0.89
NOVA1-205ENST00000483536 MYCBPQ99417 103 aaPredicted RBP9.49□□□□□ -0.89
NOVA1-205ENST00000483536 HSPA5P11021 654 aaKnown RBP9.48□□□□□ -0.89
NOVA1-205ENST00000483536 ZBTB17Q13105 803 aa9.48□□□□□ -0.89
NOVA1-205ENST00000483536 RNF168Q8IYW5 571 aaPredicted RBP9.48□□□□□ -0.89
NOVA1-205ENST00000483536 DHX16O60231 1041 aaKnown RBP9.47□□□□□ -0.89
NOVA1-205ENST00000483536 KIF5CO60282 957 aa9.47□□□□□ -0.89
NOVA1-205ENST00000483536 DDX12PQ92771 950 aa9.47□□□□□ -0.89
NOVA1-205ENST00000483536 ZMAT2Q96NC0 199 aaKnown RBP9.47□□□□□ -0.89
NOVA1-205ENST00000483536 INCENPQ9NQS7 918 aa9.47□□□□□ -0.89
NOVA1-205ENST00000483536 SYCP1Q15431 976 aa9.47□□□□□ -0.89
NOVA1-205ENST00000483536 ZFYVE27Q5T4F4 411 aa9.47□□□□□ -0.89
NOVA1-205ENST00000483536 KIF3AQ9Y496 699 aa9.47□□□□□ -0.89
NOVA1-205ENST00000483536 PABPN1Q86U42 306 aaKnown RBP eCLIP9.46□□□□□ -0.89
NOVA1-205ENST00000483536 CALCOCO1Q9P1Z2 691 aa9.46□□□□□ -0.89
NOVA1-205ENST00000483536 DRC1Q96MC2 740 aa9.46□□□□□ -0.89
NOVA1-205ENST00000483536 INF2Q27J81 1249 aa9.46□□□□□ -0.9
NOVA1-205ENST00000483536 LRCH2Q5VUJ6 765 aa9.46□□□□□ -0.9
NOVA1-205ENST00000483536 BIN2Q9UBW5 565 aaPredicted RBP9.45□□□□□ -0.9
NOVA1-205ENST00000483536 ATICP31939 592 aa9.45□□□□□ -0.9
NOVA1-205ENST00000483536 CDR1P51861 262 aa9.45□□□□□ -0.9
NOVA1-205ENST00000483536 MIPOL1Q8TD10 442 aa9.45□□□□□ -0.9
NOVA1-205ENST00000483536 IKBKGQ9Y6K9 419 aa9.45□□□□□ -0.9
NOVA1-205ENST00000483536 WDR75Q8IWA0 830 aaKnown RBP9.45□□□□□ -0.9
NOVA1-205ENST00000483536 MPP4Q96JB8 637 aa9.45□□□□□ -0.9
NOVA1-205ENST00000483536 MAFGO15525 162 aa9.44□□□□□ -0.9
NOVA1-205ENST00000483536 NUCKS1Q9H1E3 243 aaKnown RBP9.44□□□□□ -0.9
NOVA1-205ENST00000483536 ZNF513Q8N8E2 541 aaPredicted RBP9.44□□□□□ -0.9
NOVA1-205ENST00000483536 RBM19Q9Y4C8 960 aaKnown RBP9.44□□□□□ -0.9
NOVA1-205ENST00000483536 SF3A1Q15459 793 aaKnown RBP9.44□□□□□ -0.9
NOVA1-205ENST00000483536 TSPY2A6NKD2 308 aa9.43□□□□□ -0.9
NOVA1-205ENST00000483536 TSPY3P0CV98 308 aa9.43□□□□□ -0.9
NOVA1-205ENST00000483536 TSPY8P0CW00 308 aa9.43□□□□□ -0.9
NOVA1-205ENST00000483536 TSPY1Q01534 308 aa9.43□□□□□ -0.9
NOVA1-205ENST00000483536 LIMCH1Q9UPQ0 1083 aa9.43□□□□□ -0.9
NOVA1-205ENST00000483536 ERCC3P19447 782 aa9.43□□□□□ -0.9
NOVA1-205ENST00000483536 RFX1P22670 979 aa9.43□□□□□ -0.9
NOVA1-205ENST00000483536 ATP6V1E1P36543 226 aa9.42□□□□□ -0.9
NOVA1-205ENST00000483536 CCDC191Q8NCU4 936 aa9.42□□□□□ -0.9
NOVA1-205ENST00000483536 NF2P35240 595 aa9.42□□□□□ -0.9
NOVA1-205ENST00000483536 ANAPC4Q9UJX5 808 aa9.42□□□□□ -0.9
NOVA1-205ENST00000483536 VASPP50552 380 aaPredicted RBP9.42□□□□□ -0.9
NOVA1-205ENST00000483536 BLVRAP53004 296 aa9.41□□□□□ -0.9
NOVA1-205ENST00000483536 SMYD5Q6GMV2 418 aa9.41□□□□□ -0.9
NOVA1-205ENST00000483536 DBN1Q16643 649 aa9.41□□□□□ -0.9
NOVA1-205ENST00000483536 LETM1O95202 739 aaPredicted RBP9.41□□□□□ -0.9
NOVA1-205ENST00000483536 NBPF7P0C2Y1 421 aaPredicted RBP9.41□□□□□ -0.9
NOVA1-205ENST00000483536 RINLQ6ZS11 566 aa9.41□□□□□ -0.9
NOVA1-205ENST00000483536 DYTNA2CJ06 578 aa9.41□□□□□ -0.9
NOVA1-205ENST00000483536 SESN3P58005 492 aa9.41□□□□□ -0.9
NOVA1-205ENST00000483536 KCNA1Q09470 495 aa9.4□□□□□ -0.9
NOVA1-205ENST00000483536 CC2D1AQ6P1N0 951 aaPredicted RBP9.4□□□□□ -0.9
NOVA1-205ENST00000483536 PRPHP41219 470 aa9.4□□□□□ -0.9
NOVA1-205ENST00000483536 TMA7Q9Y2S6 64 aaKnown RBP9.4□□□□□ -0.9
NOVA1-205ENST00000483536 CT47A1Q5JQC4 288 aaPredicted RBP9.4□□□□□ -0.9
NOVA1-205ENST00000483536 CCDC91Q7Z6B0 441 aa9.4□□□□□ -0.9
NOVA1-205ENST00000483536 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.91
NOVA1-205ENST00000483536 APBB1IPQ7Z5R6 666 aaPredicted RBP9.4□□□□□ -0.91
NOVA1-205ENST00000483536 NBPF1Q3BBV0 1214 aa9.39□□□□□ -0.91
NOVA1-205ENST00000483536 SYAP1Q96A49 352 aaPredicted RBP9.39□□□□□ -0.91
NOVA1-205ENST00000483536 TERF1P54274 439 aa9.39□□□□□ -0.91
NOVA1-205ENST00000483536 FEZ1Q99689 392 aa9.39□□□□□ -0.91
NOVA1-205ENST00000483536 RGS3P49796 1198 aa9.39□□□□□ -0.91
NOVA1-205ENST00000483536 ATRIPQ8WXE1 791 aa9.39□□□□□ -0.91
NOVA1-205ENST00000483536 RMDN2Q96LZ7 410 aa9.39□□□□□ -0.91
NOVA1-205ENST00000483536 PNMA2Q9UL42 364 aa9.39□□□□□ -0.91
NOVA1-205ENST00000483536 PPP1R12AO14974 1030 aaPredicted RBP9.38□□□□□ -0.91
NOVA1-205ENST00000483536 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 AP1ARQ63HQ0 302 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 WDR66Q8TBY9 1149 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 USP6NLQ92738 828 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 RRP12Q5JTH9 1297 aaKnown RBP9.38□□□□□ -0.91
NOVA1-205ENST00000483536 ACRBPQ8NEB7 543 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 SLKQ9H2G2 1235 aaPredicted RBP9.38□□□□□ -0.91
NOVA1-205ENST00000483536 SLC24A3Q9HC58 644 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 BIRC2Q13490 618 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 DCTN1Q14203 1278 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 SLC4A8Q2Y0W8 1093 aa9.38□□□□□ -0.91
NOVA1-205ENST00000483536 CCDC152Q4G0S7 254 aa9.37□□□□□ -0.91
NOVA1-205ENST00000483536 KIAA1328Q86T90 577 aa9.37□□□□□ -0.91
NOVA1-205ENST00000483536 USP5P45974 858 aa9.37□□□□□ -0.91
NOVA1-205ENST00000483536 SPOCK3Q9BQ16 436 aa9.37□□□□□ -0.91
NOVA1-205ENST00000483536 PRDM16Q9HAZ2 1276 aa9.37□□□□□ -0.91
NOVA1-205ENST00000483536 SEPT6Q14141 434 aa9.37□□□□□ -0.91
NOVA1-205ENST00000483536 ZHX1Q9UKY1 873 aaPredicted RBP9.37□□□□□ -0.91
NOVA1-205ENST00000483536 IPO7O95373 1038 aaKnown RBP9.36□□□□□ -0.91
NOVA1-205ENST00000483536 LONRF3Q496Y0 759 aa9.36□□□□□ -0.91
NOVA1-205ENST00000483536 RNF187Q5TA31 235 aaPredicted RBP9.36□□□□□ -0.91
NOVA1-205ENST00000483536 NBPF11Q86T75 865 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms