RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 FCHSD2O94868 740 aa7.91□□□□□ -1.14
LRCH3-217ENST00000483442 BLOC1S3Q6QNY0 202 aa7.91□□□□□ -1.14
LRCH3-217ENST00000483442 RBM46Q8TBY0 533 aaKnown RBP7.91□□□□□ -1.14
LRCH3-217ENST00000483442 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.91□□□□□ -1.14
LRCH3-217ENST00000483442 ZPR1O75312 459 aa7.9□□□□□ -1.14
LRCH3-217ENST00000483442 SLC10A3P09131 477 aa7.9□□□□□ -1.14
LRCH3-217ENST00000483442 KDM2AQ9Y2K7 1162 aa7.9□□□□□ -1.14
LRCH3-217ENST00000483442 GPR37O15354 613 aa7.89□□□□□ -1.15
LRCH3-217ENST00000483442 PXYLP1Q8TE99 480 aa7.89□□□□□ -1.15
LRCH3-217ENST00000483442 PCDHB3Q9Y5E6 796 aa7.89□□□□□ -1.15
LRCH3-217ENST00000483442 TLL1O43897 1013 aa7.88□□□□□ -1.15
LRCH3-217ENST00000483442 Q6ZNB5 142 aa7.88□□□□□ -1.15
LRCH3-217ENST00000483442 EMID1Q96A84 441 aaPredicted RBP7.88□□□□□ -1.15
LRCH3-217ENST00000483442 GFRA3O60609 400 aa7.86□□□□□ -1.15
LRCH3-217ENST00000483442 CFHP08603 1231 aa7.86□□□□□ -1.15
LRCH3-217ENST00000483442 NLRP7Q8WX94 980 aa7.86□□□□□ -1.15
LRCH3-217ENST00000483442 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
LRCH3-217ENST00000483442 ACTN4O43707 911 aaKnown RBP7.85□□□□□ -1.15
LRCH3-217ENST00000483442 HAP1P54257 671 aaPredicted RBP7.85□□□□□ -1.15
LRCH3-217ENST00000483442 METTL3Q86U44 580 aaKnown RBP7.85□□□□□ -1.15
LRCH3-217ENST00000483442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
LRCH3-217ENST00000483442 HIC1Q14526 733 aa7.84□□□□□ -1.15
LRCH3-217ENST00000483442 V9GY48 417 aaPredicted RBP7.84□□□□□ -1.15
LRCH3-217ENST00000483442 RB1CC1Q8TDY2 1594 aa7.84□□□□□ -1.15
LRCH3-217ENST00000483442 RNF223E7ERA6 249 aa7.83□□□□□ -1.16
LRCH3-217ENST00000483442 PPEF1O14829 653 aaPredicted RBP7.83□□□□□ -1.16
LRCH3-217ENST00000483442 SLC4A3P48751 1232 aa7.83□□□□□ -1.16
LRCH3-217ENST00000483442 PHOX2BQ99453 314 aa7.83□□□□□ -1.16
LRCH3-217ENST00000483442 GNPATO15228 680 aa7.82□□□□□ -1.16
LRCH3-217ENST00000483442 OATP04181 439 aa7.82□□□□□ -1.16
LRCH3-217ENST00000483442 PRR14Q9BWN1 585 aa7.82□□□□□ -1.16
LRCH3-217ENST00000483442 PUS10Q3MIT2 529 aaKnown RBP7.81□□□□□ -1.16
LRCH3-217ENST00000483442 S1PR4O95977 384 aa7.8□□□□□ -1.16
LRCH3-217ENST00000483442 KMT5BQ4FZB7 885 aa7.8□□□□□ -1.16
LRCH3-217ENST00000483442 TRIM67Q6ZTA4 783 aa7.8□□□□□ -1.16
LRCH3-217ENST00000483442 TMUB1Q9BVT8 246 aa7.8□□□□□ -1.16
LRCH3-217ENST00000483442 NRG2O14511 850 aaPredicted RBP7.78□□□□□ -1.16
LRCH3-217ENST00000483442 GGCXP38435 758 aa7.78□□□□□ -1.16
LRCH3-217ENST00000483442 LAPTM4AQ15012 233 aa7.78□□□□□ -1.16
LRCH3-217ENST00000483442 SMYD5Q6GMV2 418 aa7.78□□□□□ -1.16
LRCH3-217ENST00000483442 TRAF7Q6Q0C0 670 aa7.78□□□□□ -1.16
LRCH3-217ENST00000483442 SCUBE3Q8IX30 993 aa7.78□□□□□ -1.16
LRCH3-217ENST00000483442 PLA2G2CQ5R387 149 aa7.77□□□□□ -1.17
LRCH3-217ENST00000483442 LIAT1Q6ZQX7 453 aa7.77□□□□□ -1.17
LRCH3-217ENST00000483442 PDZRN3Q9UPQ7 1066 aa7.77□□□□□ -1.17
LRCH3-217ENST00000483442 SLC19A1P41440 591 aa7.76□□□□□ -1.17
LRCH3-217ENST00000483442 DAXXQ9UER7 740 aaPredicted RBP7.76□□□□□ -1.17
LRCH3-217ENST00000483442 DDX11L8A8MPP1 907 aa7.75□□□□□ -1.17
LRCH3-217ENST00000483442 ADH1BP00325 375 aa7.75□□□□□ -1.17
LRCH3-217ENST00000483442 ANKLE1Q8NAG6 615 aa7.75□□□□□ -1.17
LRCH3-217ENST00000483442 NR1I2O75469 434 aa7.74□□□□□ -1.17
LRCH3-217ENST00000483442 SPRYD7Q5W111 196 aa7.74□□□□□ -1.17
LRCH3-217ENST00000483442 GPIHBP1Q8IV16 184 aa7.74□□□□□ -1.17
LRCH3-217ENST00000483442 RDH13Q8NBN7 331 aa7.74□□□□□ -1.17
LRCH3-217ENST00000483442 FUT2Q10981 343 aa7.73□□□□□ -1.17
LRCH3-217ENST00000483442 MORN1Q5T089 497 aa7.72□□□□□ -1.17
LRCH3-217ENST00000483442 SLC6A16Q9GZN6 736 aa7.72□□□□□ -1.17
LRCH3-217ENST00000483442 GCGRP47871 477 aa7.71□□□□□ -1.18
LRCH3-217ENST00000483442 THAP11Q96EK4 314 aa7.71□□□□□ -1.18
LRCH3-217ENST00000483442 SPSB2Q99619 263 aa7.71□□□□□ -1.18
LRCH3-217ENST00000483442 ZNF598Q86UK7 904 aaKnown RBP7.7□□□□□ -1.18
LRCH3-217ENST00000483442 FAM160A2Q8N612 972 aaPredicted RBP7.7□□□□□ -1.18
LRCH3-217ENST00000483442 SLC27A5Q9Y2P5 690 aa7.7□□□□□ -1.18
LRCH3-217ENST00000483442 NACADO15069 1562 aa7.7□□□□□ -1.18
LRCH3-217ENST00000483442 GDF9O60383 454 aa7.68□□□□□ -1.18
LRCH3-217ENST00000483442 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
LRCH3-217ENST00000483442 RSPH4AQ5TD94 716 aa7.68□□□□□ -1.18
LRCH3-217ENST00000483442 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
LRCH3-217ENST00000483442 PRDM9Q9NQV7 894 aa7.68□□□□□ -1.18
LRCH3-217ENST00000483442 TNFRSF10AO00220 468 aa7.67□□□□□ -1.18
LRCH3-217ENST00000483442 BRICD5Q6PL45 260 aa7.66□□□□□ -1.18
LRCH3-217ENST00000483442 RNF19BQ6ZMZ0 732 aa7.66□□□□□ -1.18
LRCH3-217ENST00000483442 VSIG10Q8N0Z9 540 aa7.66□□□□□ -1.18
LRCH3-217ENST00000483442 IRF6O14896 467 aa7.65□□□□□ -1.18
LRCH3-217ENST00000483442 PRR20EP86478 221 aa7.65□□□□□ -1.18
LRCH3-217ENST00000483442 PRR20CP86479 221 aa7.65□□□□□ -1.18
LRCH3-217ENST00000483442 PRR20DP86480 221 aa7.65□□□□□ -1.18
LRCH3-217ENST00000483442 PRR20BP86481 221 aa7.65□□□□□ -1.18
LRCH3-217ENST00000483442 PRR20AP86496 221 aa7.65□□□□□ -1.18
LRCH3-217ENST00000483442 HLA-CQ95604 372 aa7.65□□□□□ -1.18
LRCH3-217ENST00000483442 PKD2L1Q9P0L9 805 aa7.65□□□□□ -1.18
LRCH3-217ENST00000483442 CECR2Q9BXF3 1484 aa7.64□□□□□ -1.19
LRCH3-217ENST00000483442 CD46P15529 392 aa7.64□□□□□ -1.19
LRCH3-217ENST00000483442 MYT1Q01538 1121 aa7.64□□□□□ -1.19
LRCH3-217ENST00000483442 MAP2K5Q13163 448 aa7.64□□□□□ -1.19
LRCH3-217ENST00000483442 SULF1Q8IWU6 871 aa7.64□□□□□ -1.19
LRCH3-217ENST00000483442 FCF1Q9Y324 198 aaKnown RBP7.64□□□□□ -1.19
LRCH3-217ENST00000483442 FMNL1O95466 1100 aaPredicted RBP7.63□□□□□ -1.19
LRCH3-217ENST00000483442 POTECB2RU33 542 aa7.62□□□□□ -1.19
LRCH3-217ENST00000483442 MDM2Q00987 491 aaPredicted RBP7.62□□□□□ -1.19
LRCH3-217ENST00000483442 ZNF787Q6DD87 383 aa7.62□□□□□ -1.19
LRCH3-217ENST00000483442 BICRAQ9NZM4 1560 aa7.62□□□□□ -1.19
LRCH3-217ENST00000483442 FOXC1Q12948 553 aa7.61□□□□□ -1.19
LRCH3-217ENST00000483442 CCDC102AQ96A19 550 aa7.61□□□□□ -1.19
LRCH3-217ENST00000483442 SALL2Q9Y467 1007 aaPredicted RBP7.61□□□□□ -1.19
LRCH3-217ENST00000483442 FAM187AA6NFU0 413 aa7.6□□□□□ -1.19
LRCH3-217ENST00000483442 DGAT1O75907 488 aa7.6□□□□□ -1.19
LRCH3-217ENST00000483442 PKDCCQ504Y2 493 aa7.6□□□□□ -1.19
LRCH3-217ENST00000483442 MINK1Q8N4C8 1332 aaPredicted RBP7.59□□□□□ -1.19
LRCH3-217ENST00000483442 UNC13AQ9UPW8 1703 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms