RNA–Protein interactions for RNA: ENST00000483146.1

COMMD2-204, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-204ENST00000483146 PXYLP1Q8TE99 480 aa13.41□□□□□ -0.26
COMMD2-204ENST00000483146 TJAP1Q5JTD0 557 aa13.4□□□□□ -0.26
COMMD2-204ENST00000483146 MTRQ99707 1265 aa13.4□□□□□ -0.26
COMMD2-204ENST00000483146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.38□□□□□ -0.27
COMMD2-204ENST00000483146 METTL3Q86U44 580 aaKnown RBP13.38□□□□□ -0.27
COMMD2-204ENST00000483146 IL21Q9HBE4 155 aa13.36□□□□□ -0.27
COMMD2-204ENST00000483146 COPS2P61201 443 aa13.34□□□□□ -0.27
COMMD2-204ENST00000483146 ZNF516Q92618 1163 aa13.34□□□□□ -0.27
COMMD2-204ENST00000483146 NLRP7Q8WX94 980 aa13.32□□□□□ -0.28
COMMD2-204ENST00000483146 PRR14Q9BWN1 585 aa13.31□□□□□ -0.28
COMMD2-204ENST00000483146 SLC10A3P09131 477 aa13.3□□□□□ -0.28
COMMD2-204ENST00000483146 PCDHB3Q9Y5E6 796 aa13.3□□□□□ -0.28
COMMD2-204ENST00000483146 RGS20O76081 388 aa13.29□□□□□ -0.28
COMMD2-204ENST00000483146 CFHP08603 1231 aa13.29□□□□□ -0.28
COMMD2-204ENST00000483146 KMT5BQ4FZB7 885 aa13.28□□□□□ -0.28
COMMD2-204ENST00000483146 PHOX2BQ99453 314 aa13.27□□□□□ -0.29
COMMD2-204ENST00000483146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.26□□□□□ -0.29
COMMD2-204ENST00000483146 NKX2-3Q8TAU0 364 aa13.26□□□□□ -0.29
COMMD2-204ENST00000483146 BLOC1S3Q6QNY0 202 aa13.25□□□□□ -0.29
COMMD2-204ENST00000483146 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
COMMD2-204ENST00000483146 ACTN4O43707 911 aaKnown RBP13.24□□□□□ -0.29
COMMD2-204ENST00000483146 ZPR1O75312 459 aa13.23□□□□□ -0.29
COMMD2-204ENST00000483146 RSPH4AQ5TD94 716 aa13.23□□□□□ -0.29
COMMD2-204ENST00000483146 DDX11L8A8MPP1 907 aa13.22□□□□□ -0.29
COMMD2-204ENST00000483146 MAP2K5Q13163 448 aa13.22□□□□□ -0.29
COMMD2-204ENST00000483146 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
COMMD2-204ENST00000483146 RDH13Q8NBN7 331 aa13.22□□□□□ -0.29
COMMD2-204ENST00000483146 LMOD2Q6P5Q4 547 aa13.21□□□□□ -0.29
COMMD2-204ENST00000483146 IRF6O14896 467 aa13.19□□□□□ -0.3
COMMD2-204ENST00000483146 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
COMMD2-204ENST00000483146 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
COMMD2-204ENST00000483146 TLL1O43897 1013 aa13.16□□□□□ -0.3
COMMD2-204ENST00000483146 PUS10Q3MIT2 529 aaKnown RBP13.16□□□□□ -0.3
COMMD2-204ENST00000483146 SULF1Q8IWU6 871 aa13.15□□□□□ -0.3
COMMD2-204ENST00000483146 CCDC102AQ96A19 550 aa13.14□□□□□ -0.31
COMMD2-204ENST00000483146 GGCXP38435 758 aa13.13□□□□□ -0.31
COMMD2-204ENST00000483146 NR1I2O75469 434 aa13.12□□□□□ -0.31
COMMD2-204ENST00000483146 IRX2Q9BZI1 471 aaPredicted RBP13.12□□□□□ -0.31
COMMD2-204ENST00000483146 MDM2Q00987 491 aaPredicted RBP13.11□□□□□ -0.31
COMMD2-204ENST00000483146 GCGRP47871 477 aa13.1□□□□□ -0.31
COMMD2-204ENST00000483146 FUT2Q10981 343 aa13.1□□□□□ -0.31
COMMD2-204ENST00000483146 SCUBE3Q8IX30 993 aa13.1□□□□□ -0.31
COMMD2-204ENST00000483146 PRKD2Q9BZL6 878 aa13.1□□□□□ -0.31
COMMD2-204ENST00000483146 KRI1Q8N9T8 703 aaKnown RBP13.09□□□□□ -0.31
COMMD2-204ENST00000483146 ZC3H15Q8WU90 426 aaKnown RBP13.06□□□□□ -0.32
COMMD2-204ENST00000483146 TMUB1Q9BVT8 246 aa13.06□□□□□ -0.32
COMMD2-204ENST00000483146 S1PR4O95977 384 aa13.05□□□□□ -0.32
COMMD2-204ENST00000483146 ADH1BP00325 375 aa13.05□□□□□ -0.32
COMMD2-204ENST00000483146 ATP6V1AP38606 617 aa13.05□□□□□ -0.32
COMMD2-204ENST00000483146 MORN1Q5T089 497 aa13.05□□□□□ -0.32
COMMD2-204ENST00000483146 RNF223E7ERA6 249 aa13.04□□□□□ -0.32
COMMD2-204ENST00000483146 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
COMMD2-204ENST00000483146 PPEF1O14829 653 aaPredicted RBP13.03□□□□□ -0.32
COMMD2-204ENST00000483146 CD46P15529 392 aa13.03□□□□□ -0.32
COMMD2-204ENST00000483146 ZMYND10O75800 440 aa13.02□□□□□ -0.33
COMMD2-204ENST00000483146 SPSB2Q99619 263 aa13.02□□□□□ -0.33
COMMD2-204ENST00000483146 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
COMMD2-204ENST00000483146 SLC27A5Q9Y2P5 690 aa13.01□□□□□ -0.33
COMMD2-204ENST00000483146 V9GY48 417 aaPredicted RBP13.01□□□□□ -0.33
COMMD2-204ENST00000483146 CLCN1P35523 988 aa13□□□□□ -0.33
COMMD2-204ENST00000483146 SLC6A16Q9GZN6 736 aa13□□□□□ -0.33
COMMD2-204ENST00000483146 GRIPAP1Q4V328 841 aa12.98□□□□□ -0.33
COMMD2-204ENST00000483146 ANKLE1Q8NAG6 615 aa12.97□□□□□ -0.33
COMMD2-204ENST00000483146 KDM4AO75164 1064 aa12.96□□□□□ -0.33
COMMD2-204ENST00000483146 THAP11Q96EK4 314 aa12.96□□□□□ -0.33
COMMD2-204ENST00000483146 REPIN1Q9BWE0 567 aaKnown RBP12.96□□□□□ -0.33
COMMD2-204ENST00000483146 FAM217BQ9NTX9 383 aaPredicted RBP12.96□□□□□ -0.33
COMMD2-204ENST00000483146 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
COMMD2-204ENST00000483146 GFRA3O60609 400 aa12.93□□□□□ -0.34
COMMD2-204ENST00000483146 SLC19A1P41440 591 aa12.93□□□□□ -0.34
COMMD2-204ENST00000483146 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
COMMD2-204ENST00000483146 BRICD5Q6PL45 260 aa12.92□□□□□ -0.34
COMMD2-204ENST00000483146 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
COMMD2-204ENST00000483146 RNF19BQ6ZMZ0 732 aa12.91□□□□□ -0.34
COMMD2-204ENST00000483146 FAM160A2Q8N612 972 aaPredicted RBP12.91□□□□□ -0.34
COMMD2-204ENST00000483146 HLA-CQ95604 372 aa12.91□□□□□ -0.34
COMMD2-204ENST00000483146 SSTR3P32745 418 aaPredicted RBP12.9□□□□□ -0.34
COMMD2-204ENST00000483146 Q6ZNB5 142 aa12.9□□□□□ -0.34
COMMD2-204ENST00000483146 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
COMMD2-204ENST00000483146 USP46P62068 366 aa12.89□□□□□ -0.35
COMMD2-204ENST00000483146 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
COMMD2-204ENST00000483146 LIAT1Q6ZQX7 453 aa12.88□□□□□ -0.35
COMMD2-204ENST00000483146 PRDM9Q9NQV7 894 aa12.88□□□□□ -0.35
COMMD2-204ENST00000483146 LAPTM4AQ15012 233 aa12.87□□□□□ -0.35
COMMD2-204ENST00000483146 AMHR2Q16671 573 aa12.87□□□□□ -0.35
COMMD2-204ENST00000483146 Q3C1V9 767 aa12.87□□□□□ -0.35
COMMD2-204ENST00000483146 NUTM1Q86Y26 1132 aa12.87□□□□□ -0.35
COMMD2-204ENST00000483146 HOXA2O43364 376 aa12.86□□□□□ -0.35
COMMD2-204ENST00000483146 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
COMMD2-204ENST00000483146 GUCA2AQ02747 115 aa12.86□□□□□ -0.35
COMMD2-204ENST00000483146 SPRYD7Q5W111 196 aa12.86□□□□□ -0.35
COMMD2-204ENST00000483146 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
COMMD2-204ENST00000483146 FCF1Q9Y324 198 aaKnown RBP12.85□□□□□ -0.35
COMMD2-204ENST00000483146 TRIM66O15016 1216 aa12.84□□□□□ -0.35
COMMD2-204ENST00000483146 GIGYF2Q6Y7W6 1299 aaKnown RBP12.84□□□□□ -0.35
COMMD2-204ENST00000483146 AK7Q96M32 723 aa12.83□□□□□ -0.36
COMMD2-204ENST00000483146 NRG2O14511 850 aaPredicted RBP12.82□□□□□ -0.36
COMMD2-204ENST00000483146 MSS51Q4VC12 460 aa12.82□□□□□ -0.36
COMMD2-204ENST00000483146 ZNF598Q86UK7 904 aaKnown RBP12.82□□□□□ -0.36
COMMD2-204ENST00000483146 ZNF697Q5TEC3 545 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms