RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 SKIV2LQ15477 1246 aaKnown RBP7.67□□□□□ -1.18
R3HDM1-216ENST00000483065 FBXO22Q8NEZ5 403 aa7.67□□□□□ -1.18
R3HDM1-216ENST00000483065 CHMP4AQ9BY43 222 aa7.67□□□□□ -1.18
R3HDM1-216ENST00000483065 BANK1Q8NDB2 785 aa7.66□□□□□ -1.18
R3HDM1-216ENST00000483065 CALR3Q96L12 384 aaKnown RBP7.66□□□□□ -1.18
R3HDM1-216ENST00000483065 GNPATO15228 680 aa7.65□□□□□ -1.18
R3HDM1-216ENST00000483065 HIC1Q14526 733 aa7.65□□□□□ -1.18
R3HDM1-216ENST00000483065 FAM177A1Q8N128 213 aaPredicted RBP7.65□□□□□ -1.18
R3HDM1-216ENST00000483065 NUTM2FA1L443 756 aa7.64□□□□□ -1.19
R3HDM1-216ENST00000483065 NRG2O14511 850 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-216ENST00000483065 GPR37O15354 613 aa7.64□□□□□ -1.19
R3HDM1-216ENST00000483065 PDIA6Q15084 440 aa7.64□□□□□ -1.19
R3HDM1-216ENST00000483065 GIGYF2Q6Y7W6 1299 aaKnown RBP7.64□□□□□ -1.19
R3HDM1-216ENST00000483065 SND1Q7KZF4 910 aaKnown RBP eCLIP7.64□□□□□ -1.19
R3HDM1-216ENST00000483065 CCDC125Q86Z20 511 aa7.63□□□□□ -1.19
R3HDM1-216ENST00000483065 PBXIP1Q96AQ6 731 aa7.63□□□□□ -1.19
R3HDM1-216ENST00000483065 POM121Q96HA1 1249 aa7.63□□□□□ -1.19
R3HDM1-216ENST00000483065 COG6Q9Y2V7 657 aa7.63□□□□□ -1.19
R3HDM1-216ENST00000483065 FCHSD2O94868 740 aa7.62□□□□□ -1.19
R3HDM1-216ENST00000483065 NCLP19338 710 aaKnown RBP7.62□□□□□ -1.19
R3HDM1-216ENST00000483065 ERCC3P19447 782 aa7.62□□□□□ -1.19
R3HDM1-216ENST00000483065 B4GALNT3Q6L9W6 998 aa7.62□□□□□ -1.19
R3HDM1-216ENST00000483065 TREML4Q6UXN2 200 aa7.62□□□□□ -1.19
R3HDM1-216ENST00000483065 STAC3Q96MF2 364 aa7.61□□□□□ -1.19
R3HDM1-216ENST00000483065 POLR3GLQ9BT43 218 aa7.61□□□□□ -1.19
R3HDM1-216ENST00000483065 EFCAB3Q8N7B9 438 aa7.6□□□□□ -1.19
R3HDM1-216ENST00000483065 PHF8Q9UPP1 1060 aa7.6□□□□□ -1.19
R3HDM1-216ENST00000483065 PPM1GO15355 546 aaPredicted RBP7.59□□□□□ -1.19
R3HDM1-216ENST00000483065 CLCN1P35523 988 aa7.59□□□□□ -1.19
R3HDM1-216ENST00000483065 LHX6Q9UPM6 363 aa7.59□□□□□ -1.19
R3HDM1-216ENST00000483065 TMEM259Q4ZIN3 620 aa7.58□□□□□ -1.2
R3HDM1-216ENST00000483065 PPP1R15BQ5SWA1 713 aa7.58□□□□□ -1.2
R3HDM1-216ENST00000483065 DMRTA1Q5VZB9 504 aa7.58□□□□□ -1.2
R3HDM1-216ENST00000483065 RBM47A0AV96 593 aaKnown RBP7.57□□□□□ -1.2
R3HDM1-216ENST00000483065 DPYSL4O14531 572 aa7.57□□□□□ -1.2
R3HDM1-216ENST00000483065 MS4A1P11836 297 aa7.57□□□□□ -1.2
R3HDM1-216ENST00000483065 IVNS1ABPQ9Y6Y0 642 aa7.57□□□□□ -1.2
R3HDM1-216ENST00000483065 CABP2Q9NPB3 220 aa7.56□□□□□ -1.2
R3HDM1-216ENST00000483065 ITGBL1O95965 494 aaPredicted RBP7.55□□□□□ -1.2
R3HDM1-216ENST00000483065 NUDT7P0C024 238 aa7.55□□□□□ -1.2
R3HDM1-216ENST00000483065 DIXDC1Q155Q3 683 aa7.55□□□□□ -1.2
R3HDM1-216ENST00000483065 THSD4Q6ZMP0 1018 aa7.55□□□□□ -1.2
R3HDM1-216ENST00000483065 SOCS7O14512 581 aa7.54□□□□□ -1.2
R3HDM1-216ENST00000483065 GLMNQ92990 594 aa7.54□□□□□ -1.2
R3HDM1-216ENST00000483065 BRD2P25440 801 aaKnown RBP7.53□□□□□ -1.2
R3HDM1-216ENST00000483065 DRC1Q96MC2 740 aa7.53□□□□□ -1.2
R3HDM1-216ENST00000483065 BCL11AQ9H165 835 aa7.53□□□□□ -1.2
R3HDM1-216ENST00000483065 GPCPD1Q9NPB8 672 aa7.53□□□□□ -1.2
R3HDM1-216ENST00000483065 TSR1Q2NL82 804 aaKnown RBP7.52□□□□□ -1.21
R3HDM1-216ENST00000483065 OXER1Q8TDS5 423 aa7.52□□□□□ -1.21
R3HDM1-216ENST00000483065 GPHNQ9NQX3 736 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-216ENST00000483065 TBC1D12O60347 775 aa7.51□□□□□ -1.21
R3HDM1-216ENST00000483065 VRTNQ9H8Y1 702 aa7.51□□□□□ -1.21
R3HDM1-216ENST00000483065 IGSF5Q9NSI5 407 aa7.51□□□□□ -1.21
R3HDM1-216ENST00000483065 GRXCR2A6NFK2 248 aa7.5□□□□□ -1.21
R3HDM1-216ENST00000483065 PSEN2P49810 448 aa7.5□□□□□ -1.21
R3HDM1-216ENST00000483065 ANKRD13AQ8IZ07 590 aa7.5□□□□□ -1.21
R3HDM1-216ENST00000483065 SSTR3P32745 418 aaPredicted RBP7.49□□□□□ -1.21
R3HDM1-216ENST00000483065 C8orf37Q96NL8 207 aa7.49□□□□□ -1.21
R3HDM1-216ENST00000483065 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.49□□□□□ -1.21
R3HDM1-216ENST00000483065 GNEQ9Y223 722 aaKnown RBP7.49□□□□□ -1.21
R3HDM1-216ENST00000483065 RFC5P40937 340 aa7.48□□□□□ -1.21
R3HDM1-216ENST00000483065 MICALL2Q8IY33 904 aa7.48□□□□□ -1.21
R3HDM1-216ENST00000483065 CCER1Q8TC90 406 aaPredicted RBP7.48□□□□□ -1.21
R3HDM1-216ENST00000483065 SREK1Q8WXA9 508 aaKnown RBP7.48□□□□□ -1.21
R3HDM1-216ENST00000483065 BEGAINQ9BUH8 593 aa7.48□□□□□ -1.21
R3HDM1-216ENST00000483065 POLR3EQ9NVU0 708 aa7.48□□□□□ -1.21
R3HDM1-216ENST00000483065 ABL2P42684 1182 aa7.47□□□□□ -1.21
R3HDM1-216ENST00000483065 CLK2P49760 499 aaKnown RBP7.47□□□□□ -1.21
R3HDM1-216ENST00000483065 MRRFQ96E11 262 aaKnown RBP7.47□□□□□ -1.21
R3HDM1-216ENST00000483065 SIRT1Q96EB6 747 aa7.47□□□□□ -1.21
R3HDM1-216ENST00000483065 SPATA32Q96LK8 384 aa7.47□□□□□ -1.21
R3HDM1-216ENST00000483065 GDPD2Q9HCC8 539 aa7.47□□□□□ -1.21
R3HDM1-216ENST00000483065 SNRKQ9NRH2 765 aa7.47□□□□□ -1.21
R3HDM1-216ENST00000483065 SF3A1Q15459 793 aaKnown RBP7.46□□□□□ -1.22
R3HDM1-216ENST00000483065 WASHC4Q2M389 1173 aa7.46□□□□□ -1.22
R3HDM1-216ENST00000483065 PROCA1Q8NCQ7 364 aaPredicted RBP7.46□□□□□ -1.22
R3HDM1-216ENST00000483065 UNCXA6NJT0 531 aa7.45□□□□□ -1.22
R3HDM1-216ENST00000483065 ARID4BQ4LE39 1312 aaPredicted RBP7.45□□□□□ -1.22
R3HDM1-216ENST00000483065 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.44□□□□□ -1.22
R3HDM1-216ENST00000483065 TCF3P15923 654 aa7.44□□□□□ -1.22
R3HDM1-216ENST00000483065 RFX1P22670 979 aa7.44□□□□□ -1.22
R3HDM1-216ENST00000483065 MAP3K9P80192 1104 aa7.44□□□□□ -1.22
R3HDM1-216ENST00000483065 UBXN4Q92575 508 aa7.44□□□□□ -1.22
R3HDM1-216ENST00000483065 TMUB1Q9BVT8 246 aa7.44□□□□□ -1.22
R3HDM1-216ENST00000483065 EMILIN3Q9NT22 766 aa7.44□□□□□ -1.22
R3HDM1-216ENST00000483065 POTECB2RU33 542 aa7.43□□□□□ -1.22
R3HDM1-216ENST00000483065 INSM1Q01101 510 aaPredicted RBP7.43□□□□□ -1.22
R3HDM1-216ENST00000483065 PPP2R2DQ66LE6 453 aa7.43□□□□□ -1.22
R3HDM1-216ENST00000483065 OSBPP22059 807 aa7.42□□□□□ -1.22
R3HDM1-216ENST00000483065 FECHP22830 423 aa7.42□□□□□ -1.22
R3HDM1-216ENST00000483065 MDM2Q00987 491 aaPredicted RBP7.42□□□□□ -1.22
R3HDM1-216ENST00000483065 MYSM1Q5VVJ2 828 aa7.42□□□□□ -1.22
R3HDM1-216ENST00000483065 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
R3HDM1-216ENST00000483065 PSDA5PKW4 1024 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-216ENST00000483065 ATG7O95352 703 aa7.41□□□□□ -1.22
R3HDM1-216ENST00000483065 ZC3H6P61129 1189 aaKnown RBP7.41□□□□□ -1.22
R3HDM1-216ENST00000483065 PTGDRQ13258 359 aa7.41□□□□□ -1.22
R3HDM1-216ENST00000483065 HDGFL1Q5TGJ6 251 aa7.41□□□□□ -1.22
R3HDM1-216ENST00000483065 TMC2Q8TDI7 906 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms