RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 ZNF335Q9H4Z2 1342 aaPredicted RBP19.69■□□□□ 0.74
COL21A1-209ENST00000482933 CFAP65Q6ZU64 1925 aaKnown RBP19.68■□□□□ 0.74
COL21A1-209ENST00000482933 CLEC11AQ9Y240 323 aa19.68■□□□□ 0.74
COL21A1-209ENST00000482933 NEURL4Q96JN8 1562 aa19.65■□□□□ 0.74
COL21A1-209ENST00000482933 LMTK2Q8IWU2 1503 aa19.64■□□□□ 0.74
COL21A1-209ENST00000482933 ANKRD50Q9ULJ7 1429 aa19.64■□□□□ 0.73
COL21A1-209ENST00000482933 MED14O60244 1454 aa19.63■□□□□ 0.73
COL21A1-209ENST00000482933 VWDEQ8N2E2 1590 aa19.63■□□□□ 0.73
COL21A1-209ENST00000482933 NPHP4O75161 1426 aaPredicted RBP19.61■□□□□ 0.73
COL21A1-209ENST00000482933 UBR1Q8IWV7 1749 aa19.6■□□□□ 0.73
COL21A1-209ENST00000482933 ROCK1Q13464 1354 aa19.58■□□□□ 0.73
COL21A1-209ENST00000482933 CPS1P31327 1500 aa19.58■□□□□ 0.72
COL21A1-209ENST00000482933 IQGAP1P46940 1657 aa19.57■□□□□ 0.72
COL21A1-209ENST00000482933 PPARGC1BQ86YN6 1023 aaKnown RBP19.57■□□□□ 0.72
COL21A1-209ENST00000482933 STAG3Q9UJ98 1225 aa19.57■□□□□ 0.72
COL21A1-209ENST00000482933 EFCAB6Q5THR3 1501 aa19.56■□□□□ 0.72
COL21A1-209ENST00000482933 SLIT1O75093 1534 aa19.55■□□□□ 0.72
COL21A1-209ENST00000482933 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
COL21A1-209ENST00000482933 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
COL21A1-209ENST00000482933 TXNDC2Q86VQ3 553 aa19.54■□□□□ 0.72
COL21A1-209ENST00000482933 EID1Q9Y6B2 187 aa19.54■□□□□ 0.72
COL21A1-209ENST00000482933 PIK3C2BO00750 1634 aa19.54■□□□□ 0.72
COL21A1-209ENST00000482933 RPRD2Q5VT52 1461 aaKnown RBP19.54■□□□□ 0.72
COL21A1-209ENST00000482933 ARHGAP23Q9P227 1491 aa19.54■□□□□ 0.72
COL21A1-209ENST00000482933 NOS1P29475 1434 aa19.53■□□□□ 0.72
COL21A1-209ENST00000482933 IDI1Q13907 227 aa19.53■□□□□ 0.72
COL21A1-209ENST00000482933 SLC52A1Q9NWF4 448 aa19.52■□□□□ 0.72
COL21A1-209ENST00000482933 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.72
COL21A1-209ENST00000482933 ITGAEP38570 1179 aa19.51■□□□□ 0.71
COL21A1-209ENST00000482933 UNC13BO14795 1591 aa19.51■□□□□ 0.71
COL21A1-209ENST00000482933 TMEM2Q9UHN6 1383 aa19.51■□□□□ 0.71
COL21A1-209ENST00000482933 LTKP29376 864 aa19.51■□□□□ 0.71
COL21A1-209ENST00000482933 TET3O43151 1660 aa19.5■□□□□ 0.71
COL21A1-209ENST00000482933 SYNMO15061 1565 aa19.5■□□□□ 0.71
COL21A1-209ENST00000482933 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
COL21A1-209ENST00000482933 TOM1O60784 492 aa19.47■□□□□ 0.71
COL21A1-209ENST00000482933 PRKAR2AP13861 404 aaKnown RBP19.46■□□□□ 0.71
COL21A1-209ENST00000482933 ADGRB3O60242 1522 aa19.45■□□□□ 0.7
COL21A1-209ENST00000482933 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
COL21A1-209ENST00000482933 IQGAP3Q86VI3 1631 aa19.43■□□□□ 0.7
COL21A1-209ENST00000482933 NUP155O75694 1391 aa19.43■□□□□ 0.7
COL21A1-209ENST00000482933 PRR29P0C7W0 189 aa19.42■□□□□ 0.7
COL21A1-209ENST00000482933 STRCP1A6NGW2 1772 aa19.41■□□□□ 0.7
COL21A1-209ENST00000482933 SPDYE4A6NLX3 237 aa19.41■□□□□ 0.7
COL21A1-209ENST00000482933 HAX1O00165 279 aa19.41■□□□□ 0.7
COL21A1-209ENST00000482933 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
COL21A1-209ENST00000482933 E9PCH4 1651 aa19.4■□□□□ 0.7
COL21A1-209ENST00000482933 LRRC7Q96NW7 1537 aa19.4■□□□□ 0.7
COL21A1-209ENST00000482933 PIP4K2BP78356 416 aa19.38■□□□□ 0.69
COL21A1-209ENST00000482933 SP7Q8TDD2 431 aaPredicted RBP19.38■□□□□ 0.69
COL21A1-209ENST00000482933 CHGAP10645 457 aaKnown RBP19.35■□□□□ 0.69
COL21A1-209ENST00000482933 BCANQ96GW7 911 aa19.35■□□□□ 0.69
COL21A1-209ENST00000482933 TMEM131LA2VDJ0 1609 aa19.35■□□□□ 0.69
COL21A1-209ENST00000482933 PPP1R15AO75807 674 aaPredicted RBP19.34■□□□□ 0.69
COL21A1-209ENST00000482933 MYO5BQ9ULV0 1848 aa19.34■□□□□ 0.69
COL21A1-209ENST00000482933 DISP3Q9P2K9 1392 aa19.34■□□□□ 0.69
COL21A1-209ENST00000482933 KCNA6P17658 529 aa19.34■□□□□ 0.69
COL21A1-209ENST00000482933 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.34■□□□□ 0.69
COL21A1-209ENST00000482933 SLC26A8Q96RN1 970 aa19.34■□□□□ 0.69
COL21A1-209ENST00000482933 ZFYVE9O95405 1425 aa19.33■□□□□ 0.69
COL21A1-209ENST00000482933 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.69
COL21A1-209ENST00000482933 PLEKHG1Q9ULL1 1385 aa19.31■□□□□ 0.68
COL21A1-209ENST00000482933 NAIPQ13075 1403 aa19.31■□□□□ 0.68
COL21A1-209ENST00000482933 HSPA1LP34931 641 aa19.3■□□□□ 0.68
COL21A1-209ENST00000482933 ALKQ9UM73 1620 aa19.29■□□□□ 0.68
COL21A1-209ENST00000482933 SPHKAPQ2M3C7 1700 aa19.27■□□□□ 0.68
COL21A1-209ENST00000482933 XIRP1Q702N8 1843 aaKnown RBP19.27■□□□□ 0.67
COL21A1-209ENST00000482933 PROSER2Q86WR7 435 aaPredicted RBP19.26■□□□□ 0.67
COL21A1-209ENST00000482933 HFM1A2PYH4 1435 aa19.26■□□□□ 0.67
COL21A1-209ENST00000482933 NKTRP30414 1462 aaKnown RBP19.26■□□□□ 0.67
COL21A1-209ENST00000482933 TMEM94Q12767 1356 aa19.26■□□□□ 0.67
COL21A1-209ENST00000482933 TBX22Q9Y458 520 aa19.25■□□□□ 0.67
COL21A1-209ENST00000482933 NWD1Q149M9 1564 aa19.25■□□□□ 0.67
COL21A1-209ENST00000482933 TRIM52Q96A61 297 aa19.24■□□□□ 0.67
COL21A1-209ENST00000482933 NUTM2DQ5VT03 806 aaPredicted RBP19.23■□□□□ 0.67
COL21A1-209ENST00000482933 CHADLQ6NUI6 762 aa19.22■□□□□ 0.67
COL21A1-209ENST00000482933 CHD2O14647 1828 aaKnown RBP19.22■□□□□ 0.67
COL21A1-209ENST00000482933 DIP2AQ14689 1571 aa19.21■□□□□ 0.67
COL21A1-209ENST00000482933 ZNF326Q5BKZ1 582 aaKnown RBP19.2■□□□□ 0.66
COL21A1-209ENST00000482933 PIK3R4Q99570 1358 aa19.2■□□□□ 0.66
COL21A1-209ENST00000482933 ADAMTS13Q76LX8 1427 aa19.2■□□□□ 0.66
COL21A1-209ENST00000482933 TRPM2O94759 1503 aa19.19■□□□□ 0.66
COL21A1-209ENST00000482933 RBM33Q96EV2 1170 aaKnown RBP19.18■□□□□ 0.66
COL21A1-209ENST00000482933 MSH6P52701 1360 aa19.18■□□□□ 0.66
COL21A1-209ENST00000482933 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
COL21A1-209ENST00000482933 ILDR2Q71H61 639 aa19.17■□□□□ 0.66
COL21A1-209ENST00000482933 CLTCL1P53675 1640 aa19.16■□□□□ 0.66
COL21A1-209ENST00000482933 NCOA3Q9Y6Q9 1424 aa19.16■□□□□ 0.66
COL21A1-209ENST00000482933 KIF1BO60333 1816 aa19.15■□□□□ 0.66
COL21A1-209ENST00000482933 C19orf67A6NJJ6 358 aa19.13■□□□□ 0.65
COL21A1-209ENST00000482933 MED1Q15648 1581 aaPredicted RBP19.12■□□□□ 0.65
COL21A1-209ENST00000482933 SETBP1Q9Y6X0 1596 aa19.11■□□□□ 0.65
COL21A1-209ENST00000482933 C14orf37Q86TY3 774 aa19.11■□□□□ 0.65
COL21A1-209ENST00000482933 AMOTL2Q9Y2J4 779 aa19.11■□□□□ 0.65
COL21A1-209ENST00000482933 NEXMIFQ5QGS0 1516 aa19.1■□□□□ 0.65
COL21A1-209ENST00000482933 ACIN1Q9UKV3 1341 aaKnown RBP19.1■□□□□ 0.65
COL21A1-209ENST00000482933 SLAIN2Q9P270 581 aa19.09■□□□□ 0.65
COL21A1-209ENST00000482933 ROBO1Q9Y6N7 1651 aa19.09■□□□□ 0.65
COL21A1-209ENST00000482933 NRXN3Q9Y4C0 1643 aa19.09■□□□□ 0.65
COL21A1-209ENST00000482933 PTPRUQ92729 1446 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms