RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.29□□□□□ -0.12
RPGR-208ENST00000482855 FAM135AQ9P2D6 1515 aa14.29□□□□□ -0.12
RPGR-208ENST00000482855 HECW2Q9P2P5 1572 aa14.28□□□□□ -0.12
RPGR-208ENST00000482855 ZNF518AQ6AHZ1 1483 aa14.28□□□□□ -0.12
RPGR-208ENST00000482855 MLH3Q9UHC1 1453 aa14.28□□□□□ -0.12
RPGR-208ENST00000482855 PER1O15534 1290 aaPredicted RBP14.27□□□□□ -0.12
RPGR-208ENST00000482855 AGLP35573 1532 aa14.27□□□□□ -0.13
RPGR-208ENST00000482855 CAMSAP2Q08AD1 1489 aa14.27□□□□□ -0.13
RPGR-208ENST00000482855 BECN1Q14457 450 aa14.27□□□□□ -0.13
RPGR-208ENST00000482855 CC2D1BQ5T0F9 858 aaKnown RBP14.27□□□□□ -0.13
RPGR-208ENST00000482855 ARHGEF5Q12774 1597 aa14.26□□□□□ -0.13
RPGR-208ENST00000482855 ZFYVE16Q7Z3T8 1539 aa14.26□□□□□ -0.13
RPGR-208ENST00000482855 INO80Q9ULG1 1556 aaPredicted RBP14.26□□□□□ -0.13
RPGR-208ENST00000482855 ADGRL2O95490 1459 aa14.26□□□□□ -0.13
RPGR-208ENST00000482855 SAMD9LQ8IVG5 1584 aa14.25□□□□□ -0.13
RPGR-208ENST00000482855 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
RPGR-208ENST00000482855 MAST1Q9Y2H9 1570 aa14.25□□□□□ -0.13
RPGR-208ENST00000482855 GPATCH8Q9UKJ3 1502 aaKnown RBP14.24□□□□□ -0.13
RPGR-208ENST00000482855 CROCC2H7BZ55 1655 aa14.24□□□□□ -0.13
RPGR-208ENST00000482855 ANKRD30AQ9BXX3 1397 aa14.24□□□□□ -0.13
RPGR-208ENST00000482855 ARHGAP5Q13017 1502 aa14.24□□□□□ -0.13
RPGR-208ENST00000482855 DUSP27Q5VZP5 1158 aa14.23□□□□□ -0.13
RPGR-208ENST00000482855 NAP1L5Q96NT1 182 aaPredicted RBP14.23□□□□□ -0.13
RPGR-208ENST00000482855 SLKQ9H2G2 1235 aaPredicted RBP14.23□□□□□ -0.13
RPGR-208ENST00000482855 ANKRD50Q9ULJ7 1429 aa14.23□□□□□ -0.13
RPGR-208ENST00000482855 PNNQ9H307 717 aaKnown RBP14.22□□□□□ -0.13
RPGR-208ENST00000482855 CFDP1Q9UEE9 299 aaPredicted RBP14.22□□□□□ -0.13
RPGR-208ENST00000482855 NUP155O75694 1391 aa14.22□□□□□ -0.13
RPGR-208ENST00000482855 USP19O94966 1318 aa14.22□□□□□ -0.13
RPGR-208ENST00000482855 ADAMTS8Q9UP79 889 aa14.21□□□□□ -0.14
RPGR-208ENST00000482855 EFCAB2Q5VUJ9 269 aa14.2□□□□□ -0.14
RPGR-208ENST00000482855 VSIG10Q8N0Z9 540 aa14.2□□□□□ -0.14
RPGR-208ENST00000482855 DIP2CQ9Y2E4 1556 aa14.2□□□□□ -0.14
RPGR-208ENST00000482855 TRPM1Q7Z4N2 1603 aa14.2□□□□□ -0.14
RPGR-208ENST00000482855 EIF3AQ14152 1382 aaKnown RBP14.2□□□□□ -0.14
RPGR-208ENST00000482855 PLEKHH1Q9ULM0 1364 aa14.2□□□□□ -0.14
RPGR-208ENST00000482855 KIDINS220Q9ULH0 1771 aa14.2□□□□□ -0.14
RPGR-208ENST00000482855 MROH2AA6NES4 1674 aa14.2□□□□□ -0.14
RPGR-208ENST00000482855 GOLGA2Q08379 1002 aa14.2□□□□□ -0.14
RPGR-208ENST00000482855 PLXNC1O60486 1568 aa14.2□□□□□ -0.14
RPGR-208ENST00000482855 RTEL1-TNFRSF6BF6WH68 1400 aa14.19□□□□□ -0.14
RPGR-208ENST00000482855 HSP90AA1P07900 732 aaKnown RBP14.19□□□□□ -0.14
RPGR-208ENST00000482855 HSP90AA2PQ14568 343 aaPredicted RBP14.19□□□□□ -0.14
RPGR-208ENST00000482855 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
RPGR-208ENST00000482855 GOLGA6L3A6NEY3 463 aa14.19□□□□□ -0.14
RPGR-208ENST00000482855 CLCN1P35523 988 aa14.19□□□□□ -0.14
RPGR-208ENST00000482855 ARXQ96QS3 562 aa14.19□□□□□ -0.14
RPGR-208ENST00000482855 PANK3Q9H999 370 aa14.19□□□□□ -0.14
RPGR-208ENST00000482855 WDR43Q15061 677 aaKnown RBP eCLIP14.18□□□□□ -0.14
RPGR-208ENST00000482855 C9orf84Q5VXU9 1444 aa14.18□□□□□ -0.14
RPGR-208ENST00000482855 RRP9O43818 475 aaKnown RBP14.18□□□□□ -0.14
RPGR-208ENST00000482855 ATP10AO60312 1499 aa14.17□□□□□ -0.14
RPGR-208ENST00000482855 KDM5DQ9BY66 1539 aa14.17□□□□□ -0.14
RPGR-208ENST00000482855 ABCA6Q8N139 1617 aa14.17□□□□□ -0.14
RPGR-208ENST00000482855 XRCC6P12956 609 aaKnown RBP eCLIP14.17□□□□□ -0.14
RPGR-208ENST00000482855 ZMYND15Q9H091 742 aa14.17□□□□□ -0.14
RPGR-208ENST00000482855 MAPK8IP3Q9UPT6 1336 aa14.17□□□□□ -0.14
RPGR-208ENST00000482855 ANTXR1Q9H6X2 564 aa14.16□□□□□ -0.14
RPGR-208ENST00000482855 ZNF521Q96K83 1311 aa14.16□□□□□ -0.14
RPGR-208ENST00000482855 SEC24BO95487 1268 aa14.16□□□□□ -0.14
RPGR-208ENST00000482855 DISP3Q9P2K9 1392 aa14.16□□□□□ -0.14
RPGR-208ENST00000482855 PRAG1Q86YV5 1406 aa14.16□□□□□ -0.14
RPGR-208ENST00000482855 SCAPERQ9BY12 1400 aa14.16□□□□□ -0.14
RPGR-208ENST00000482855 EIF2AK4Q9P2K8 1649 aaKnown RBP14.15□□□□□ -0.14
RPGR-208ENST00000482855 SLFN5Q08AF3 891 aa14.14□□□□□ -0.15
RPGR-208ENST00000482855 FSD2A1L4K1 749 aa14.14□□□□□ -0.15
RPGR-208ENST00000482855 UPF2Q9HAU5 1272 aaKnown RBP14.14□□□□□ -0.15
RPGR-208ENST00000482855 NLRP1Q9C000 1473 aa14.14□□□□□ -0.15
RPGR-208ENST00000482855 IGHDP01880 384 aa14.14□□□□□ -0.15
RPGR-208ENST00000482855 SHANK2Q9UPX8 1470 aa14.13□□□□□ -0.15
RPGR-208ENST00000482855 SIGLEC1Q9BZZ2 1709 aa14.13□□□□□ -0.15
RPGR-208ENST00000482855 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
RPGR-208ENST00000482855 RSPH4AQ5TD94 716 aa14.13□□□□□ -0.15
RPGR-208ENST00000482855 ERBINQ96RT1 1412 aa14.13□□□□□ -0.15
RPGR-208ENST00000482855 LAMC1P11047 1609 aa14.12□□□□□ -0.15
RPGR-208ENST00000482855 TESK2Q96S53 571 aa14.12□□□□□ -0.15
RPGR-208ENST00000482855 GPRASP1Q5JY77 1395 aa14.12□□□□□ -0.15
RPGR-208ENST00000482855 ATP7AQ04656 1500 aa14.12□□□□□ -0.15
RPGR-208ENST00000482855 NKTRP30414 1462 aaKnown RBP14.12□□□□□ -0.15
RPGR-208ENST00000482855 FER1L4A9Z1Z3 1794 aa14.12□□□□□ -0.15
RPGR-208ENST00000482855 PANK2Q9BZ23 570 aa14.12□□□□□ -0.15
RPGR-208ENST00000482855 CGNL1Q0VF96 1302 aa14.11□□□□□ -0.15
RPGR-208ENST00000482855 TMF1P82094 1093 aa14.11□□□□□ -0.15
RPGR-208ENST00000482855 PRDM15P57071 1507 aaPredicted RBP14.11□□□□□ -0.15
RPGR-208ENST00000482855 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
RPGR-208ENST00000482855 BCAR3O75815 825 aa14.1□□□□□ -0.15
RPGR-208ENST00000482855 PPP2R1AP30153 589 aa14.1□□□□□ -0.15
RPGR-208ENST00000482855 GZF1Q9H116 711 aaPredicted RBP14.1□□□□□ -0.15
RPGR-208ENST00000482855 MCM4P33991 863 aa14.1□□□□□ -0.15
RPGR-208ENST00000482855 TBC1D2Q9BYX2 928 aa14.1□□□□□ -0.15
RPGR-208ENST00000482855 TRMT2AQ8IZ69 625 aaKnown RBP14.1□□□□□ -0.15
RPGR-208ENST00000482855 MRE11P49959 708 aa14.09□□□□□ -0.15
RPGR-208ENST00000482855 CLUAP1Q96AJ1 413 aa14.09□□□□□ -0.15
RPGR-208ENST00000482855 CCDC144AA2RUR9 1427 aa14.09□□□□□ -0.15
RPGR-208ENST00000482855 RNF17Q9BXT8 1623 aaKnown RBP14.08□□□□□ -0.15
RPGR-208ENST00000482855 ZC3H13Q5T200 1668 aaKnown RBP14.08□□□□□ -0.16
RPGR-208ENST00000482855 TBC1D32Q96NH3 1257 aa14.08□□□□□ -0.16
RPGR-208ENST00000482855 CCDC141Q6ZP82 1450 aa14.08□□□□□ -0.16
RPGR-208ENST00000482855 KNSTRNQ9Y448 316 aa14.08□□□□□ -0.16
RPGR-208ENST00000482855 PDE3AQ14432 1141 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms