RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 EXOC6Q8TAG9 804 aa15.86■□□□□ 0.13
RAPGEF3-210ENST00000482843 ERICH6BQ5W0A0 696 aa15.85■□□□□ 0.13
RAPGEF3-210ENST00000482843 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
RAPGEF3-210ENST00000482843 RBM10P98175 930 aaKnown RBP15.84■□□□□ 0.13
RAPGEF3-210ENST00000482843 ASXL2Q76L83 1435 aa15.84■□□□□ 0.13
RAPGEF3-210ENST00000482843 MLECQ14165 292 aa15.83■□□□□ 0.13
RAPGEF3-210ENST00000482843 MYO5CQ9NQX4 1742 aa15.83■□□□□ 0.12
RAPGEF3-210ENST00000482843 WDR7Q9Y4E6 1490 aa15.82■□□□□ 0.12
RAPGEF3-210ENST00000482843 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
RAPGEF3-210ENST00000482843 AAMPQ13685 434 aa15.82■□□□□ 0.12
RAPGEF3-210ENST00000482843 ZCCHC11Q5TAX3 1644 aaKnown RBP15.82■□□□□ 0.12
RAPGEF3-210ENST00000482843 KCNA4P22459 653 aa15.81■□□□□ 0.12
RAPGEF3-210ENST00000482843 PPP2R1AP30153 589 aa15.81■□□□□ 0.12
RAPGEF3-210ENST00000482843 RRP1P56182 461 aaKnown RBP15.81■□□□□ 0.12
RAPGEF3-210ENST00000482843 ZMYND15Q9H091 742 aa15.81■□□□□ 0.12
RAPGEF3-210ENST00000482843 KDM5DQ9BY66 1539 aa15.81■□□□□ 0.12
RAPGEF3-210ENST00000482843 VSIG10Q8N0Z9 540 aa15.8■□□□□ 0.12
RAPGEF3-210ENST00000482843 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
RAPGEF3-210ENST00000482843 CD109Q6YHK3 1445 aa15.77■□□□□ 0.12
RAPGEF3-210ENST00000482843 EIF3AQ14152 1382 aaKnown RBP15.77■□□□□ 0.12
RAPGEF3-210ENST00000482843 SLC12A5Q9H2X9 1139 aa15.77■□□□□ 0.11
RAPGEF3-210ENST00000482843 APAF1O14727 1248 aa15.76■□□□□ 0.11
RAPGEF3-210ENST00000482843 MORC1Q86VD1 984 aa15.76■□□□□ 0.11
RAPGEF3-210ENST00000482843 PARD3Q8TEW0 1356 aa15.76■□□□□ 0.11
RAPGEF3-210ENST00000482843 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-210ENST00000482843 ABCC1P33527 1531 aa15.75■□□□□ 0.11
RAPGEF3-210ENST00000482843 GLIPR1L2Q4G1C9 344 aa15.75■□□□□ 0.11
RAPGEF3-210ENST00000482843 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-210ENST00000482843 GPRASP1Q5JY77 1395 aa15.74■□□□□ 0.11
RAPGEF3-210ENST00000482843 SHROOM2Q13796 1616 aa15.74■□□□□ 0.11
RAPGEF3-210ENST00000482843 BRD2P25440 801 aaKnown RBP15.74■□□□□ 0.11
RAPGEF3-210ENST00000482843 SKAP1Q86WV1 359 aa15.74■□□□□ 0.11
RAPGEF3-210ENST00000482843 MAST1Q9Y2H9 1570 aa15.74■□□□□ 0.11
RAPGEF3-210ENST00000482843 SRPK2P78362 688 aaKnown RBP15.73■□□□□ 0.11
RAPGEF3-210ENST00000482843 CENPJQ9HC77 1338 aaPredicted RBP15.73■□□□□ 0.11
RAPGEF3-210ENST00000482843 PDE3BQ13370 1112 aa15.73■□□□□ 0.11
RAPGEF3-210ENST00000482843 UGGT1Q9NYU2 1555 aa15.73■□□□□ 0.11
RAPGEF3-210ENST00000482843 COL17A1Q9UMD9 1497 aaPredicted RBP15.73■□□□□ 0.11
RAPGEF3-210ENST00000482843 CFAP65Q6ZU64 1925 aaKnown RBP15.72■□□□□ 0.11
RAPGEF3-210ENST00000482843 UHRF1BP1LA0JNW5 1464 aa15.72■□□□□ 0.11
RAPGEF3-210ENST00000482843 MSH5O43196 834 aa15.72■□□□□ 0.11
RAPGEF3-210ENST00000482843 ANP32AP39687 249 aaKnown RBP15.72■□□□□ 0.11
RAPGEF3-210ENST00000482843 CRBNQ96SW2 442 aa15.72■□□□□ 0.11
RAPGEF3-210ENST00000482843 ATP10AO60312 1499 aa15.72■□□□□ 0.11
RAPGEF3-210ENST00000482843 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
RAPGEF3-210ENST00000482843 NBR1Q14596 966 aa15.71■□□□□ 0.11
RAPGEF3-210ENST00000482843 LRPPRCP42704 1394 aaKnown RBP15.71■□□□□ 0.11
RAPGEF3-210ENST00000482843 POGKQ9P215 609 aa15.71■□□□□ 0.11
RAPGEF3-210ENST00000482843 FAM69CQ0P6D2 419 aa15.7■□□□□ 0.1
RAPGEF3-210ENST00000482843 RTEL1-TNFRSF6BF6WH68 1400 aa15.7■□□□□ 0.1
RAPGEF3-210ENST00000482843 ATP7AQ04656 1500 aa15.7■□□□□ 0.1
RAPGEF3-210ENST00000482843 CLASP1Q7Z460 1538 aa15.7■□□□□ 0.1
RAPGEF3-210ENST00000482843 NOS1P29475 1434 aa15.7■□□□□ 0.1
RAPGEF3-210ENST00000482843 CABP2Q9NPB3 220 aa15.7■□□□□ 0.1
RAPGEF3-210ENST00000482843 SCAF11Q99590 1463 aaKnown RBP15.69■□□□□ 0.1
RAPGEF3-210ENST00000482843 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF3-210ENST00000482843 STAC3Q96MF2 364 aa15.69■□□□□ 0.1
RAPGEF3-210ENST00000482843 C20orf194Q5TEA3 1177 aa15.69■□□□□ 0.1
RAPGEF3-210ENST00000482843 UNC13BO14795 1591 aa15.68■□□□□ 0.1
RAPGEF3-210ENST00000482843 FRAT1Q92837 279 aaPredicted RBP15.68■□□□□ 0.1
RAPGEF3-210ENST00000482843 NAP1L5Q96NT1 182 aaPredicted RBP15.67■□□□□ 0.1
RAPGEF3-210ENST00000482843 CARD14Q9BXL6 1004 aa15.67■□□□□ 0.1
RAPGEF3-210ENST00000482843 PLXNC1O60486 1568 aa15.67■□□□□ 0.1
RAPGEF3-210ENST00000482843 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
RAPGEF3-210ENST00000482843 IQGAP3Q86VI3 1631 aa15.67■□□□□ 0.1
RAPGEF3-210ENST00000482843 TRPM1Q7Z4N2 1603 aa15.67■□□□□ 0.1
RAPGEF3-210ENST00000482843 U2SURPO15042 1029 aaKnown RBP15.67■□□□□ 0.1
RAPGEF3-210ENST00000482843 ZFYVE16Q7Z3T8 1539 aa15.66■□□□□ 0.1
RAPGEF3-210ENST00000482843 ESF1Q9H501 851 aaKnown RBP15.66■□□□□ 0.1
RAPGEF3-210ENST00000482843 MAGI2Q86UL8 1455 aa15.66■□□□□ 0.1
RAPGEF3-210ENST00000482843 VGFO15240 615 aaPredicted RBP15.66■□□□□ 0.1
RAPGEF3-210ENST00000482843 IDI1Q13907 227 aa15.66■□□□□ 0.1
RAPGEF3-210ENST00000482843 FBXO31Q5XUX0 539 aaPredicted RBP15.66■□□□□ 0.1
RAPGEF3-210ENST00000482843 RGS3P49796 1198 aa15.64■□□□□ 0.09
RAPGEF3-210ENST00000482843 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF3-210ENST00000482843 U2AF1L5P0DN76 240 aaPredicted RBP15.64■□□□□ 0.09
RAPGEF3-210ENST00000482843 U2AF1Q01081 240 aaKnown RBP eCLIP15.64■□□□□ 0.09
RAPGEF3-210ENST00000482843 BCL2L13Q9BXK5 485 aa15.63■□□□□ 0.09
RAPGEF3-210ENST00000482843 ZNF518AQ6AHZ1 1483 aa15.62■□□□□ 0.09
RAPGEF3-210ENST00000482843 MTHFSP49914 203 aa15.62■□□□□ 0.09
RAPGEF3-210ENST00000482843 PRDM15P57071 1507 aaPredicted RBP15.62■□□□□ 0.09
RAPGEF3-210ENST00000482843 CFAP53Q96M91 514 aa15.61■□□□□ 0.09
RAPGEF3-210ENST00000482843 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
RAPGEF3-210ENST00000482843 FANCIQ9NVI1 1328 aa15.61■□□□□ 0.09
RAPGEF3-210ENST00000482843 GGNBP2Q9H3C7 697 aa15.61■□□□□ 0.09
RAPGEF3-210ENST00000482843 EIF2AK4Q9P2K8 1649 aaKnown RBP15.61■□□□□ 0.09
RAPGEF3-210ENST00000482843 POLR1AO95602 1720 aaPredicted RBP15.61■□□□□ 0.09
RAPGEF3-210ENST00000482843 CFAP44Q96MT7 982 aa15.61■□□□□ 0.09
RAPGEF3-210ENST00000482843 PLEKHH1Q9ULM0 1364 aa15.6■□□□□ 0.09
RAPGEF3-210ENST00000482843 BCAR3O75815 825 aa15.6■□□□□ 0.09
RAPGEF3-210ENST00000482843 PTPRTO14522 1441 aa15.6■□□□□ 0.09
RAPGEF3-210ENST00000482843 C14orf93Q9H972 538 aaKnown RBP15.59■□□□□ 0.09
RAPGEF3-210ENST00000482843 E9PCH4 1651 aa15.59■□□□□ 0.09
RAPGEF3-210ENST00000482843 RNF123Q5XPI4 1314 aa15.59■□□□□ 0.09
RAPGEF3-210ENST00000482843 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
RAPGEF3-210ENST00000482843 EVC2Q86UK5 1308 aa15.59■□□□□ 0.09
RAPGEF3-210ENST00000482843 NOP58Q9Y2X3 529 aaKnown RBP15.59■□□□□ 0.09
RAPGEF3-210ENST00000482843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.58■□□□□ 0.09
RAPGEF3-210ENST00000482843 NSD3Q9BZ95 1437 aa15.58■□□□□ 0.09
RAPGEF3-210ENST00000482843 CLTCL1P53675 1640 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms