RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 GDF9O60383 454 aa8.59□□□□□ -1.03
SNX27-205ENST00000482791 SWT1Q5T5J6 900 aaKnown RBP8.59□□□□□ -1.03
SNX27-205ENST00000482791 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
SNX27-205ENST00000482791 TLL1O43897 1013 aa8.58□□□□□ -1.04
SNX27-205ENST00000482791 GGCXP38435 758 aa8.58□□□□□ -1.04
SNX27-205ENST00000482791 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
SNX27-205ENST00000482791 ZNF598Q86UK7 904 aaKnown RBP8.58□□□□□ -1.04
SNX27-205ENST00000482791 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
SNX27-205ENST00000482791 NBPF26B4DH59 902 aa8.57□□□□□ -1.04
SNX27-205ENST00000482791 PDIA6Q15084 440 aa8.57□□□□□ -1.04
SNX27-205ENST00000482791 FAM187AA6NFU0 413 aa8.56□□□□□ -1.04
SNX27-205ENST00000482791 ARIH1Q9Y4X5 557 aaPredicted RBP8.56□□□□□ -1.04
SNX27-205ENST00000482791 E2F4Q16254 413 aa8.55□□□□□ -1.04
SNX27-205ENST00000482791 BLOC1S3Q6QNY0 202 aa8.55□□□□□ -1.04
SNX27-205ENST00000482791 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
SNX27-205ENST00000482791 PLA2G2CQ5R387 149 aa8.54□□□□□ -1.04
SNX27-205ENST00000482791 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
SNX27-205ENST00000482791 P3H3Q8IVL6 736 aa8.53□□□□□ -1.04
SNX27-205ENST00000482791 S1PR4O95977 384 aa8.52□□□□□ -1.05
SNX27-205ENST00000482791 NPDC1Q9NQX5 325 aaPredicted RBP8.52□□□□□ -1.05
SNX27-205ENST00000482791 LOC100996750A0A140TA64 210 aa8.51□□□□□ -1.05
SNX27-205ENST00000482791 OSBPP22059 807 aa8.51□□□□□ -1.05
SNX27-205ENST00000482791 KRTAP4-6Q9BYQ5 205 aa8.51□□□□□ -1.05
SNX27-205ENST00000482791 NFX1Q12986 1120 aaKnown RBP8.5□□□□□ -1.05
SNX27-205ENST00000482791 ANKLE1Q8NAG6 615 aa8.5□□□□□ -1.05
SNX27-205ENST00000482791 CERKQ8TCT0 537 aa8.5□□□□□ -1.05
SNX27-205ENST00000482791 PKD2L1Q9P0L9 805 aa8.5□□□□□ -1.05
SNX27-205ENST00000482791 KDM2AQ9Y2K7 1162 aa8.5□□□□□ -1.05
SNX27-205ENST00000482791 GRXCR2A6NFK2 248 aa8.49□□□□□ -1.05
SNX27-205ENST00000482791 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
SNX27-205ENST00000482791 WFS1O76024 890 aa8.48□□□□□ -1.05
SNX27-205ENST00000482791 PADI6Q6TGC4 694 aa8.48□□□□□ -1.05
SNX27-205ENST00000482791 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
SNX27-205ENST00000482791 EYA1Q99502 592 aa8.48□□□□□ -1.05
SNX27-205ENST00000482791 GMPR2Q9P2T1 348 aaKnown RBP8.48□□□□□ -1.05
SNX27-205ENST00000482791 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
SNX27-205ENST00000482791 SLF2Q8IX21 1173 aa8.47□□□□□ -1.05
SNX27-205ENST00000482791 SPDYE16A6NNV3 312 aaPredicted RBP8.46□□□□□ -1.06
SNX27-205ENST00000482791 KCNV2Q8TDN2 545 aa8.46□□□□□ -1.06
SNX27-205ENST00000482791 RBM27Q9P2N5 1060 aaKnown RBP8.46□□□□□ -1.06
SNX27-205ENST00000482791 SLC24A1O60721 1099 aa8.45□□□□□ -1.06
SNX27-205ENST00000482791 STK17AQ9UEE5 414 aa8.45□□□□□ -1.06
SNX27-205ENST00000482791 WIPF1O43516 503 aa8.44□□□□□ -1.06
SNX27-205ENST00000482791 CRIPAKQ8N1N5 446 aa8.43□□□□□ -1.06
SNX27-205ENST00000482791 FOXC1Q12948 553 aa8.42□□□□□ -1.06
SNX27-205ENST00000482791 AVPP01185 164 aa8.4□□□□□ -1.06
SNX27-205ENST00000482791 TOR4AQ9NXH8 423 aa8.4□□□□□ -1.06
SNX27-205ENST00000482791 C11orf95C9JLR9 678 aaPredicted RBP8.39□□□□□ -1.07
SNX27-205ENST00000482791 NECTIN2Q92692 538 aa8.38□□□□□ -1.07
SNX27-205ENST00000482791 ACTN4O43707 911 aaKnown RBP8.37□□□□□ -1.07
SNX27-205ENST00000482791 ADH1BP00325 375 aa8.36□□□□□ -1.07
SNX27-205ENST00000482791 SNRPBP14678 240 aaKnown RBP8.36□□□□□ -1.07
SNX27-205ENST00000482791 SLC10A3P09131 477 aa8.34□□□□□ -1.07
SNX27-205ENST00000482791 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
SNX27-205ENST00000482791 PRR14Q9BWN1 585 aa8.34□□□□□ -1.07
SNX27-205ENST00000482791 SLC6A16Q9GZN6 736 aa8.34□□□□□ -1.07
SNX27-205ENST00000482791 AXIN1O15169 862 aa8.33□□□□□ -1.08
SNX27-205ENST00000482791 CFHP08603 1231 aa8.32□□□□□ -1.08
SNX27-205ENST00000482791 INSM1Q01101 510 aaPredicted RBP8.32□□□□□ -1.08
SNX27-205ENST00000482791 FAM161AQ3B820 660 aa8.32□□□□□ -1.08
SNX27-205ENST00000482791 TMEM134Q9H6X4 195 aa8.32□□□□□ -1.08
SNX27-205ENST00000482791 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
SNX27-205ENST00000482791 TERTO14746 1132 aaKnown RBP8.3□□□□□ -1.08
SNX27-205ENST00000482791 SCUBE3Q8IX30 993 aa8.3□□□□□ -1.08
SNX27-205ENST00000482791 TESPA1A2RU30 521 aaPredicted RBP8.28□□□□□ -1.08
SNX27-205ENST00000482791 DNAJB2P25686 324 aa8.28□□□□□ -1.08
SNX27-205ENST00000482791 PUS10Q3MIT2 529 aaKnown RBP8.28□□□□□ -1.08
SNX27-205ENST00000482791 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
SNX27-205ENST00000482791 SEMA3EO15041 775 aa8.27□□□□□ -1.09
SNX27-205ENST00000482791 SMYD5Q6GMV2 418 aa8.27□□□□□ -1.09
SNX27-205ENST00000482791 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.09
SNX27-205ENST00000482791 ADGRG1Q9Y653 693 aa8.27□□□□□ -1.09
SNX27-205ENST00000482791 RCCD1A6NED2 376 aa8.26□□□□□ -1.09
SNX27-205ENST00000482791 CTC1Q2NKJ3 1217 aa8.26□□□□□ -1.09
SNX27-205ENST00000482791 CYP4X1Q8N118 509 aa8.26□□□□□ -1.09
SNX27-205ENST00000482791 NR1I2O75469 434 aa8.25□□□□□ -1.09
SNX27-205ENST00000482791 SMPD1P17405 629 aa8.25□□□□□ -1.09
SNX27-205ENST00000482791 SLC4A3P48751 1232 aa8.25□□□□□ -1.09
SNX27-205ENST00000482791 KMT5BQ4FZB7 885 aa8.25□□□□□ -1.09
SNX27-205ENST00000482791 MLLT3P42568 568 aaPredicted RBP8.24□□□□□ -1.09
SNX27-205ENST00000482791 RPIAP49247 311 aa8.24□□□□□ -1.09
SNX27-205ENST00000482791 SPSB2Q99619 263 aa8.24□□□□□ -1.09
SNX27-205ENST00000482791 FCF1Q9Y324 198 aaKnown RBP8.24□□□□□ -1.09
SNX27-205ENST00000482791 FAM160A2Q8N612 972 aaPredicted RBP8.23□□□□□ -1.09
SNX27-205ENST00000482791 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
SNX27-205ENST00000482791 THAP11Q96EK4 314 aa8.22□□□□□ -1.09
SNX27-205ENST00000482791 TRIM47Q96LD4 638 aa8.22□□□□□ -1.09
SNX27-205ENST00000482791 PTGDRQ13258 359 aa8.21□□□□□ -1.1
SNX27-205ENST00000482791 PRDM9Q9NQV7 894 aa8.21□□□□□ -1.1
SNX27-205ENST00000482791 J3QL48 77 aa8.2□□□□□ -1.1
SNX27-205ENST00000482791 SUZ12Q15022 739 aaKnown RBP8.2□□□□□ -1.1
SNX27-205ENST00000482791 GMPRP36959 345 aa8.19□□□□□ -1.1
SNX27-205ENST00000482791 RBM46Q8TBY0 533 aaKnown RBP8.19□□□□□ -1.1
SNX27-205ENST00000482791 CD2BP2O95400 341 aaKnown RBP8.18□□□□□ -1.1
SNX27-205ENST00000482791 HPS1Q92902 700 aa8.18□□□□□ -1.1
SNX27-205ENST00000482791 TTC24A2A3L6 582 aaPredicted RBP8.17□□□□□ -1.1
SNX27-205ENST00000482791 MORN1Q5T089 497 aa8.15□□□□□ -1.1
SNX27-205ENST00000482791 BCANQ96GW7 911 aa8.15□□□□□ -1.1
SNX27-205ENST00000482791 VEGFBP49765 207 aa8.14□□□□□ -1.11
SNX27-205ENST00000482791 SNIP1Q8TAD8 396 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms