RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 ARHGEF40Q8TER5 1519 aa20■□□□□ 0.79
ATG4B-220ENST00000482507 PER1O15534 1290 aaPredicted RBP20■□□□□ 0.79
ATG4B-220ENST00000482507 VWDEQ8N2E2 1590 aa20■□□□□ 0.79
ATG4B-220ENST00000482507 PARD3Q8TEW0 1356 aa20■□□□□ 0.79
ATG4B-220ENST00000482507 RNF17Q9BXT8 1623 aaKnown RBP19.97■□□□□ 0.79
ATG4B-220ENST00000482507 DISP3Q9P2K9 1392 aa19.97■□□□□ 0.79
ATG4B-220ENST00000482507 FBXO31Q5XUX0 539 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-220ENST00000482507 CCDC136Q96JN2 1154 aa19.97■□□□□ 0.79
ATG4B-220ENST00000482507 TESK2Q96S53 571 aa19.97■□□□□ 0.79
ATG4B-220ENST00000482507 ABCC3O15438 1527 aa19.96■□□□□ 0.79
ATG4B-220ENST00000482507 NPATQ14207 1427 aa19.96■□□□□ 0.79
ATG4B-220ENST00000482507 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
ATG4B-220ENST00000482507 NLRP13Q86W25 1043 aa19.95■□□□□ 0.78
ATG4B-220ENST00000482507 CEP152O94986 1710 aa19.94■□□□□ 0.78
ATG4B-220ENST00000482507 SALL2Q9Y467 1007 aaPredicted RBP19.94■□□□□ 0.78
ATG4B-220ENST00000482507 ESF1Q9H501 851 aaKnown RBP19.93■□□□□ 0.78
ATG4B-220ENST00000482507 AGLP35573 1532 aa19.93■□□□□ 0.78
ATG4B-220ENST00000482507 LAMC1P11047 1609 aa19.93■□□□□ 0.78
ATG4B-220ENST00000482507 TET3O43151 1660 aa19.92■□□□□ 0.78
ATG4B-220ENST00000482507 CFAP65Q6ZU64 1925 aaKnown RBP19.92■□□□□ 0.78
ATG4B-220ENST00000482507 REREQ9P2R6 1566 aa19.92■□□□□ 0.78
ATG4B-220ENST00000482507 EFCAB6Q5THR3 1501 aa19.91■□□□□ 0.78
ATG4B-220ENST00000482507 CHGAP10645 457 aaKnown RBP19.91■□□□□ 0.78
ATG4B-220ENST00000482507 ERICH6Q7L0X2 663 aa19.91■□□□□ 0.78
ATG4B-220ENST00000482507 LMTK2Q8IWU2 1503 aa19.9■□□□□ 0.78
ATG4B-220ENST00000482507 UGGT1Q9NYU2 1555 aa19.9■□□□□ 0.78
ATG4B-220ENST00000482507 RRP1P56182 461 aaKnown RBP19.9■□□□□ 0.78
ATG4B-220ENST00000482507 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
ATG4B-220ENST00000482507 PTPRTO14522 1441 aa19.9■□□□□ 0.78
ATG4B-220ENST00000482507 CEBPAP49715 358 aaPredicted RBP19.88■□□□□ 0.77
ATG4B-220ENST00000482507 PANK3Q9H999 370 aa19.88■□□□□ 0.77
ATG4B-220ENST00000482507 EXOC6Q8TAG9 804 aa19.87■□□□□ 0.77
ATG4B-220ENST00000482507 CDCA7LQ96GN5 454 aa19.87■□□□□ 0.77
ATG4B-220ENST00000482507 RCAN3Q9UKA8 241 aa19.86■□□□□ 0.77
ATG4B-220ENST00000482507 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
ATG4B-220ENST00000482507 ZMYM3Q14202 1370 aa19.85■□□□□ 0.77
ATG4B-220ENST00000482507 IDI1Q13907 227 aa19.84■□□□□ 0.77
ATG4B-220ENST00000482507 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.77
ATG4B-220ENST00000482507 TRPM2O94759 1503 aa19.83■□□□□ 0.76
ATG4B-220ENST00000482507 PAK3O75914 559 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-220ENST00000482507 BLMP54132 1417 aaPredicted RBP19.82■□□□□ 0.76
ATG4B-220ENST00000482507 TMF1P82094 1093 aa19.82■□□□□ 0.76
ATG4B-220ENST00000482507 PDE3BQ13370 1112 aa19.81■□□□□ 0.76
ATG4B-220ENST00000482507 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
ATG4B-220ENST00000482507 CLTCQ00610 1675 aaKnown RBP19.81■□□□□ 0.76
ATG4B-220ENST00000482507 ARHGAP31Q2M1Z3 1444 aa19.81■□□□□ 0.76
ATG4B-220ENST00000482507 CLTCL1P53675 1640 aa19.81■□□□□ 0.76
ATG4B-220ENST00000482507 SPHKAPQ2M3C7 1700 aa19.8■□□□□ 0.76
ATG4B-220ENST00000482507 NUTM2DQ5VT03 806 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-220ENST00000482507 NOS1P29475 1434 aa19.8■□□□□ 0.76
ATG4B-220ENST00000482507 NOP58Q9Y2X3 529 aaKnown RBP19.79■□□□□ 0.76
ATG4B-220ENST00000482507 MADDQ8WXG6 1647 aa19.78■□□□□ 0.76
ATG4B-220ENST00000482507 INSRP06213 1382 aa19.76■□□□□ 0.75
ATG4B-220ENST00000482507 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
ATG4B-220ENST00000482507 PLIN1O60240 522 aa19.75■□□□□ 0.75
ATG4B-220ENST00000482507 BCL11AQ9H165 835 aa19.75■□□□□ 0.75
ATG4B-220ENST00000482507 SYNMO15061 1565 aa19.74■□□□□ 0.75
ATG4B-220ENST00000482507 SLC52A1Q9NWF4 448 aa19.74■□□□□ 0.75
ATG4B-220ENST00000482507 IQGAP1P46940 1657 aa19.74■□□□□ 0.75
ATG4B-220ENST00000482507 ERVK-7P63135 1459 aa19.73■□□□□ 0.75
ATG4B-220ENST00000482507 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
ATG4B-220ENST00000482507 ADAMTS8Q9UP79 889 aa19.73■□□□□ 0.75
ATG4B-220ENST00000482507 ADGRF5Q8IZF2 1346 aa19.71■□□□□ 0.75
ATG4B-220ENST00000482507 IPO9Q96P70 1041 aaKnown RBP19.71■□□□□ 0.75
ATG4B-220ENST00000482507 AMER1Q5JTC6 1135 aaPredicted RBP19.7■□□□□ 0.74
ATG4B-220ENST00000482507 PREX1Q8TCU6 1659 aa19.69■□□□□ 0.74
ATG4B-220ENST00000482507 PPP2R1AP30153 589 aa19.69■□□□□ 0.74
ATG4B-220ENST00000482507 ANP32AP39687 249 aaKnown RBP19.69■□□□□ 0.74
ATG4B-220ENST00000482507 SCAF11Q99590 1463 aaKnown RBP19.67■□□□□ 0.74
ATG4B-220ENST00000482507 KNSTRNQ9Y448 316 aa19.67■□□□□ 0.74
ATG4B-220ENST00000482507 CRBNQ96SW2 442 aa19.66■□□□□ 0.74
ATG4B-220ENST00000482507 PLEKHH1Q9ULM0 1364 aa19.66■□□□□ 0.74
ATG4B-220ENST00000482507 TNRQ92752 1358 aa19.66■□□□□ 0.74
ATG4B-220ENST00000482507 TCERG1O14776 1098 aaKnown RBP19.65■□□□□ 0.74
ATG4B-220ENST00000482507 C20orf194Q5TEA3 1177 aa19.65■□□□□ 0.74
ATG4B-220ENST00000482507 SKAP1Q86WV1 359 aa19.65■□□□□ 0.74
ATG4B-220ENST00000482507 MROH2AA6NES4 1674 aa19.64■□□□□ 0.73
ATG4B-220ENST00000482507 NBR1Q14596 966 aa19.64■□□□□ 0.73
ATG4B-220ENST00000482507 CFAP70Q5T0N1 1121 aa19.64■□□□□ 0.73
ATG4B-220ENST00000482507 MYOM1P52179 1685 aa19.63■□□□□ 0.73
ATG4B-220ENST00000482507 SPATA31D1Q6ZQQ2 1576 aa19.63■□□□□ 0.73
ATG4B-220ENST00000482507 ADGRB3O60242 1522 aa19.63■□□□□ 0.73
ATG4B-220ENST00000482507 PDE4AP27815 886 aa19.63■□□□□ 0.73
ATG4B-220ENST00000482507 PIK3C2BO00750 1634 aa19.62■□□□□ 0.73
ATG4B-220ENST00000482507 KIF1BO60333 1816 aa19.61■□□□□ 0.73
ATG4B-220ENST00000482507 ZNF521Q96K83 1311 aa19.61■□□□□ 0.73
ATG4B-220ENST00000482507 FER1L4A9Z1Z3 1794 aa19.61■□□□□ 0.73
ATG4B-220ENST00000482507 ASXL1Q8IXJ9 1541 aa19.61■□□□□ 0.73
ATG4B-220ENST00000482507 DUSP27Q5VZP5 1158 aa19.6■□□□□ 0.73
ATG4B-220ENST00000482507 BACH2Q9BYV9 841 aa19.6■□□□□ 0.73
ATG4B-220ENST00000482507 ZBTB47Q9UFB7 747 aaPredicted RBP19.6■□□□□ 0.73
ATG4B-220ENST00000482507 NPM2Q86SE8 214 aaKnown RBP19.59■□□□□ 0.73
ATG4B-220ENST00000482507 WDR43Q15061 677 aaKnown RBP eCLIP19.59■□□□□ 0.73
ATG4B-220ENST00000482507 CDCA8Q53HL2 280 aa19.58■□□□□ 0.72
ATG4B-220ENST00000482507 RPGRIP1LQ68CZ1 1315 aa19.58■□□□□ 0.72
ATG4B-220ENST00000482507 VGFO15240 615 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-220ENST00000482507 DEKP35659 375 aaKnown RBP19.57■□□□□ 0.72
ATG4B-220ENST00000482507 STAC3Q96MF2 364 aa19.57■□□□□ 0.72
ATG4B-220ENST00000482507 C3P01024 1663 aa19.57■□□□□ 0.72
ATG4B-220ENST00000482507 MS4A1P11836 297 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms