RNA–Protein interactions for RNA: ENST00000482462.1

PDGFA-206, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best)

Gene PDGFA, Length 1,770 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-206ENST00000482462 CHGAP10645 457 aaKnown RBP26.53■■□□□ 1.84
PDGFA-206ENST00000482462 TNRQ92752 1358 aa26.52■■□□□ 1.84
PDGFA-206ENST00000482462 MYOM2P54296 1465 aa26.51■■□□□ 1.83
PDGFA-206ENST00000482462 KDM5AP29375 1690 aaKnown RBP26.5■■□□□ 1.83
PDGFA-206ENST00000482462 TRPM1Q7Z4N2 1603 aa26.49■■□□□ 1.83
PDGFA-206ENST00000482462 RALGAPBQ86X10 1494 aa26.49■■□□□ 1.83
PDGFA-206ENST00000482462 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
PDGFA-206ENST00000482462 PTPRMP28827 1452 aa26.49■■□□□ 1.83
PDGFA-206ENST00000482462 ZNF326Q5BKZ1 582 aaKnown RBP26.48■■□□□ 1.83
PDGFA-206ENST00000482462 ANP32CO43423 234 aa26.47■■□□□ 1.83
PDGFA-206ENST00000482462 CEBPAP49715 358 aaPredicted RBP26.46■■□□□ 1.83
PDGFA-206ENST00000482462 NEXMIFQ5QGS0 1516 aa26.46■■□□□ 1.83
PDGFA-206ENST00000482462 NLRP1Q9C000 1473 aa26.46■■□□□ 1.83
PDGFA-206ENST00000482462 A2ML1A8K2U0 1454 aa26.43■■□□□ 1.82
PDGFA-206ENST00000482462 KIAA1210Q9ULL0 1709 aa26.42■■□□□ 1.82
PDGFA-206ENST00000482462 NRXN1Q9ULB1 1477 aa26.42■■□□□ 1.82
PDGFA-206ENST00000482462 STAG3Q9UJ98 1225 aa26.42■■□□□ 1.82
PDGFA-206ENST00000482462 UBR1Q8IWV7 1749 aa26.42■■□□□ 1.82
PDGFA-206ENST00000482462 TSHZ2Q9NRE2 1034 aa26.39■■□□□ 1.82
PDGFA-206ENST00000482462 LAMC1P11047 1609 aa26.39■■□□□ 1.81
PDGFA-206ENST00000482462 MYO3AQ8NEV4 1616 aa26.39■■□□□ 1.81
PDGFA-206ENST00000482462 ZFYVE9O95405 1425 aa26.38■■□□□ 1.81
PDGFA-206ENST00000482462 SETD1BQ9UPS6 1966 aaKnown RBP26.38■■□□□ 1.81
PDGFA-206ENST00000482462 ROCK2O75116 1388 aaKnown RBP26.36■■□□□ 1.81
PDGFA-206ENST00000482462 ADGRF5Q8IZF2 1346 aa26.36■■□□□ 1.81
PDGFA-206ENST00000482462 VGFO15240 615 aaPredicted RBP26.35■■□□□ 1.81
PDGFA-206ENST00000482462 GPRASP1Q5JY77 1395 aa26.35■■□□□ 1.81
PDGFA-206ENST00000482462 PLPPR3Q6T4P5 718 aa26.34■■□□□ 1.81
PDGFA-206ENST00000482462 PIK3C2GO75747 1445 aa26.34■■□□□ 1.81
PDGFA-206ENST00000482462 EIF4G2P78344 907 aaKnown RBP eCLIP26.33■■□□□ 1.8
PDGFA-206ENST00000482462 CARD11Q9BXL7 1154 aa26.31■■□□□ 1.8
PDGFA-206ENST00000482462 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
PDGFA-206ENST00000482462 ZNF142P52746 1687 aaPredicted RBP26.3■■□□□ 1.8
PDGFA-206ENST00000482462 CEP170BQ9Y4F5 1589 aaPredicted RBP26.29■■□□□ 1.8
PDGFA-206ENST00000482462 NBPF1Q3BBV0 1214 aa26.28■■□□□ 1.8
PDGFA-206ENST00000482462 USP47Q96K76 1375 aa26.27■■□□□ 1.8
PDGFA-206ENST00000482462 NEFLP07196 543 aa26.27■■□□□ 1.8
PDGFA-206ENST00000482462 HSPA5P11021 654 aaKnown RBP26.27■■□□□ 1.8
PDGFA-206ENST00000482462 SETBP1Q9Y6X0 1596 aa26.27■■□□□ 1.8
PDGFA-206ENST00000482462 TMEM2Q9UHN6 1383 aa26.26■■□□□ 1.79
PDGFA-206ENST00000482462 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.25■■□□□ 1.79
PDGFA-206ENST00000482462 HDGFP51858 240 aaKnown RBP26.25■■□□□ 1.79
PDGFA-206ENST00000482462 IQGAP1P46940 1657 aa26.25■■□□□ 1.79
PDGFA-206ENST00000482462 FKBP8Q14318 412 aa26.24■■□□□ 1.79
PDGFA-206ENST00000482462 NUTM2DQ5VT03 806 aaPredicted RBP26.24■■□□□ 1.79
PDGFA-206ENST00000482462 SLIT1O75093 1534 aa26.23■■□□□ 1.79
PDGFA-206ENST00000482462 CFAP70Q5T0N1 1121 aa26.23■■□□□ 1.79
PDGFA-206ENST00000482462 HIRIP3Q9BW71 556 aaPredicted RBP26.23■■□□□ 1.79
PDGFA-206ENST00000482462 C14orf93Q9H972 538 aaKnown RBP26.23■■□□□ 1.79
PDGFA-206ENST00000482462 ARHGAP23Q9P227 1491 aa26.21■■□□□ 1.79
PDGFA-206ENST00000482462 THEMISQ8N1K5 641 aaPredicted RBP26.2■■□□□ 1.79
PDGFA-206ENST00000482462 LMTK3Q96Q04 1460 aa26.18■■□□□ 1.78
PDGFA-206ENST00000482462 ADGRB1O14514 1584 aa26.18■■□□□ 1.78
PDGFA-206ENST00000482462 SCAF11Q99590 1463 aaKnown RBP26.18■■□□□ 1.78
PDGFA-206ENST00000482462 POLR1AO95602 1720 aaPredicted RBP26.17■■□□□ 1.78
PDGFA-206ENST00000482462 ALKQ9UM73 1620 aa26.16■■□□□ 1.78
PDGFA-206ENST00000482462 NRXN3Q9Y4C0 1643 aa26.15■■□□□ 1.78
PDGFA-206ENST00000482462 SETD1AO15047 1707 aaKnown RBP26.15■■□□□ 1.78
PDGFA-206ENST00000482462 EID1Q9Y6B2 187 aa26.12■■□□□ 1.77
PDGFA-206ENST00000482462 WASHC2AQ641Q2 1341 aa26.11■■□□□ 1.77
PDGFA-206ENST00000482462 EIF3AQ14152 1382 aaKnown RBP26.11■■□□□ 1.77
PDGFA-206ENST00000482462 ASXL1Q8IXJ9 1541 aa26.11■■□□□ 1.77
PDGFA-206ENST00000482462 ST20-MTHFSA0A0A6YYL1 179 aa26.1■■□□□ 1.77
PDGFA-206ENST00000482462 PLEKHG1Q9ULL1 1385 aa26.1■■□□□ 1.77
PDGFA-206ENST00000482462 TXNDC2Q86VQ3 553 aa26.1■■□□□ 1.77
PDGFA-206ENST00000482462 LTKP29376 864 aa26.09■■□□□ 1.77
PDGFA-206ENST00000482462 HSPA2P54652 639 aa26.08■■□□□ 1.77
PDGFA-206ENST00000482462 TMEM132EQ6IEE7 984 aa26.05■■□□□ 1.76
PDGFA-206ENST00000482462 ARHGEF28Q8N1W1 1705 aaKnown RBP26.05■■□□□ 1.76
PDGFA-206ENST00000482462 BCANQ96GW7 911 aa26.04■■□□□ 1.76
PDGFA-206ENST00000482462 ERICH6BQ5W0A0 696 aa26.03■■□□□ 1.76
PDGFA-206ENST00000482462 ADAMTS13Q76LX8 1427 aa26.02■■□□□ 1.76
PDGFA-206ENST00000482462 SENP3Q9H4L4 574 aaPredicted RBP26.02■■□□□ 1.76
PDGFA-206ENST00000482462 DIP2AQ14689 1571 aa26.02■■□□□ 1.76
PDGFA-206ENST00000482462 CCDC7Q96M83 1385 aa26.01■■□□□ 1.75
PDGFA-206ENST00000482462 YTHDC2Q9H6S0 1430 aaKnown RBP26.01■■□□□ 1.75
PDGFA-206ENST00000482462 MED14O60244 1454 aa26■■□□□ 1.75
PDGFA-206ENST00000482462 ANKLE2Q86XL3 938 aa26■■□□□ 1.75
PDGFA-206ENST00000482462 TESK2Q96S53 571 aa26■■□□□ 1.75
PDGFA-206ENST00000482462 ANP32EQ9BTT0 268 aa26■■□□□ 1.75
PDGFA-206ENST00000482462 C11orf95C9JLR9 678 aaPredicted RBP25.99■■□□□ 1.75
PDGFA-206ENST00000482462 TRAK1Q9UPV9 953 aa25.99■■□□□ 1.75
PDGFA-206ENST00000482462 KNDC1Q76NI1 1749 aa25.98■■□□□ 1.75
PDGFA-206ENST00000482462 QRICH2Q9H0J4 1663 aa25.98■■□□□ 1.75
PDGFA-206ENST00000482462 LRPPRCP42704 1394 aaKnown RBP25.96■■□□□ 1.75
PDGFA-206ENST00000482462 SBNO2Q9Y2G9 1366 aa25.96■■□□□ 1.75
PDGFA-206ENST00000482462 DLC1Q96QB1 1528 aa25.96■■□□□ 1.75
PDGFA-206ENST00000482462 KIF7Q2M1P5 1343 aa25.96■■□□□ 1.75
PDGFA-206ENST00000482462 SLC24A1O60721 1099 aa25.96■■□□□ 1.75
PDGFA-206ENST00000482462 CENPJQ9HC77 1338 aaPredicted RBP25.95■■□□□ 1.74
PDGFA-206ENST00000482462 HNRNPUQ00839 825 aaKnown RBP eCLIP25.95■■□□□ 1.74
PDGFA-206ENST00000482462 METP08581 1390 aa25.94■■□□□ 1.74
PDGFA-206ENST00000482462 TMF1P82094 1093 aa25.92■■□□□ 1.74
PDGFA-206ENST00000482462 TBX22Q9Y458 520 aa25.92■■□□□ 1.74
PDGFA-206ENST00000482462 ABCC11Q96J66 1382 aa25.92■■□□□ 1.74
PDGFA-206ENST00000482462 STK26Q9P289 416 aa25.91■■□□□ 1.74
PDGFA-206ENST00000482462 TECPR2O15040 1411 aa25.9■■□□□ 1.74
PDGFA-206ENST00000482462 DISP3Q9P2K9 1392 aa25.89■■□□□ 1.74
PDGFA-206ENST00000482462 CPS1P31327 1500 aa25.89■■□□□ 1.74
PDGFA-206ENST00000482462 SLC26A8Q96RN1 970 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms