RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 ATP10BO94823 1461 aa9.7□□□□□ -0.86
NCK1-208ENST00000482071 SUPT6HQ7KZ85 1726 aaKnown RBP9.7□□□□□ -0.86
NCK1-208ENST00000482071 HRO43593 1189 aa9.69□□□□□ -0.86
NCK1-208ENST00000482071 CDK13Q14004 1512 aaKnown RBP9.69□□□□□ -0.86
NCK1-208ENST00000482071 UPF1Q92900 1129 aaKnown RBP eCLIP9.69□□□□□ -0.86
NCK1-208ENST00000482071 UACAQ9BZF9 1416 aa9.69□□□□□ -0.86
NCK1-208ENST00000482071 ABCC2Q92887 1545 aa9.68□□□□□ -0.86
NCK1-208ENST00000482071 PDE4AP27815 886 aa9.68□□□□□ -0.86
NCK1-208ENST00000482071 PHLDB1Q86UU1 1377 aa9.67□□□□□ -0.86
NCK1-208ENST00000482071 KDM5BQ9UGL1 1544 aa9.66□□□□□ -0.86
NCK1-208ENST00000482071 NCOA2Q15596 1464 aa9.66□□□□□ -0.86
NCK1-208ENST00000482071 TROQ12816 1431 aaPredicted RBP9.65□□□□□ -0.86
NCK1-208ENST00000482071 MTUS2Q5JR59 1369 aa9.65□□□□□ -0.86
NCK1-208ENST00000482071 MFSD10Q14728 455 aa9.64□□□□□ -0.87
NCK1-208ENST00000482071 KCNK17Q96T54 332 aa9.64□□□□□ -0.87
NCK1-208ENST00000482071 ANO8Q9HCE9 1232 aaPredicted RBP9.64□□□□□ -0.87
NCK1-208ENST00000482071 CCNB3Q8WWL7 1395 aa9.63□□□□□ -0.87
NCK1-208ENST00000482071 FOSBP53539 338 aa9.63□□□□□ -0.87
NCK1-208ENST00000482071 ZNF454Q8N9F8 522 aa9.63□□□□□ -0.87
NCK1-208ENST00000482071 BCL2L12Q9HB09 334 aa9.63□□□□□ -0.87
NCK1-208ENST00000482071 HCSTQ9UBK5 93 aa9.63□□□□□ -0.87
NCK1-208ENST00000482071 TCOF1Q13428 1488 aaKnown RBP9.63□□□□□ -0.87
NCK1-208ENST00000482071 MYOM3Q5VTT5 1437 aa9.63□□□□□ -0.87
NCK1-208ENST00000482071 MIA2Q96PC5 1412 aa9.63□□□□□ -0.87
NCK1-208ENST00000482071 ABCC10Q5T3U5 1492 aa9.62□□□□□ -0.87
NCK1-208ENST00000482071 DDX27Q96GQ7 796 aaKnown RBP9.62□□□□□ -0.87
NCK1-208ENST00000482071 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
NCK1-208ENST00000482071 ATP1B4Q9UN42 357 aaPredicted RBP9.62□□□□□ -0.87
NCK1-208ENST00000482071 CDK11AQ9UQ88 783 aaPredicted RBP9.62□□□□□ -0.87
NCK1-208ENST00000482071 FGD6Q6ZV73 1430 aa9.62□□□□□ -0.87
NCK1-208ENST00000482071 ZCCHC11Q5TAX3 1644 aaKnown RBP9.61□□□□□ -0.87
NCK1-208ENST00000482071 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
NCK1-208ENST00000482071 SLC4A5Q9BY07 1137 aa9.6□□□□□ -0.87
NCK1-208ENST00000482071 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
NCK1-208ENST00000482071 KIF14Q15058 1648 aa9.6□□□□□ -0.87
NCK1-208ENST00000482071 CDC42BPAQ5VT25 1732 aa9.59□□□□□ -0.87
NCK1-208ENST00000482071 ITSN2Q9NZM3 1697 aa9.59□□□□□ -0.87
NCK1-208ENST00000482071 PTPN23Q9H3S7 1636 aa9.59□□□□□ -0.87
NCK1-208ENST00000482071 GPATCH8Q9UKJ3 1502 aaKnown RBP9.58□□□□□ -0.88
NCK1-208ENST00000482071 PLEKHD1A6NEE1 506 aa9.58□□□□□ -0.88
NCK1-208ENST00000482071 EVI5O60447 810 aa9.58□□□□□ -0.88
NCK1-208ENST00000482071 TTBK1Q5TCY1 1321 aaPredicted RBP9.57□□□□□ -0.88
NCK1-208ENST00000482071 EMILIN3Q9NT22 766 aa9.57□□□□□ -0.88
NCK1-208ENST00000482071 CADPS2Q86UW7 1296 aa9.56□□□□□ -0.88
NCK1-208ENST00000482071 CDC42BPBQ9Y5S2 1711 aa9.56□□□□□ -0.88
NCK1-208ENST00000482071 HRCP23327 699 aa9.55□□□□□ -0.88
NCK1-208ENST00000482071 PTPREP23469 700 aa9.55□□□□□ -0.88
NCK1-208ENST00000482071 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
NCK1-208ENST00000482071 RIMBP3CA6NJZ7 1639 aa9.55□□□□□ -0.88
NCK1-208ENST00000482071 RIMBP3BA6NNM3 1639 aa9.55□□□□□ -0.88
NCK1-208ENST00000482071 RIMBP3Q9UFD9 1639 aa9.55□□□□□ -0.88
NCK1-208ENST00000482071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.55□□□□□ -0.88
NCK1-208ENST00000482071 PREX2Q70Z35 1606 aa9.54□□□□□ -0.88
NCK1-208ENST00000482071 BHMG1C9JSJ3 638 aaPredicted RBP9.54□□□□□ -0.88
NCK1-208ENST00000482071 ZDHHC16Q969W1 377 aa9.54□□□□□ -0.88
NCK1-208ENST00000482071 KCTD12Q96CX2 325 aaKnown RBP9.54□□□□□ -0.88
NCK1-208ENST00000482071 ZBED2Q9BTP6 218 aa9.54□□□□□ -0.88
NCK1-208ENST00000482071 ARAP3Q8WWN8 1544 aa9.54□□□□□ -0.88
NCK1-208ENST00000482071 ADAM33Q9BZ11 813 aa9.53□□□□□ -0.88
NCK1-208ENST00000482071 PTPRKQ15262 1439 aa9.53□□□□□ -0.88
NCK1-208ENST00000482071 DNMT1P26358 1616 aaKnown RBP9.53□□□□□ -0.88
NCK1-208ENST00000482071 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
NCK1-208ENST00000482071 AKNAQ7Z591 1439 aa9.52□□□□□ -0.89
NCK1-208ENST00000482071 ABCA9Q8IUA7 1624 aa9.52□□□□□ -0.89
NCK1-208ENST00000482071 MYO5CQ9NQX4 1742 aa9.51□□□□□ -0.89
NCK1-208ENST00000482071 TTC37Q6PGP7 1564 aa9.51□□□□□ -0.89
NCK1-208ENST00000482071 ARID3CA6NKF2 412 aa9.51□□□□□ -0.89
NCK1-208ENST00000482071 STAC3Q96MF2 364 aa9.51□□□□□ -0.89
NCK1-208ENST00000482071 WDR7Q9Y4E6 1490 aa9.51□□□□□ -0.89
NCK1-208ENST00000482071 MAPKBP1O60336 1514 aa9.5□□□□□ -0.89
NCK1-208ENST00000482071 ARHGEF5Q12774 1597 aa9.5□□□□□ -0.89
NCK1-208ENST00000482071 PLCH2O75038 1416 aa9.49□□□□□ -0.89
NCK1-208ENST00000482071 CROCC2H7BZ55 1655 aa9.49□□□□□ -0.89
NCK1-208ENST00000482071 CAMK2BQ13554 666 aa9.49□□□□□ -0.89
NCK1-208ENST00000482071 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
NCK1-208ENST00000482071 ROCK1Q13464 1354 aa9.49□□□□□ -0.89
NCK1-208ENST00000482071 HFM1A2PYH4 1435 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 ABCC5O15440 1437 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 CAMSAP2Q08AD1 1489 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 MBD5Q9P267 1494 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 SAMD9LQ8IVG5 1584 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 GCC2Q8IWJ2 1684 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 DAPK1P53355 1430 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 ASXL2Q76L83 1435 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 SETD5Q9C0A6 1442 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 KIAA1107Q9UPP5 1409 aa9.48□□□□□ -0.89
NCK1-208ENST00000482071 ADGRL2O95490 1459 aa9.47□□□□□ -0.89
NCK1-208ENST00000482071 NAIPQ13075 1403 aa9.47□□□□□ -0.89
NCK1-208ENST00000482071 FAM50AQ14320 339 aaKnown RBP9.46□□□□□ -0.9
NCK1-208ENST00000482071 CFDP1Q9UEE9 299 aaPredicted RBP9.46□□□□□ -0.9
NCK1-208ENST00000482071 ZNF644Q9H582 1327 aaPredicted RBP9.46□□□□□ -0.9
NCK1-208ENST00000482071 SHANK2Q9UPX8 1470 aa9.46□□□□□ -0.9
NCK1-208ENST00000482071 GLI2P10070 1586 aa9.46□□□□□ -0.9
NCK1-208ENST00000482071 MAST1Q9Y2H9 1570 aa9.46□□□□□ -0.9
NCK1-208ENST00000482071 ADGBQ8N7X0 1667 aa9.45□□□□□ -0.9
NCK1-208ENST00000482071 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
NCK1-208ENST00000482071 PHF14O94880 888 aa9.45□□□□□ -0.9
NCK1-208ENST00000482071 RSPH4AQ5TD94 716 aa9.45□□□□□ -0.9
NCK1-208ENST00000482071 THSD4Q6ZMP0 1018 aa9.45□□□□□ -0.9
NCK1-208ENST00000482071 CLSPNQ9HAW4 1339 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms