RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 IDI1Q13907 227 aa21.83■■□□□ 1.09
RXRA-202ENST00000481739 ADGRB3O60242 1522 aa21.82■■□□□ 1.08
RXRA-202ENST00000481739 FER1L4A9Z1Z3 1794 aa21.82■■□□□ 1.08
RXRA-202ENST00000481739 GTF3C3Q9Y5Q9 886 aa21.8■■□□□ 1.08
RXRA-202ENST00000481739 SPATA31D1Q6ZQQ2 1576 aa21.8■■□□□ 1.08
RXRA-202ENST00000481739 PLPPR3Q6T4P5 718 aa21.78■■□□□ 1.08
RXRA-202ENST00000481739 STAG3Q9UJ98 1225 aa21.78■■□□□ 1.08
RXRA-202ENST00000481739 CEBPAP49715 358 aaPredicted RBP21.76■■□□□ 1.07
RXRA-202ENST00000481739 IFT172Q9UG01 1749 aa21.75■■□□□ 1.07
RXRA-202ENST00000481739 MYO5BQ9ULV0 1848 aa21.74■■□□□ 1.07
RXRA-202ENST00000481739 RPGRIP1LQ68CZ1 1315 aa21.74■■□□□ 1.07
RXRA-202ENST00000481739 MADDQ8WXG6 1647 aa21.74■■□□□ 1.07
RXRA-202ENST00000481739 TNRQ92752 1358 aa21.73■■□□□ 1.07
RXRA-202ENST00000481739 PPLO60437 1756 aa21.72■■□□□ 1.07
RXRA-202ENST00000481739 C3P01024 1663 aa21.72■■□□□ 1.07
RXRA-202ENST00000481739 TMEM131LA2VDJ0 1609 aa21.72■■□□□ 1.07
RXRA-202ENST00000481739 ST20-MTHFSA0A0A6YYL1 179 aa21.72■■□□□ 1.07
RXRA-202ENST00000481739 MYOM2P54296 1465 aa21.72■■□□□ 1.07
RXRA-202ENST00000481739 ADGRF5Q8IZF2 1346 aa21.71■■□□□ 1.07
RXRA-202ENST00000481739 NBPF1Q3BBV0 1214 aa21.71■■□□□ 1.07
RXRA-202ENST00000481739 PRKRIP1Q9H875 184 aaPredicted RBP21.71■■□□□ 1.07
RXRA-202ENST00000481739 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
RXRA-202ENST00000481739 RIMS1Q86UR5 1692 aaKnown RBP21.7■■□□□ 1.06
RXRA-202ENST00000481739 VGFO15240 615 aaPredicted RBP21.67■■□□□ 1.06
RXRA-202ENST00000481739 NEXMIFQ5QGS0 1516 aa21.67■■□□□ 1.06
RXRA-202ENST00000481739 KIAA1210Q9ULL0 1709 aa21.66■■□□□ 1.06
RXRA-202ENST00000481739 ADAMTSL3P82987 1691 aa21.65■■□□□ 1.06
RXRA-202ENST00000481739 A2ML1A8K2U0 1454 aa21.64■■□□□ 1.05
RXRA-202ENST00000481739 KTN1Q86UP2 1357 aaKnown RBP21.64■■□□□ 1.05
RXRA-202ENST00000481739 CFAP70Q5T0N1 1121 aa21.64■■□□□ 1.05
RXRA-202ENST00000481739 NRXN1Q9ULB1 1477 aa21.63■■□□□ 1.05
RXRA-202ENST00000481739 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
RXRA-202ENST00000481739 NLRP1Q9C000 1473 aa21.6■■□□□ 1.05
RXRA-202ENST00000481739 PIK3C2GO75747 1445 aa21.6■■□□□ 1.05
RXRA-202ENST00000481739 SCAF11Q99590 1463 aaKnown RBP21.6■■□□□ 1.05
RXRA-202ENST00000481739 IQGAP1P46940 1657 aa21.59■■□□□ 1.05
RXRA-202ENST00000481739 EIF3AQ14152 1382 aaKnown RBP21.59■■□□□ 1.05
RXRA-202ENST00000481739 RIMS2Q9UQ26 1411 aa21.58■■□□□ 1.05
RXRA-202ENST00000481739 SLC24A1O60721 1099 aa21.58■■□□□ 1.05
RXRA-202ENST00000481739 TESK2Q96S53 571 aa21.58■■□□□ 1.05
RXRA-202ENST00000481739 ZFYVE9O95405 1425 aa21.58■■□□□ 1.04
RXRA-202ENST00000481739 UBR1Q8IWV7 1749 aa21.57■■□□□ 1.04
RXRA-202ENST00000481739 TMF1P82094 1093 aa21.57■■□□□ 1.04
RXRA-202ENST00000481739 POLR3GLQ9BT43 218 aa21.57■■□□□ 1.04
RXRA-202ENST00000481739 C14orf93Q9H972 538 aaKnown RBP21.57■■□□□ 1.04
RXRA-202ENST00000481739 KDM5AP29375 1690 aaKnown RBP21.56■■□□□ 1.04
RXRA-202ENST00000481739 HDGFP51858 240 aaKnown RBP21.55■■□□□ 1.04
RXRA-202ENST00000481739 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.55■■□□□ 1.04
RXRA-202ENST00000481739 CDCA8Q53HL2 280 aa21.53■■□□□ 1.04
RXRA-202ENST00000481739 MYO3AQ8NEV4 1616 aa21.53■■□□□ 1.04
RXRA-202ENST00000481739 MRS2Q9HD23 443 aa21.52■■□□□ 1.04
RXRA-202ENST00000481739 TMEM132EQ6IEE7 984 aa21.51■■□□□ 1.03
RXRA-202ENST00000481739 RALBP1Q15311 655 aa21.5■■□□□ 1.03
RXRA-202ENST00000481739 SETBP1Q9Y6X0 1596 aa21.5■■□□□ 1.03
RXRA-202ENST00000481739 TMEM2Q9UHN6 1383 aa21.5■■□□□ 1.03
RXRA-202ENST00000481739 DISP3Q9P2K9 1392 aa21.49■■□□□ 1.03
RXRA-202ENST00000481739 BCANQ96GW7 911 aa21.48■■□□□ 1.03
RXRA-202ENST00000481739 THEMISQ8N1K5 641 aaPredicted RBP21.48■■□□□ 1.03
RXRA-202ENST00000481739 PTPRMP28827 1452 aa21.47■■□□□ 1.03
RXRA-202ENST00000481739 TRAK1Q9UPV9 953 aa21.46■■□□□ 1.03
RXRA-202ENST00000481739 ADGRB1O14514 1584 aa21.46■■□□□ 1.03
RXRA-202ENST00000481739 HNRNPUQ00839 825 aaKnown RBP eCLIP21.45■■□□□ 1.03
RXRA-202ENST00000481739 EID1Q9Y6B2 187 aa21.45■■□□□ 1.03
RXRA-202ENST00000481739 SETD1BQ9UPS6 1966 aaKnown RBP21.45■■□□□ 1.03
RXRA-202ENST00000481739 CEP170BQ9Y4F5 1589 aaPredicted RBP21.45■■□□□ 1.02
RXRA-202ENST00000481739 ALKQ9UM73 1620 aa21.45■■□□□ 1.02
RXRA-202ENST00000481739 TXNDC2Q86VQ3 553 aa21.44■■□□□ 1.02
RXRA-202ENST00000481739 MYBBP1AQ9BQG0 1328 aaKnown RBP21.43■■□□□ 1.02
RXRA-202ENST00000481739 SBNO2Q9Y2G9 1366 aa21.43■■□□□ 1.02
RXRA-202ENST00000481739 CCDC184Q52MB2 194 aa21.43■■□□□ 1.02
RXRA-202ENST00000481739 BRD4O60885 1362 aaPredicted RBP21.42■■□□□ 1.02
RXRA-202ENST00000481739 STK26Q9P289 416 aa21.42■■□□□ 1.02
RXRA-202ENST00000481739 LTKP29376 864 aa21.41■■□□□ 1.02
RXRA-202ENST00000481739 PARD3Q8TEW0 1356 aa21.41■■□□□ 1.02
RXRA-202ENST00000481739 PER1O15534 1290 aaPredicted RBP21.41■■□□□ 1.02
RXRA-202ENST00000481739 SLIT1O75093 1534 aa21.4■■□□□ 1.02
RXRA-202ENST00000481739 ARHGAP23Q9P227 1491 aa21.39■■□□□ 1.01
RXRA-202ENST00000481739 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.01
RXRA-202ENST00000481739 ZNF142P52746 1687 aaPredicted RBP21.38■■□□□ 1.01
RXRA-202ENST00000481739 ZBED9Q6R2W3 1325 aa21.38■■□□□ 1.01
RXRA-202ENST00000481739 CENPJQ9HC77 1338 aaPredicted RBP21.38■■□□□ 1.01
RXRA-202ENST00000481739 NRXN3Q9Y4C0 1643 aa21.38■■□□□ 1.01
RXRA-202ENST00000481739 FAM9BQ8IZU0 186 aa21.37■■□□□ 1.01
RXRA-202ENST00000481739 PLEKHG1Q9ULL1 1385 aa21.37■■□□□ 1.01
RXRA-202ENST00000481739 YTHDC2Q9H6S0 1430 aaKnown RBP21.36■■□□□ 1.01
RXRA-202ENST00000481739 TMC1Q8TDI8 760 aa21.36■■□□□ 1.01
RXRA-202ENST00000481739 NLRP13Q86W25 1043 aa21.35■■□□□ 1.01
RXRA-202ENST00000481739 SETD1AO15047 1707 aaKnown RBP21.35■■□□□ 1.01
RXRA-202ENST00000481739 ARHGEF28Q8N1W1 1705 aaKnown RBP21.34■■□□□ 1.01
RXRA-202ENST00000481739 PANK3Q9H999 370 aa21.34■■□□□ 1.01
RXRA-202ENST00000481739 QRICH2Q9H0J4 1663 aa21.33■■□□□ 1.01
RXRA-202ENST00000481739 KDM4FA0A1W2PPD8 638 aa21.32■■□□□ 1
RXRA-202ENST00000481739 SAFB2Q14151 953 aaKnown RBP eCLIP21.32■■□□□ 1
RXRA-202ENST00000481739 ANKLE2Q86XL3 938 aa21.32■■□□□ 1
RXRA-202ENST00000481739 POGKQ9P215 609 aa21.32■■□□□ 1
RXRA-202ENST00000481739 SUPT16HQ9Y5B9 1047 aaKnown RBP21.32■■□□□ 1
RXRA-202ENST00000481739 METP08581 1390 aa21.31■■□□□ 1
RXRA-202ENST00000481739 PNISRQ8TF01 805 aaKnown RBP21.31■■□□□ 1
RXRA-202ENST00000481739 SLC26A8Q96RN1 970 aa21.31■■□□□ 1
RXRA-202ENST00000481739 NPC1L1Q9UHC9 1359 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms