RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 CD109Q6YHK3 1445 aa9.25□□□□□ -0.93
LINC02040-201ENST00000481004 FAM205CA6NFA0 338 aa9.25□□□□□ -0.93
LINC02040-201ENST00000481004 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
LINC02040-201ENST00000481004 TEX14Q8IWB6 1497 aa9.25□□□□□ -0.93
LINC02040-201ENST00000481004 CDK13Q14004 1512 aaKnown RBP9.24□□□□□ -0.93
LINC02040-201ENST00000481004 FRMPD1Q5SYB0 1578 aa9.24□□□□□ -0.93
LINC02040-201ENST00000481004 VSIG10Q8N0Z9 540 aa9.23□□□□□ -0.93
LINC02040-201ENST00000481004 TTC37Q6PGP7 1564 aa9.23□□□□□ -0.93
LINC02040-201ENST00000481004 PSDA5PKW4 1024 aaPredicted RBP9.22□□□□□ -0.93
LINC02040-201ENST00000481004 DPYSL4O14531 572 aa9.22□□□□□ -0.93
LINC02040-201ENST00000481004 EVI5O60447 810 aa9.22□□□□□ -0.93
LINC02040-201ENST00000481004 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
LINC02040-201ENST00000481004 SPNS2Q8IVW8 549 aa9.22□□□□□ -0.93
LINC02040-201ENST00000481004 HS3ST6Q96QI5 342 aa9.22□□□□□ -0.93
LINC02040-201ENST00000481004 LHX6Q9UPM6 363 aa9.21□□□□□ -0.94
LINC02040-201ENST00000481004 ADGRL1O94910 1474 aa9.21□□□□□ -0.94
LINC02040-201ENST00000481004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC02040-201ENST00000481004 ARAP3Q8WWN8 1544 aa9.21□□□□□ -0.94
LINC02040-201ENST00000481004 SPDYE16A6NNV3 312 aaPredicted RBP9.18□□□□□ -0.94
LINC02040-201ENST00000481004 PCF11O94913 1555 aaKnown RBP9.18□□□□□ -0.94
LINC02040-201ENST00000481004 UBTFP17480 764 aaKnown RBP9.18□□□□□ -0.94
LINC02040-201ENST00000481004 KIF14Q15058 1648 aa9.18□□□□□ -0.94
LINC02040-201ENST00000481004 RICTORQ6R327 1708 aa9.18□□□□□ -0.94
LINC02040-201ENST00000481004 HECW1Q76N89 1606 aa9.18□□□□□ -0.94
LINC02040-201ENST00000481004 ARIH1Q9Y4X5 557 aaPredicted RBP9.18□□□□□ -0.94
LINC02040-201ENST00000481004 SIGLEC1Q9BZZ2 1709 aa9.17□□□□□ -0.94
LINC02040-201ENST00000481004 PPP4R3BQ5MIZ7 849 aa9.17□□□□□ -0.94
LINC02040-201ENST00000481004 ANO8Q9HCE9 1232 aaPredicted RBP9.17□□□□□ -0.94
LINC02040-201ENST00000481004 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
LINC02040-201ENST00000481004 ARHGEF1Q92888 912 aaKnown RBP9.16□□□□□ -0.94
LINC02040-201ENST00000481004 NEO1Q92859 1461 aa9.15□□□□□ -0.94
LINC02040-201ENST00000481004 PDIA6Q15084 440 aa9.15□□□□□ -0.94
LINC02040-201ENST00000481004 KDM2AQ9Y2K7 1162 aa9.15□□□□□ -0.94
LINC02040-201ENST00000481004 FMN1Q68DA7 1419 aa9.14□□□□□ -0.95
LINC02040-201ENST00000481004 RAPGEF3O95398 923 aa9.14□□□□□ -0.95
LINC02040-201ENST00000481004 ZNF687Q8N1G0 1237 aa9.14□□□□□ -0.95
LINC02040-201ENST00000481004 ZNF454Q8N9F8 522 aa9.14□□□□□ -0.95
LINC02040-201ENST00000481004 POTEB3A0JP26 581 aa9.13□□□□□ -0.95
LINC02040-201ENST00000481004 POTEBQ6S5H4 581 aa9.13□□□□□ -0.95
LINC02040-201ENST00000481004 MYO5CQ9NQX4 1742 aa9.13□□□□□ -0.95
LINC02040-201ENST00000481004 FANCAO15360 1455 aa9.12□□□□□ -0.95
LINC02040-201ENST00000481004 CFAP74Q9C0B2 1584 aa9.12□□□□□ -0.95
LINC02040-201ENST00000481004 CDC42BPBQ9Y5S2 1711 aa9.11□□□□□ -0.95
LINC02040-201ENST00000481004 ARHGEF40Q8TER5 1519 aa9.11□□□□□ -0.95
LINC02040-201ENST00000481004 ADAMTSL3P82987 1691 aa9.11□□□□□ -0.95
LINC02040-201ENST00000481004 PLEKHD1A6NEE1 506 aa9.11□□□□□ -0.95
LINC02040-201ENST00000481004 PBX2P40425 430 aa9.11□□□□□ -0.95
LINC02040-201ENST00000481004 FOSBP53539 338 aa9.11□□□□□ -0.95
LINC02040-201ENST00000481004 AKNAQ7Z591 1439 aa9.11□□□□□ -0.95
LINC02040-201ENST00000481004 CASKIN1Q8WXD9 1431 aa9.11□□□□□ -0.95
LINC02040-201ENST00000481004 ZMYM4Q5VZL5 1548 aa9.1□□□□□ -0.95
LINC02040-201ENST00000481004 PTGER2P43116 358 aa9.1□□□□□ -0.95
LINC02040-201ENST00000481004 PLCH2O75038 1416 aa9.1□□□□□ -0.95
LINC02040-201ENST00000481004 PHLDB1Q86UU1 1377 aa9.1□□□□□ -0.95
LINC02040-201ENST00000481004 BCORL1Q5H9F3 1711 aa9.09□□□□□ -0.95
LINC02040-201ENST00000481004 TROQ12816 1431 aaPredicted RBP9.09□□□□□ -0.95
LINC02040-201ENST00000481004 PHF14O94880 888 aa9.09□□□□□ -0.95
LINC02040-201ENST00000481004 EPAS1Q99814 870 aa9.09□□□□□ -0.95
LINC02040-201ENST00000481004 DENND4BO75064 1496 aaPredicted RBP9.08□□□□□ -0.96
LINC02040-201ENST00000481004 CDC42BPAQ5VT25 1732 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 CLIP1P30622 1438 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 YEATS2Q9ULM3 1422 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 TYW1BQ6NUM6 668 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 DDX12PQ92771 950 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 FBXW7Q969H0 707 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 ZDHHC16Q969W1 377 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 ATP1B4Q9UN42 357 aaPredicted RBP9.08□□□□□ -0.96
LINC02040-201ENST00000481004 PREX2Q70Z35 1606 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 MADDQ8WXG6 1647 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 FYCO1Q9BQS8 1478 aa9.08□□□□□ -0.96
LINC02040-201ENST00000481004 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
LINC02040-201ENST00000481004 POGZQ7Z3K3 1410 aa9.06□□□□□ -0.96
LINC02040-201ENST00000481004 BCL2L12Q9HB09 334 aa9.06□□□□□ -0.96
LINC02040-201ENST00000481004 PCDHGA10Q9Y5H3 936 aa9.06□□□□□ -0.96
LINC02040-201ENST00000481004 CCDC18Q5T9S5 1454 aa9.06□□□□□ -0.96
LINC02040-201ENST00000481004 ZFYVE16Q7Z3T8 1539 aa9.05□□□□□ -0.96
LINC02040-201ENST00000481004 ARHGEF12Q9NZN5 1544 aa9.05□□□□□ -0.96
LINC02040-201ENST00000481004 KDM5CP41229 1560 aa9.05□□□□□ -0.96
LINC02040-201ENST00000481004 ARHGAP33O14559 1287 aa9.05□□□□□ -0.96
LINC02040-201ENST00000481004 SLC24A1O60721 1099 aa9.05□□□□□ -0.96
LINC02040-201ENST00000481004 NBR1Q14596 966 aa9.05□□□□□ -0.96
LINC02040-201ENST00000481004 SCAPERQ9BY12 1400 aa9.05□□□□□ -0.96
LINC02040-201ENST00000481004 RIMS1Q86UR5 1692 aaKnown RBP9.04□□□□□ -0.96
LINC02040-201ENST00000481004 ITSN2Q9NZM3 1697 aa9.04□□□□□ -0.96
LINC02040-201ENST00000481004 GRXCR2A6NFK2 248 aa9.04□□□□□ -0.96
LINC02040-201ENST00000481004 PTPREP23469 700 aa9.04□□□□□ -0.96
LINC02040-201ENST00000481004 ABCC1P33527 1531 aa9.04□□□□□ -0.96
LINC02040-201ENST00000481004 ARHGAP5Q13017 1502 aa9.04□□□□□ -0.96
LINC02040-201ENST00000481004 PTPRMP28827 1452 aa9.03□□□□□ -0.96
LINC02040-201ENST00000481004 ABCA6Q8N139 1617 aa9.03□□□□□ -0.96
LINC02040-201ENST00000481004 KCNK17Q96T54 332 aa9.03□□□□□ -0.96
LINC02040-201ENST00000481004 KRTAP3-3Q9BYR6 98 aa9.03□□□□□ -0.96
LINC02040-201ENST00000481004 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
LINC02040-201ENST00000481004 CEP162Q5TB80 1403 aa9.03□□□□□ -0.96
LINC02040-201ENST00000481004 SAMD9LQ8IVG5 1584 aa9.03□□□□□ -0.96
LINC02040-201ENST00000481004 ADAM33Q9BZ11 813 aa9.02□□□□□ -0.97
LINC02040-201ENST00000481004 AXIN2Q9Y2T1 843 aa9.02□□□□□ -0.97
LINC02040-201ENST00000481004 DIP2CQ9Y2E4 1556 aa9.02□□□□□ -0.97
LINC02040-201ENST00000481004 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.97
LINC02040-201ENST00000481004 TRAPPC8Q9Y2L5 1435 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms