RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
RGPD6-209ENST00000480894 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
RGPD6-209ENST00000480894 TLL1O43897 1013 aa12.25□□□□□ -0.45
RGPD6-209ENST00000480894 DNAJB2P25686 324 aa12.24□□□□□ -0.45
RGPD6-209ENST00000480894 SPRYD7Q5W111 196 aa12.24□□□□□ -0.45
RGPD6-209ENST00000480894 ANKLE1Q8NAG6 615 aa12.23□□□□□ -0.45
RGPD6-209ENST00000480894 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
RGPD6-209ENST00000480894 ZNF598Q86UK7 904 aaKnown RBP12.22□□□□□ -0.45
RGPD6-209ENST00000480894 ACTN4O43707 911 aaKnown RBP12.21□□□□□ -0.45
RGPD6-209ENST00000480894 DGAT1O75907 488 aa12.21□□□□□ -0.45
RGPD6-209ENST00000480894 MLLT3P42568 568 aaPredicted RBP12.21□□□□□ -0.45
RGPD6-209ENST00000480894 PRR20EP86478 221 aa12.21□□□□□ -0.45
RGPD6-209ENST00000480894 PRR20CP86479 221 aa12.21□□□□□ -0.45
RGPD6-209ENST00000480894 PRR20DP86480 221 aa12.21□□□□□ -0.45
RGPD6-209ENST00000480894 PRR20BP86481 221 aa12.21□□□□□ -0.45
RGPD6-209ENST00000480894 PRR20AP86496 221 aa12.21□□□□□ -0.45
RGPD6-209ENST00000480894 MYT1Q01538 1121 aa12.21□□□□□ -0.45
RGPD6-209ENST00000480894 TMEM134Q9H6X4 195 aa12.21□□□□□ -0.45
RGPD6-209ENST00000480894 PTGDRQ13258 359 aa12.2□□□□□ -0.46
RGPD6-209ENST00000480894 PPEF1O14829 653 aaPredicted RBP12.19□□□□□ -0.46
RGPD6-209ENST00000480894 S1PR4O95977 384 aa12.19□□□□□ -0.46
RGPD6-209ENST00000480894 KMT5BQ4FZB7 885 aa12.19□□□□□ -0.46
RGPD6-209ENST00000480894 RBM46Q8TBY0 533 aaKnown RBP12.19□□□□□ -0.46
RGPD6-209ENST00000480894 LIAT1Q6ZQX7 453 aa12.18□□□□□ -0.46
RGPD6-209ENST00000480894 ADGRG1Q9Y653 693 aa12.18□□□□□ -0.46
RGPD6-209ENST00000480894 CFHP08603 1231 aa12.16□□□□□ -0.46
RGPD6-209ENST00000480894 ZNF697Q5TEC3 545 aa12.16□□□□□ -0.46
RGPD6-209ENST00000480894 RCCD1A6NED2 376 aa12.15□□□□□ -0.46
RGPD6-209ENST00000480894 GDF9O60383 454 aa12.14□□□□□ -0.47
RGPD6-209ENST00000480894 ADH1BP00325 375 aa12.14□□□□□ -0.47
RGPD6-209ENST00000480894 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
RGPD6-209ENST00000480894 POTECB2RU33 542 aa12.13□□□□□ -0.47
RGPD6-209ENST00000480894 FAM187AA6NFU0 413 aa12.12□□□□□ -0.47
RGPD6-209ENST00000480894 TNFRSF10AO00220 468 aa12.11□□□□□ -0.47
RGPD6-209ENST00000480894 SLC10A3P09131 477 aa12.11□□□□□ -0.47
RGPD6-209ENST00000480894 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
RGPD6-209ENST00000480894 NR1I2O75469 434 aa12.1□□□□□ -0.47
RGPD6-209ENST00000480894 PLA2G2CQ5R387 149 aa12.09□□□□□ -0.47
RGPD6-209ENST00000480894 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
RGPD6-209ENST00000480894 SLC6A16Q9GZN6 736 aa12.08□□□□□ -0.48
RGPD6-209ENST00000480894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.06□□□□□ -0.48
RGPD6-209ENST00000480894 NUTM2FA1L443 756 aa12.06□□□□□ -0.48
RGPD6-209ENST00000480894 AAASQ9NRG9 546 aa12.04□□□□□ -0.48
RGPD6-209ENST00000480894 ST8SIA5O15466 376 aa12.03□□□□□ -0.48
RGPD6-209ENST00000480894 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
RGPD6-209ENST00000480894 FCHSD2O94868 740 aa12.01□□□□□ -0.49
RGPD6-209ENST00000480894 PXYLP1Q8TE99 480 aa12.01□□□□□ -0.49
RGPD6-209ENST00000480894 PKD2L1Q9P0L9 805 aa12.01□□□□□ -0.49
RGPD6-209ENST00000480894 PUS10Q3MIT2 529 aaKnown RBP12□□□□□ -0.49
RGPD6-209ENST00000480894 LMOD2Q6P5Q4 547 aa12□□□□□ -0.49
RGPD6-209ENST00000480894 SPSB2Q99619 263 aa11.99□□□□□ -0.49
RGPD6-209ENST00000480894 OATP04181 439 aa11.98□□□□□ -0.49
RGPD6-209ENST00000480894 LCE2AQ5TA79 106 aaPredicted RBP11.98□□□□□ -0.49
RGPD6-209ENST00000480894 TREML4Q6UXN2 200 aa11.98□□□□□ -0.49
RGPD6-209ENST00000480894 FOXC1Q12948 553 aa11.97□□□□□ -0.49
RGPD6-209ENST00000480894 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
RGPD6-209ENST00000480894 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
RGPD6-209ENST00000480894 RPIAP49247 311 aa11.95□□□□□ -0.5
RGPD6-209ENST00000480894 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
RGPD6-209ENST00000480894 CRIPAKQ8N1N5 446 aa11.95□□□□□ -0.5
RGPD6-209ENST00000480894 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
RGPD6-209ENST00000480894 TOR4AQ9NXH8 423 aa11.92□□□□□ -0.5
RGPD6-209ENST00000480894 AVPP01185 164 aa11.91□□□□□ -0.5
RGPD6-209ENST00000480894 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
RGPD6-209ENST00000480894 FCF1Q9Y324 198 aaKnown RBP11.91□□□□□ -0.5
RGPD6-209ENST00000480894 HIC1Q14526 733 aa11.9□□□□□ -0.5
RGPD6-209ENST00000480894 MORN1Q5T089 497 aa11.9□□□□□ -0.5
RGPD6-209ENST00000480894 THAP11Q96EK4 314 aa11.9□□□□□ -0.5
RGPD6-209ENST00000480894 SEMA3EO15041 775 aa11.89□□□□□ -0.51
RGPD6-209ENST00000480894 CD2BP2O95400 341 aaKnown RBP11.88□□□□□ -0.51
RGPD6-209ENST00000480894 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
RGPD6-209ENST00000480894 AXIN1O15169 862 aa11.86□□□□□ -0.51
RGPD6-209ENST00000480894 FUT2Q10981 343 aa11.86□□□□□ -0.51
RGPD6-209ENST00000480894 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
RGPD6-209ENST00000480894 FAM160A2Q8N612 972 aaPredicted RBP11.86□□□□□ -0.51
RGPD6-209ENST00000480894 RDH13Q8NBN7 331 aa11.86□□□□□ -0.51
RGPD6-209ENST00000480894 GMPR2Q9P2T1 348 aaKnown RBP11.86□□□□□ -0.51
RGPD6-209ENST00000480894 CTC1Q2NKJ3 1217 aa11.85□□□□□ -0.51
RGPD6-209ENST00000480894 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
RGPD6-209ENST00000480894 FMNL1O95466 1100 aaPredicted RBP11.84□□□□□ -0.51
RGPD6-209ENST00000480894 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
RGPD6-209ENST00000480894 SMCPP49901 116 aaPredicted RBP11.83□□□□□ -0.52
RGPD6-209ENST00000480894 SLC27A5Q9Y2P5 690 aa11.83□□□□□ -0.52
RGPD6-209ENST00000480894 DDX11L8A8MPP1 907 aa11.82□□□□□ -0.52
RGPD6-209ENST00000480894 C11orf95C9JLR9 678 aaPredicted RBP11.82□□□□□ -0.52
RGPD6-209ENST00000480894 PRDM9Q9NQV7 894 aa11.82□□□□□ -0.52
RGPD6-209ENST00000480894 WFS1O76024 890 aa11.81□□□□□ -0.52
RGPD6-209ENST00000480894 FECHP22830 423 aa11.81□□□□□ -0.52
RGPD6-209ENST00000480894 SALL2Q9Y467 1007 aaPredicted RBP11.81□□□□□ -0.52
RGPD6-209ENST00000480894 GNPATO15228 680 aa11.8□□□□□ -0.52
RGPD6-209ENST00000480894 GCGRP47871 477 aa11.79□□□□□ -0.52
RGPD6-209ENST00000480894 RBM26Q5T8P6 1007 aaKnown RBP11.79□□□□□ -0.52
RGPD6-209ENST00000480894 BRICD5Q6PL45 260 aa11.79□□□□□ -0.52
RGPD6-209ENST00000480894 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
RGPD6-209ENST00000480894 TTC24A2A3L6 582 aaPredicted RBP11.77□□□□□ -0.53
RGPD6-209ENST00000480894 NFX1Q12986 1120 aaKnown RBP11.77□□□□□ -0.53
RGPD6-209ENST00000480894 MSS51Q4VC12 460 aa11.77□□□□□ -0.53
RGPD6-209ENST00000480894 GPR37O15354 613 aa11.76□□□□□ -0.53
RGPD6-209ENST00000480894 ZBTB24O43167 697 aaPredicted RBP11.76□□□□□ -0.53
RGPD6-209ENST00000480894 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms