RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
CALD1-219ENST00000480638 HDGFP51858 240 aaKnown RBP11.99□□□□□ -0.49
CALD1-219ENST00000480638 RNF166Q96A37 237 aaPredicted RBP11.99□□□□□ -0.49
CALD1-219ENST00000480638 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.99□□□□□ -0.49
CALD1-219ENST00000480638 BCAMP50895 628 aa11.98□□□□□ -0.49
CALD1-219ENST00000480638 PDE4DQ08499 809 aa11.98□□□□□ -0.49
CALD1-219ENST00000480638 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
CALD1-219ENST00000480638 THSD4Q6ZMP0 1018 aa11.98□□□□□ -0.49
CALD1-219ENST00000480638 GPCPD1Q9NPB8 672 aa11.98□□□□□ -0.49
CALD1-219ENST00000480638 DAXXQ9UER7 740 aaPredicted RBP11.98□□□□□ -0.49
CALD1-219ENST00000480638 CLCN1P35523 988 aa11.97□□□□□ -0.49
CALD1-219ENST00000480638 TTLL12Q14166 644 aaPredicted RBP11.97□□□□□ -0.49
CALD1-219ENST00000480638 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
CALD1-219ENST00000480638 RNF40O75150 1001 aa11.96□□□□□ -0.49
CALD1-219ENST00000480638 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
CALD1-219ENST00000480638 PARP9Q8IXQ6 854 aa11.96□□□□□ -0.49
CALD1-219ENST00000480638 REPIN1Q9BWE0 567 aaKnown RBP11.96□□□□□ -0.49
CALD1-219ENST00000480638 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
CALD1-219ENST00000480638 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
CALD1-219ENST00000480638 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
CALD1-219ENST00000480638 TSR3Q9UJK0 312 aaKnown RBP11.91□□□□□ -0.5
CALD1-219ENST00000480638 DDX11L8A8MPP1 907 aa11.9□□□□□ -0.5
CALD1-219ENST00000480638 SULF1Q8IWU6 871 aa11.9□□□□□ -0.5
CALD1-219ENST00000480638 FAM217BQ9NTX9 383 aaPredicted RBP11.9□□□□□ -0.5
CALD1-219ENST00000480638 SLC10A3P09131 477 aa11.89□□□□□ -0.51
CALD1-219ENST00000480638 PTPN5P54829 565 aa11.88□□□□□ -0.51
CALD1-219ENST00000480638 PPP4CP60510 307 aa11.88□□□□□ -0.51
CALD1-219ENST00000480638 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
CALD1-219ENST00000480638 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
CALD1-219ENST00000480638 RDH13Q8NBN7 331 aa11.87□□□□□ -0.51
CALD1-219ENST00000480638 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
CALD1-219ENST00000480638 CD46P15529 392 aa11.86□□□□□ -0.51
CALD1-219ENST00000480638 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
CALD1-219ENST00000480638 MS4A1P11836 297 aa11.85□□□□□ -0.51
CALD1-219ENST00000480638 SSTR3P32745 418 aaPredicted RBP11.85□□□□□ -0.51
CALD1-219ENST00000480638 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
CALD1-219ENST00000480638 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
CALD1-219ENST00000480638 CFHP08603 1231 aa11.84□□□□□ -0.51
CALD1-219ENST00000480638 KDM4CQ9H3R0 1056 aa11.84□□□□□ -0.51
CALD1-219ENST00000480638 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
CALD1-219ENST00000480638 APLP1P51693 650 aa11.81□□□□□ -0.52
CALD1-219ENST00000480638 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
CALD1-219ENST00000480638 GCGRP47871 477 aa11.8□□□□□ -0.52
CALD1-219ENST00000480638 KMT5BQ4FZB7 885 aa11.8□□□□□ -0.52
CALD1-219ENST00000480638 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
CALD1-219ENST00000480638 PRR14Q9BWN1 585 aa11.78□□□□□ -0.52
CALD1-219ENST00000480638 ACTN4O43707 911 aaKnown RBP11.76□□□□□ -0.53
CALD1-219ENST00000480638 FAM117AQ9C073 453 aa11.74□□□□□ -0.53
CALD1-219ENST00000480638 KDM4AO75164 1064 aa11.73□□□□□ -0.53
CALD1-219ENST00000480638 FUT2Q10981 343 aa11.73□□□□□ -0.53
CALD1-219ENST00000480638 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
CALD1-219ENST00000480638 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
CALD1-219ENST00000480638 PCDHB3Q9Y5E6 796 aa11.71□□□□□ -0.53
CALD1-219ENST00000480638 USP46P62068 366 aa11.7□□□□□ -0.54
CALD1-219ENST00000480638 SPIRE2Q8WWL2 714 aa11.7□□□□□ -0.54
CALD1-219ENST00000480638 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
CALD1-219ENST00000480638 HOXA2O43364 376 aa11.69□□□□□ -0.54
CALD1-219ENST00000480638 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
CALD1-219ENST00000480638 ATP6V1AP38606 617 aa11.68□□□□□ -0.54
CALD1-219ENST00000480638 PUS10Q3MIT2 529 aaKnown RBP11.68□□□□□ -0.54
CALD1-219ENST00000480638 MTRQ99707 1265 aa11.68□□□□□ -0.54
CALD1-219ENST00000480638 BLOC1S3Q6QNY0 202 aa11.67□□□□□ -0.54
CALD1-219ENST00000480638 COPS2P61201 443 aa11.66□□□□□ -0.54
CALD1-219ENST00000480638 DIXDC1Q155Q3 683 aa11.66□□□□□ -0.54
CALD1-219ENST00000480638 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
CALD1-219ENST00000480638 MORN1Q5T089 497 aa11.66□□□□□ -0.54
CALD1-219ENST00000480638 TJAP1Q5JTD0 557 aa11.65□□□□□ -0.54
CALD1-219ENST00000480638 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
CALD1-219ENST00000480638 HLA-CQ95604 372 aa11.65□□□□□ -0.54
CALD1-219ENST00000480638 ITGBL1O95965 494 aaPredicted RBP11.64□□□□□ -0.55
CALD1-219ENST00000480638 MYSM1Q5VVJ2 828 aa11.64□□□□□ -0.55
CALD1-219ENST00000480638 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
CALD1-219ENST00000480638 MOXD2PA6NHM9 499 aa11.63□□□□□ -0.55
CALD1-219ENST00000480638 GUCA2AQ02747 115 aa11.63□□□□□ -0.55
CALD1-219ENST00000480638 NR1I2O75469 434 aa11.62□□□□□ -0.55
CALD1-219ENST00000480638 NDUFV2P19404 249 aa11.62□□□□□ -0.55
CALD1-219ENST00000480638 SLC27A5Q9Y2P5 690 aa11.62□□□□□ -0.55
CALD1-219ENST00000480638 RSPH6AQ9H0K4 717 aa11.61□□□□□ -0.55
CALD1-219ENST00000480638 ZPR1O75312 459 aa11.6□□□□□ -0.55
CALD1-219ENST00000480638 SH3D19Q5HYK7 790 aa11.6□□□□□ -0.55
CALD1-219ENST00000480638 RSBN1LQ6PCB5 846 aaPredicted RBP11.6□□□□□ -0.55
CALD1-219ENST00000480638 FDX1P10109 184 aa11.59□□□□□ -0.55
CALD1-219ENST00000480638 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
CALD1-219ENST00000480638 ZNF516Q92618 1163 aa11.59□□□□□ -0.55
CALD1-219ENST00000480638 SPTLC1O15269 473 aa11.58□□□□□ -0.56
CALD1-219ENST00000480638 TLL1O43897 1013 aa11.58□□□□□ -0.56
CALD1-219ENST00000480638 GJA5P36382 358 aa11.58□□□□□ -0.56
CALD1-219ENST00000480638 RIC3Q7Z5B4 369 aa11.58□□□□□ -0.56
CALD1-219ENST00000480638 PCDHGC3Q9UN70 934 aa11.58□□□□□ -0.56
CALD1-219ENST00000480638 CLK2P49760 499 aaKnown RBP11.57□□□□□ -0.56
CALD1-219ENST00000480638 KCNC4Q03721 635 aa11.57□□□□□ -0.56
CALD1-219ENST00000480638 LIMD1Q9UGP4 676 aa11.57□□□□□ -0.56
CALD1-219ENST00000480638 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
CALD1-219ENST00000480638 Q3C1V9 767 aa11.55□□□□□ -0.56
CALD1-219ENST00000480638 RNF19BQ6ZMZ0 732 aa11.55□□□□□ -0.56
CALD1-219ENST00000480638 THAP11Q96EK4 314 aa11.55□□□□□ -0.56
CALD1-219ENST00000480638 GOPCQ9HD26 462 aa11.55□□□□□ -0.56
CALD1-219ENST00000480638 POLR3EQ9NVU0 708 aa11.55□□□□□ -0.56
CALD1-219ENST00000480638 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
CALD1-219ENST00000480638 SALL2Q9Y467 1007 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms