RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
TRA2B-212ENST00000480461 ACIN1Q9UKV3 1341 aaKnown RBP18.12■□□□□ 0.49
TRA2B-212ENST00000480461 NOS1P29475 1434 aa18.12■□□□□ 0.49
TRA2B-212ENST00000480461 FAM135BQ49AJ0 1406 aa18.12■□□□□ 0.49
TRA2B-212ENST00000480461 E9PCH4 1651 aa18.11■□□□□ 0.49
TRA2B-212ENST00000480461 CFAP65Q6ZU64 1925 aaKnown RBP18.1■□□□□ 0.49
TRA2B-212ENST00000480461 IDI1Q13907 227 aa18.1■□□□□ 0.49
TRA2B-212ENST00000480461 RPRD2Q5VT52 1461 aaKnown RBP18.09■□□□□ 0.49
TRA2B-212ENST00000480461 LTKP29376 864 aa18.09■□□□□ 0.49
TRA2B-212ENST00000480461 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
TRA2B-212ENST00000480461 ROBO1Q9Y6N7 1651 aa18.08■□□□□ 0.48
TRA2B-212ENST00000480461 TXNDC2Q86VQ3 553 aa18.05■□□□□ 0.48
TRA2B-212ENST00000480461 TMEM94Q12767 1356 aa18.04■□□□□ 0.48
TRA2B-212ENST00000480461 PIK3C2BO00750 1634 aa18.03■□□□□ 0.48
TRA2B-212ENST00000480461 SLC52A1Q9NWF4 448 aa18.03■□□□□ 0.48
TRA2B-212ENST00000480461 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.47
TRA2B-212ENST00000480461 ANKRD30BQ9BXX2 1392 aa18.01■□□□□ 0.47
TRA2B-212ENST00000480461 TMEM2Q9UHN6 1383 aa18.01■□□□□ 0.47
TRA2B-212ENST00000480461 EID1Q9Y6B2 187 aa18■□□□□ 0.47
TRA2B-212ENST00000480461 NWD1Q149M9 1564 aa17.99■□□□□ 0.47
TRA2B-212ENST00000480461 KDM5AP29375 1690 aaKnown RBP17.99■□□□□ 0.47
TRA2B-212ENST00000480461 NKTRP30414 1462 aaKnown RBP17.97■□□□□ 0.47
TRA2B-212ENST00000480461 PHLPP1O60346 1717 aa17.96■□□□□ 0.47
TRA2B-212ENST00000480461 TRPM2O94759 1503 aa17.95■□□□□ 0.46
TRA2B-212ENST00000480461 KCNA6P17658 529 aa17.95■□□□□ 0.46
TRA2B-212ENST00000480461 SPHKAPQ2M3C7 1700 aa17.95■□□□□ 0.46
TRA2B-212ENST00000480461 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
TRA2B-212ENST00000480461 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
TRA2B-212ENST00000480461 RBM33Q96EV2 1170 aaKnown RBP17.93■□□□□ 0.46
TRA2B-212ENST00000480461 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
TRA2B-212ENST00000480461 JCADQ9P266 1359 aa17.92■□□□□ 0.46
TRA2B-212ENST00000480461 COL16A1Q07092 1604 aaPredicted RBP17.92■□□□□ 0.46
TRA2B-212ENST00000480461 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
TRA2B-212ENST00000480461 PROSER2Q86WR7 435 aaPredicted RBP17.91■□□□□ 0.46
TRA2B-212ENST00000480461 SLC26A8Q96RN1 970 aa17.91■□□□□ 0.46
TRA2B-212ENST00000480461 MSH6P52701 1360 aa17.91■□□□□ 0.46
TRA2B-212ENST00000480461 TMEM131LA2VDJ0 1609 aa17.9■□□□□ 0.46
TRA2B-212ENST00000480461 LRP6O75581 1613 aa17.9■□□□□ 0.46
TRA2B-212ENST00000480461 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
TRA2B-212ENST00000480461 CCDC144AA2RUR9 1427 aa17.89■□□□□ 0.46
TRA2B-212ENST00000480461 RGL3Q3MIN7 710 aa17.89■□□□□ 0.45
TRA2B-212ENST00000480461 NUTM2DQ5VT03 806 aaPredicted RBP17.88■□□□□ 0.45
TRA2B-212ENST00000480461 SPATA31E1Q6ZUB1 1445 aa17.88■□□□□ 0.45
TRA2B-212ENST00000480461 UPF1Q92900 1129 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRA2B-212ENST00000480461 SLAIN2Q9P270 581 aa17.86■□□□□ 0.45
TRA2B-212ENST00000480461 ZFYVE9O95405 1425 aa17.84■□□□□ 0.45
TRA2B-212ENST00000480461 NEUROD1Q13562 356 aa17.84■□□□□ 0.45
TRA2B-212ENST00000480461 ZNF326Q5BKZ1 582 aaKnown RBP17.84■□□□□ 0.45
TRA2B-212ENST00000480461 RIMS2Q9UQ26 1411 aa17.83■□□□□ 0.45
TRA2B-212ENST00000480461 MYO5BQ9ULV0 1848 aa17.83■□□□□ 0.44
TRA2B-212ENST00000480461 CHD2O14647 1828 aaKnown RBP17.82■□□□□ 0.44
TRA2B-212ENST00000480461 SPATA31A6Q5VVP1 1343 aa17.82■□□□□ 0.44
TRA2B-212ENST00000480461 SHPRHQ149N8 1683 aa17.82■□□□□ 0.44
TRA2B-212ENST00000480461 AHDC1Q5TGY3 1603 aaPredicted RBP17.82■□□□□ 0.44
TRA2B-212ENST00000480461 ZNF772Q68DY9 489 aaPredicted RBP17.8■□□□□ 0.44
TRA2B-212ENST00000480461 RPGRIP1LQ68CZ1 1315 aa17.79■□□□□ 0.44
TRA2B-212ENST00000480461 CCER1Q8TC90 406 aaPredicted RBP17.79■□□□□ 0.44
TRA2B-212ENST00000480461 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
TRA2B-212ENST00000480461 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
TRA2B-212ENST00000480461 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRA2B-212ENST00000480461 KIF1BO60333 1816 aa17.77■□□□□ 0.44
TRA2B-212ENST00000480461 ADGRF5Q8IZF2 1346 aa17.77■□□□□ 0.44
TRA2B-212ENST00000480461 HDGFP51858 240 aaKnown RBP17.77■□□□□ 0.44
TRA2B-212ENST00000480461 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.44
TRA2B-212ENST00000480461 NCOA3Q9Y6Q9 1424 aa17.77■□□□□ 0.44
TRA2B-212ENST00000480461 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.43
TRA2B-212ENST00000480461 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
TRA2B-212ENST00000480461 DIP2AQ14689 1571 aa17.76■□□□□ 0.43
TRA2B-212ENST00000480461 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
TRA2B-212ENST00000480461 BCANQ96GW7 911 aa17.76■□□□□ 0.43
TRA2B-212ENST00000480461 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
TRA2B-212ENST00000480461 VGFO15240 615 aaPredicted RBP17.75■□□□□ 0.43
TRA2B-212ENST00000480461 KDM2AQ9Y2K7 1162 aa17.75■□□□□ 0.43
TRA2B-212ENST00000480461 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
TRA2B-212ENST00000480461 SRCAPQ6ZRS2 3230 aa17.73■□□□□ 0.43
TRA2B-212ENST00000480461 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
TRA2B-212ENST00000480461 RXRBP28702 533 aa17.72■□□□□ 0.43
TRA2B-212ENST00000480461 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
TRA2B-212ENST00000480461 CADPS2Q86UW7 1296 aa17.7■□□□□ 0.42
TRA2B-212ENST00000480461 C14orf37Q86TY3 774 aa17.69■□□□□ 0.42
TRA2B-212ENST00000480461 TBX22Q9Y458 520 aa17.69■□□□□ 0.42
TRA2B-212ENST00000480461 PPLO60437 1756 aa17.68■□□□□ 0.42
TRA2B-212ENST00000480461 RGS12O14924 1447 aa17.67■□□□□ 0.42
TRA2B-212ENST00000480461 BRINP3Q76B58 766 aa17.67■□□□□ 0.42
TRA2B-212ENST00000480461 C19orf44Q9H6X5 657 aa17.67■□□□□ 0.42
TRA2B-212ENST00000480461 ATF3P18847 181 aa17.66■□□□□ 0.42
TRA2B-212ENST00000480461 CFAP70Q5T0N1 1121 aa17.66■□□□□ 0.42
TRA2B-212ENST00000480461 NRXN1Q9ULB1 1477 aa17.66■□□□□ 0.42
TRA2B-212ENST00000480461 IFT172Q9UG01 1749 aa17.66■□□□□ 0.42
TRA2B-212ENST00000480461 ASXL1Q8IXJ9 1541 aa17.66■□□□□ 0.42
TRA2B-212ENST00000480461 AFF2P51816 1311 aa17.66■□□□□ 0.42
TRA2B-212ENST00000480461 METP08581 1390 aa17.66■□□□□ 0.42
TRA2B-212ENST00000480461 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
TRA2B-212ENST00000480461 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
TRA2B-212ENST00000480461 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
TRA2B-212ENST00000480461 C14orf93Q9H972 538 aaKnown RBP17.65■□□□□ 0.42
TRA2B-212ENST00000480461 NHSL1Q5SYE7 1610 aa17.65■□□□□ 0.42
TRA2B-212ENST00000480461 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
TRA2B-212ENST00000480461 DCCP43146 1447 aa17.64■□□□□ 0.42
TRA2B-212ENST00000480461 MYOM2P54296 1465 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms