RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
RERE-213ENST00000480342 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
RERE-213ENST00000480342 CAMSAP1Q5T5Y3 1602 aa13.24□□□□□ -0.29
RERE-213ENST00000480342 CYB5RLQ6IPT4 315 aa13.24□□□□□ -0.29
RERE-213ENST00000480342 AFAP1Q8N556 730 aa13.24□□□□□ -0.29
RERE-213ENST00000480342 KIF1BO60333 1816 aa13.24□□□□□ -0.29
RERE-213ENST00000480342 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
RERE-213ENST00000480342 SKAP1Q86WV1 359 aa13.23□□□□□ -0.29
RERE-213ENST00000480342 TRPM1Q7Z4N2 1603 aa13.23□□□□□ -0.29
RERE-213ENST00000480342 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
RERE-213ENST00000480342 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
RERE-213ENST00000480342 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
RERE-213ENST00000480342 ARHGEF40Q8TER5 1519 aa13.22□□□□□ -0.29
RERE-213ENST00000480342 IFT172Q9UG01 1749 aa13.21□□□□□ -0.29
RERE-213ENST00000480342 PLIN1O60240 522 aa13.21□□□□□ -0.29
RERE-213ENST00000480342 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
RERE-213ENST00000480342 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
RERE-213ENST00000480342 ABCC3O15438 1527 aa13.21□□□□□ -0.3
RERE-213ENST00000480342 CLTCL1P53675 1640 aa13.21□□□□□ -0.3
RERE-213ENST00000480342 NEFMP07197 916 aa13.2□□□□□ -0.3
RERE-213ENST00000480342 PDE4AP27815 886 aa13.2□□□□□ -0.3
RERE-213ENST00000480342 PPP6R1Q9UPN7 881 aa13.2□□□□□ -0.3
RERE-213ENST00000480342 CDCA7LQ96GN5 454 aa13.19□□□□□ -0.3
RERE-213ENST00000480342 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
RERE-213ENST00000480342 DCAF11Q8TEB1 546 aa13.19□□□□□ -0.3
RERE-213ENST00000480342 PIK3C2BO00750 1634 aa13.18□□□□□ -0.3
RERE-213ENST00000480342 ARID4BQ4LE39 1312 aaPredicted RBP13.18□□□□□ -0.3
RERE-213ENST00000480342 MYOM2P54296 1465 aa13.18□□□□□ -0.3
RERE-213ENST00000480342 TSPOAP1O95153 1857 aa13.17□□□□□ -0.3
RERE-213ENST00000480342 GPRASP1Q5JY77 1395 aa13.17□□□□□ -0.3
RERE-213ENST00000480342 MYBBP1AQ9BQG0 1328 aaKnown RBP13.16□□□□□ -0.3
RERE-213ENST00000480342 MADDQ8WXG6 1647 aa13.16□□□□□ -0.3
RERE-213ENST00000480342 PRAG1Q86YV5 1406 aa13.16□□□□□ -0.3
RERE-213ENST00000480342 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
RERE-213ENST00000480342 ADGRB3O60242 1522 aa13.16□□□□□ -0.3
RERE-213ENST00000480342 FAM69CQ0P6D2 419 aa13.15□□□□□ -0.3
RERE-213ENST00000480342 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
RERE-213ENST00000480342 BACH2Q9BYV9 841 aa13.14□□□□□ -0.31
RERE-213ENST00000480342 KIF3BO15066 747 aa13.13□□□□□ -0.31
RERE-213ENST00000480342 RALBP1Q15311 655 aa13.13□□□□□ -0.31
RERE-213ENST00000480342 ROCK2O75116 1388 aaKnown RBP13.12□□□□□ -0.31
RERE-213ENST00000480342 NOS1P29475 1434 aa13.12□□□□□ -0.31
RERE-213ENST00000480342 SLC4A3P48751 1232 aa13.12□□□□□ -0.31
RERE-213ENST00000480342 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
RERE-213ENST00000480342 LRPPRCP42704 1394 aaKnown RBP13.12□□□□□ -0.31
RERE-213ENST00000480342 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
RERE-213ENST00000480342 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
RERE-213ENST00000480342 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
RERE-213ENST00000480342 PPLO60437 1756 aa13.11□□□□□ -0.31
RERE-213ENST00000480342 PREX1Q8TCU6 1659 aa13.11□□□□□ -0.31
RERE-213ENST00000480342 NRXN1Q9ULB1 1477 aa13.11□□□□□ -0.31
RERE-213ENST00000480342 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
RERE-213ENST00000480342 SETBP1Q9Y6X0 1596 aa13.1□□□□□ -0.31
RERE-213ENST00000480342 CRBNQ96SW2 442 aa13.1□□□□□ -0.31
RERE-213ENST00000480342 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
RERE-213ENST00000480342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.319e-10■■■□□ 18.2
RERE-213ENST00000480342 NPATQ14207 1427 aa13.09□□□□□ -0.31
RERE-213ENST00000480342 YEATS2Q9ULM3 1422 aa13.09□□□□□ -0.31
RERE-213ENST00000480342 KTN1Q86UP2 1357 aaKnown RBP13.08□□□□□ -0.32
RERE-213ENST00000480342 SIGLEC1Q9BZZ2 1709 aa13.08□□□□□ -0.32
RERE-213ENST00000480342 RPGRIP1LQ68CZ1 1315 aa13.07□□□□□ -0.32
RERE-213ENST00000480342 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
RERE-213ENST00000480342 C20orf194Q5TEA3 1177 aa13.07□□□□□ -0.32
RERE-213ENST00000480342 SYNMO15061 1565 aa13.07□□□□□ -0.32
RERE-213ENST00000480342 MYO3AQ8NEV4 1616 aa13.07□□□□□ -0.32
RERE-213ENST00000480342 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
RERE-213ENST00000480342 SPATA31D1Q6ZQQ2 1576 aa13.06□□□□□ -0.32
RERE-213ENST00000480342 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
RERE-213ENST00000480342 MS4A1P11836 297 aa13.05□□□□□ -0.32
RERE-213ENST00000480342 PPM1GO15355 546 aaPredicted RBP13.04□□□□□ -0.32
RERE-213ENST00000480342 ZFYVE9O95405 1425 aa13.04□□□□□ -0.32
RERE-213ENST00000480342 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
RERE-213ENST00000480342 PDE3BQ13370 1112 aa13.04□□□□□ -0.32
RERE-213ENST00000480342 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
RERE-213ENST00000480342 RAPGEF3O95398 923 aa13.04□□□□□ -0.32
RERE-213ENST00000480342 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
RERE-213ENST00000480342 UGGT1Q9NYU2 1555 aa13.03□□□□□ -0.32
RERE-213ENST00000480342 PANK3Q9H999 370 aa13.03□□□□□ -0.32
RERE-213ENST00000480342 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
RERE-213ENST00000480342 CLTCQ00610 1675 aaKnown RBP13.02□□□□□ -0.32
RERE-213ENST00000480342 PER1O15534 1290 aaPredicted RBP13.02□□□□□ -0.33
RERE-213ENST00000480342 WASHC2CQ9Y4E1 1318 aa13.01□□□□□ -0.33
RERE-213ENST00000480342 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
RERE-213ENST00000480342 SLC52A1Q9NWF4 448 aa13.01□□□□□ -0.33
RERE-213ENST00000480342 PARD3Q8TEW0 1356 aa13.01□□□□□ -0.33
RERE-213ENST00000480342 TMEM131LA2VDJ0 1609 aa13.01□□□□□ -0.33
RERE-213ENST00000480342 EIF3AQ14152 1382 aaKnown RBP13□□□□□ -0.33
RERE-213ENST00000480342 SCAF11Q99590 1463 aaKnown RBP13□□□□□ -0.33
RERE-213ENST00000480342 NFKBIBQ15653 356 aa13□□□□□ -0.33
RERE-213ENST00000480342 DDRGK1Q96HY6 314 aa13□□□□□ -0.33
RERE-213ENST00000480342 ADAMTS8Q9UP79 889 aa13□□□□□ -0.33
RERE-213ENST00000480342 NEXMIFQ5QGS0 1516 aa13□□□□□ -0.33
RERE-213ENST00000480342 RGS3P49796 1198 aa12.99□□□□□ -0.33
RERE-213ENST00000480342 COL17A1Q9UMD9 1497 aaPredicted RBP12.99□□□□□ -0.33
RERE-213ENST00000480342 GSE1Q14687 1217 aa12.98□□□□□ -0.33
RERE-213ENST00000480342 DISP3Q9P2K9 1392 aa12.97□□□□□ -0.33
RERE-213ENST00000480342 SBNO2Q9Y2G9 1366 aa12.97□□□□□ -0.33
RERE-213ENST00000480342 PIK3C2GO75747 1445 aa12.97□□□□□ -0.33
RERE-213ENST00000480342 FRAT1Q92837 279 aaPredicted RBP12.96□□□□□ -0.33
RERE-213ENST00000480342 GGT6Q6P531 493 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms