RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 MROH2AA6NES4 1674 aa22.89■■□□□ 1.25
PKD1-213ENST00000480227 MAP3K4Q9Y6R4 1608 aa22.88■■□□□ 1.25
PKD1-213ENST00000480227 KNSTRNQ9Y448 316 aa22.88■■□□□ 1.25
PKD1-213ENST00000480227 FANCIQ9NVI1 1328 aa22.88■■□□□ 1.25
PKD1-213ENST00000480227 KIAA1210Q9ULL0 1709 aa22.88■■□□□ 1.25
PKD1-213ENST00000480227 ABCA6Q8N139 1617 aa22.88■■□□□ 1.25
PKD1-213ENST00000480227 CDCA7LQ96GN5 454 aa22.87■■□□□ 1.25
PKD1-213ENST00000480227 CD109Q6YHK3 1445 aa22.87■■□□□ 1.25
PKD1-213ENST00000480227 MYOM1P52179 1685 aa22.86■■□□□ 1.25
PKD1-213ENST00000480227 SYNMO15061 1565 aa22.86■■□□□ 1.25
PKD1-213ENST00000480227 NEURL4Q96JN8 1562 aa22.85■■□□□ 1.25
PKD1-213ENST00000480227 AMER1Q5JTC6 1135 aaPredicted RBP22.85■■□□□ 1.25
PKD1-213ENST00000480227 BLMP54132 1417 aaPredicted RBP22.84■■□□□ 1.25
PKD1-213ENST00000480227 EIF3AQ14152 1382 aaKnown RBP22.84■■□□□ 1.25
PKD1-213ENST00000480227 IFT172Q9UG01 1749 aa22.84■■□□□ 1.25
PKD1-213ENST00000480227 CDCA8Q53HL2 280 aa22.84■■□□□ 1.25
PKD1-213ENST00000480227 MYOM2P54296 1465 aa22.83■■□□□ 1.25
PKD1-213ENST00000480227 POGZQ7Z3K3 1410 aa22.83■■□□□ 1.25
PKD1-213ENST00000480227 GGT6Q6P531 493 aa22.83■■□□□ 1.24
PKD1-213ENST00000480227 RCAN3Q9UKA8 241 aa22.83■■□□□ 1.24
PKD1-213ENST00000480227 PPP2R1AP30153 589 aa22.82■■□□□ 1.24
PKD1-213ENST00000480227 FRMPD1Q5SYB0 1578 aa22.82■■□□□ 1.24
PKD1-213ENST00000480227 CHGAP10645 457 aaKnown RBP22.82■■□□□ 1.24
PKD1-213ENST00000480227 RRP1P56182 461 aaKnown RBP22.82■■□□□ 1.24
PKD1-213ENST00000480227 KDM5AP29375 1690 aaKnown RBP22.81■■□□□ 1.24
PKD1-213ENST00000480227 LMTK2Q8IWU2 1503 aa22.81■■□□□ 1.24
PKD1-213ENST00000480227 PDE3BQ13370 1112 aa22.81■■□□□ 1.24
PKD1-213ENST00000480227 ADAMTS8Q9UP79 889 aa22.81■■□□□ 1.24
PKD1-213ENST00000480227 CFAP74Q9C0B2 1584 aa22.79■■□□□ 1.24
PKD1-213ENST00000480227 ASXL1Q8IXJ9 1541 aa22.78■■□□□ 1.24
PKD1-213ENST00000480227 NPATQ14207 1427 aa22.78■■□□□ 1.24
PKD1-213ENST00000480227 HECW2Q9P2P5 1572 aa22.78■■□□□ 1.24
PKD1-213ENST00000480227 NOS1P29475 1434 aa22.78■■□□□ 1.24
PKD1-213ENST00000480227 ERVK-7P63135 1459 aa22.77■■□□□ 1.24
PKD1-213ENST00000480227 ZMYM4Q5VZL5 1548 aa22.77■■□□□ 1.24
PKD1-213ENST00000480227 MLH3Q9UHC1 1453 aa22.77■■□□□ 1.24
PKD1-213ENST00000480227 INSRP06213 1382 aa22.76■■□□□ 1.23
PKD1-213ENST00000480227 EXOC6Q8TAG9 804 aa22.76■■□□□ 1.23
PKD1-213ENST00000480227 ADGRB3O60242 1522 aa22.76■■□□□ 1.23
PKD1-213ENST00000480227 RAPGEF3O95398 923 aa22.75■■□□□ 1.23
PKD1-213ENST00000480227 NRXN1Q9ULB1 1477 aa22.74■■□□□ 1.23
PKD1-213ENST00000480227 WDR43Q15061 677 aaKnown RBP eCLIP22.72■■□□□ 1.23
PKD1-213ENST00000480227 PPLO60437 1756 aa22.71■■□□□ 1.23
PKD1-213ENST00000480227 ERICH6Q7L0X2 663 aa22.71■■□□□ 1.23
PKD1-213ENST00000480227 ABCC3O15438 1527 aa22.69■■□□□ 1.22
PKD1-213ENST00000480227 PLIN1O60240 522 aa22.69■■□□□ 1.22
PKD1-213ENST00000480227 CARD14Q9BXL6 1004 aa22.69■■□□□ 1.22
PKD1-213ENST00000480227 TRAK1Q9UPV9 953 aa22.69■■□□□ 1.22
PKD1-213ENST00000480227 PLEKHH1Q9ULM0 1364 aa22.68■■□□□ 1.22
PKD1-213ENST00000480227 PIK3C2GO75747 1445 aa22.68■■□□□ 1.22
PKD1-213ENST00000480227 MYO3AQ8NEV4 1616 aa22.67■■□□□ 1.22
PKD1-213ENST00000480227 SIGLEC1Q9BZZ2 1709 aa22.67■■□□□ 1.22
PKD1-213ENST00000480227 NPC1L1Q9UHC9 1359 aa22.67■■□□□ 1.22
PKD1-213ENST00000480227 TMEM132EQ6IEE7 984 aa22.67■■□□□ 1.22
PKD1-213ENST00000480227 CENPJQ9HC77 1338 aaPredicted RBP22.66■■□□□ 1.22
PKD1-213ENST00000480227 NUTM2DQ5VT03 806 aaPredicted RBP22.65■■□□□ 1.22
PKD1-213ENST00000480227 CAMSAP1Q5T5Y3 1602 aa22.65■■□□□ 1.22
PKD1-213ENST00000480227 SETBP1Q9Y6X0 1596 aa22.65■■□□□ 1.22
PKD1-213ENST00000480227 SLC24A1O60721 1099 aa22.64■■□□□ 1.21
PKD1-213ENST00000480227 CCDC146Q8IYE0 955 aa22.63■■□□□ 1.21
PKD1-213ENST00000480227 C14orf93Q9H972 538 aaKnown RBP22.63■■□□□ 1.21
PKD1-213ENST00000480227 NEO1Q92859 1461 aa22.63■■□□□ 1.21
PKD1-213ENST00000480227 SBNO2Q9Y2G9 1366 aa22.62■■□□□ 1.21
PKD1-213ENST00000480227 QRICH2Q9H0J4 1663 aa22.62■■□□□ 1.21
PKD1-213ENST00000480227 DIP2CQ9Y2E4 1556 aa22.62■■□□□ 1.21
PKD1-213ENST00000480227 ADGRB1O14514 1584 aa22.61■■□□□ 1.21
PKD1-213ENST00000480227 ZC3H13Q5T200 1668 aaKnown RBP22.6■■□□□ 1.21
PKD1-213ENST00000480227 RICTORQ6R327 1708 aa22.59■■□□□ 1.21
PKD1-213ENST00000480227 ZNF521Q96K83 1311 aa22.59■■□□□ 1.21
PKD1-213ENST00000480227 DUSP27Q5VZP5 1158 aa22.58■■□□□ 1.21
PKD1-213ENST00000480227 SLC12A5Q9H2X9 1139 aa22.57■■□□□ 1.2
PKD1-213ENST00000480227 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
PKD1-213ENST00000480227 CRBNQ96SW2 442 aa22.56■■□□□ 1.2
PKD1-213ENST00000480227 YEATS2Q9ULM3 1422 aa22.56■■□□□ 1.2
PKD1-213ENST00000480227 PIK3C2BO00750 1634 aa22.56■■□□□ 1.2
PKD1-213ENST00000480227 RPGRIP1LQ68CZ1 1315 aa22.55■■□□□ 1.2
PKD1-213ENST00000480227 GOLGA2Q08379 1002 aa22.55■■□□□ 1.2
PKD1-213ENST00000480227 C20orf194Q5TEA3 1177 aa22.55■■□□□ 1.2
PKD1-213ENST00000480227 NSD3Q9BZ95 1437 aa22.55■■□□□ 1.2
PKD1-213ENST00000480227 APAF1O14727 1248 aa22.54■■□□□ 1.2
PKD1-213ENST00000480227 GLI2P10070 1586 aa22.53■■□□□ 1.2
PKD1-213ENST00000480227 NEXMIFQ5QGS0 1516 aa22.53■■□□□ 1.2
PKD1-213ENST00000480227 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
PKD1-213ENST00000480227 IDI1Q13907 227 aa22.52■■□□□ 1.19
PKD1-213ENST00000480227 SPINK5Q9NQ38 1064 aaPredicted RBP22.51■■□□□ 1.19
PKD1-213ENST00000480227 MYO5BQ9ULV0 1848 aa22.51■■□□□ 1.19
PKD1-213ENST00000480227 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
PKD1-213ENST00000480227 ANP32AP39687 249 aaKnown RBP22.5■■□□□ 1.19
PKD1-213ENST00000480227 SLFN5Q08AF3 891 aa22.49■■□□□ 1.19
PKD1-213ENST00000480227 ARHGEF28Q8N1W1 1705 aaKnown RBP22.49■■□□□ 1.19
PKD1-213ENST00000480227 VGFO15240 615 aaPredicted RBP22.49■■□□□ 1.19
PKD1-213ENST00000480227 NOP58Q9Y2X3 529 aaKnown RBP22.49■■□□□ 1.19
PKD1-213ENST00000480227 MORC1Q86VD1 984 aa22.48■■□□□ 1.19
PKD1-213ENST00000480227 TCERG1O14776 1098 aaKnown RBP22.47■■□□□ 1.19
PKD1-213ENST00000480227 SAFB2Q14151 953 aaKnown RBP eCLIP22.47■■□□□ 1.19
PKD1-213ENST00000480227 PAK3O75914 559 aaPredicted RBP22.47■■□□□ 1.19
PKD1-213ENST00000480227 DMRT2Q9Y5R5 561 aa22.46■■□□□ 1.19
PKD1-213ENST00000480227 ARHGAP31Q2M1Z3 1444 aa22.46■■□□□ 1.19
PKD1-213ENST00000480227 SKAP1Q86WV1 359 aa22.46■■□□□ 1.19
PKD1-213ENST00000480227 POLR3AO14802 1390 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms