RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
PKP4-210ENST00000480171 CDCA8Q53HL2 280 aa11.45□□□□□ -0.58
PKP4-210ENST00000480171 PPP6R1Q9UPN7 881 aa11.45□□□□□ -0.58
PKP4-210ENST00000480171 MAGI2Q86UL8 1455 aa11.44□□□□□ -0.58
PKP4-210ENST00000480171 BACH2Q9BYV9 841 aa11.44□□□□□ -0.58
PKP4-210ENST00000480171 KNSTRNQ9Y448 316 aa11.44□□□□□ -0.58
PKP4-210ENST00000480171 RNF17Q9BXT8 1623 aaKnown RBP11.43□□□□□ -0.58
PKP4-210ENST00000480171 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.58
PKP4-210ENST00000480171 STAC3Q96MF2 364 aa11.43□□□□□ -0.58
PKP4-210ENST00000480171 EFCAB2Q5VUJ9 269 aa11.42□□□□□ -0.58
PKP4-210ENST00000480171 ABCC2Q92887 1545 aa11.42□□□□□ -0.58
PKP4-210ENST00000480171 CRBNQ96SW2 442 aa11.41□□□□□ -0.58
PKP4-210ENST00000480171 PLIN1O60240 522 aa11.41□□□□□ -0.58
PKP4-210ENST00000480171 PLCH2O75038 1416 aa11.4□□□□□ -0.58
PKP4-210ENST00000480171 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.4□□□□□ -0.58
PKP4-210ENST00000480171 ADAMTS8Q9UP79 889 aa11.4□□□□□ -0.58
PKP4-210ENST00000480171 SHROOM2Q13796 1616 aa11.4□□□□□ -0.58
PKP4-210ENST00000480171 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
PKP4-210ENST00000480171 CHD1O14646 1710 aa11.39□□□□□ -0.59
PKP4-210ENST00000480171 PPP2R1AP30153 589 aa11.39□□□□□ -0.59
PKP4-210ENST00000480171 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
PKP4-210ENST00000480171 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
PKP4-210ENST00000480171 IQGAP1P46940 1657 aa11.38□□□□□ -0.59
PKP4-210ENST00000480171 PPM1GO15355 546 aaPredicted RBP11.38□□□□□ -0.59
PKP4-210ENST00000480171 USP35Q9P2H5 1018 aa11.38□□□□□ -0.59
PKP4-210ENST00000480171 SCAF11Q99590 1463 aaKnown RBP11.37□□□□□ -0.59
PKP4-210ENST00000480171 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
PKP4-210ENST00000480171 SYNMO15061 1565 aa11.37□□□□□ -0.59
PKP4-210ENST00000480171 PKNOX2Q96KN3 472 aa11.37□□□□□ -0.59
PKP4-210ENST00000480171 EIF3AQ14152 1382 aaKnown RBP11.37□□□□□ -0.59
PKP4-210ENST00000480171 SCAPERQ9BY12 1400 aa11.37□□□□□ -0.59
PKP4-210ENST00000480171 ABCC1P33527 1531 aa11.36□□□□□ -0.59
PKP4-210ENST00000480171 CENPQQ7L2Z9 268 aaPredicted RBP11.36□□□□□ -0.59
PKP4-210ENST00000480171 TRPM2O94759 1503 aa11.36□□□□□ -0.59
PKP4-210ENST00000480171 SPAG9O60271 1321 aaKnown RBP11.36□□□□□ -0.59
PKP4-210ENST00000480171 ASXL1Q8IXJ9 1541 aa11.36□□□□□ -0.59
PKP4-210ENST00000480171 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
PKP4-210ENST00000480171 NPC1L1Q9UHC9 1359 aa11.35□□□□□ -0.59
PKP4-210ENST00000480171 SPHKAPQ2M3C7 1700 aa11.35□□□□□ -0.59
PKP4-210ENST00000480171 DUSP27Q5VZP5 1158 aa11.35□□□□□ -0.59
PKP4-210ENST00000480171 RTEL1-TNFRSF6BF6WH68 1400 aa11.35□□□□□ -0.59
PKP4-210ENST00000480171 CEP152O94986 1710 aa11.34□□□□□ -0.59
PKP4-210ENST00000480171 KANK1Q14678 1352 aa11.34□□□□□ -0.59
PKP4-210ENST00000480171 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
PKP4-210ENST00000480171 TRAPPC8Q9Y2L5 1435 aa11.34□□□□□ -0.59
PKP4-210ENST00000480171 PLEKHH1Q9ULM0 1364 aa11.34□□□□□ -0.59
PKP4-210ENST00000480171 BCL11BQ9C0K0 894 aaPredicted RBP11.33□□□□□ -0.59
PKP4-210ENST00000480171 NEFMP07197 916 aa11.33□□□□□ -0.6
PKP4-210ENST00000480171 PTPRTO14522 1441 aa11.33□□□□□ -0.6
PKP4-210ENST00000480171 KDM2BQ8NHM5 1336 aa11.33□□□□□ -0.6
PKP4-210ENST00000480171 ZNF521Q96K83 1311 aa11.33□□□□□ -0.6
PKP4-210ENST00000480171 ZCCHC11Q5TAX3 1644 aaKnown RBP11.33□□□□□ -0.6
PKP4-210ENST00000480171 C20orf194Q5TEA3 1177 aa11.33□□□□□ -0.6
PKP4-210ENST00000480171 LAS1LQ9Y4W2 734 aaKnown RBP11.33□□□□□ -0.6
PKP4-210ENST00000480171 UHRF1BP1LA0JNW5 1464 aa11.32□□□□□ -0.6
PKP4-210ENST00000480171 SLFN5Q08AF3 891 aa11.32□□□□□ -0.6
PKP4-210ENST00000480171 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
PKP4-210ENST00000480171 ERCC6L2Q5T890 1561 aa11.31□□□□□ -0.6
PKP4-210ENST00000480171 KIAA1210Q9ULL0 1709 aa11.31□□□□□ -0.6
PKP4-210ENST00000480171 KDM5AP29375 1690 aaKnown RBP11.31□□□□□ -0.6
PKP4-210ENST00000480171 CLTCL1P53675 1640 aa11.31□□□□□ -0.6
PKP4-210ENST00000480171 ARAP3Q8WWN8 1544 aa11.31□□□□□ -0.6
PKP4-210ENST00000480171 TET3O43151 1660 aa11.3□□□□□ -0.6
PKP4-210ENST00000480171 IGSF3O75054 1194 aa11.3□□□□□ -0.6
PKP4-210ENST00000480171 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
PKP4-210ENST00000480171 ZFYVE16Q7Z3T8 1539 aa11.29□□□□□ -0.6
PKP4-210ENST00000480171 DEPDC5O75140 1603 aa11.29□□□□□ -0.6
PKP4-210ENST00000480171 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
PKP4-210ENST00000480171 AFAP1Q8N556 730 aa11.28□□□□□ -0.6
PKP4-210ENST00000480171 MYOM1P52179 1685 aa11.28□□□□□ -0.6
PKP4-210ENST00000480171 E9PSI1 815 aa11.28□□□□□ -0.6
PKP4-210ENST00000480171 TRMT2AQ8IZ69 625 aaKnown RBP11.28□□□□□ -0.6
PKP4-210ENST00000480171 NKTRP30414 1462 aaKnown RBP11.28□□□□□ -0.6
PKP4-210ENST00000480171 ZBTB22O15209 634 aa11.28□□□□□ -0.6
PKP4-210ENST00000480171 SKAP1Q86WV1 359 aa11.27□□□□□ -0.61
PKP4-210ENST00000480171 CCDC146Q8IYE0 955 aa11.27□□□□□ -0.61
PKP4-210ENST00000480171 APAF1O14727 1248 aa11.27□□□□□ -0.61
PKP4-210ENST00000480171 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
PKP4-210ENST00000480171 MYOM2P54296 1465 aa11.26□□□□□ -0.61
PKP4-210ENST00000480171 KIF3BO15066 747 aa11.25□□□□□ -0.61
PKP4-210ENST00000480171 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
PKP4-210ENST00000480171 VWDEQ8N2E2 1590 aa11.25□□□□□ -0.61
PKP4-210ENST00000480171 MAP3K4Q9Y6R4 1608 aa11.24□□□□□ -0.61
PKP4-210ENST00000480171 NINLQ9Y2I6 1382 aa11.24□□□□□ -0.61
PKP4-210ENST00000480171 CFAP70Q5T0N1 1121 aa11.24□□□□□ -0.61
PKP4-210ENST00000480171 ANO8Q9HCE9 1232 aaPredicted RBP11.24□□□□□ -0.61
PKP4-210ENST00000480171 ERVK-7P63135 1459 aa11.24□□□□□ -0.61
PKP4-210ENST00000480171 CGNL1Q0VF96 1302 aa11.23□□□□□ -0.61
PKP4-210ENST00000480171 C8orf34Q49A92 452 aa11.23□□□□□ -0.61
PKP4-210ENST00000480171 INO80Q9ULG1 1556 aaPredicted RBP11.23□□□□□ -0.61
PKP4-210ENST00000480171 BRD2P25440 801 aaKnown RBP11.23□□□□□ -0.61
PKP4-210ENST00000480171 RGS3P49796 1198 aa11.23□□□□□ -0.61
PKP4-210ENST00000480171 KIF1BO60333 1816 aa11.23□□□□□ -0.61
PKP4-210ENST00000480171 PDE3AQ14432 1141 aa11.22□□□□□ -0.61
PKP4-210ENST00000480171 ABCA6Q8N139 1617 aa11.22□□□□□ -0.61
PKP4-210ENST00000480171 CDK11BP21127 795 aaKnown RBP11.22□□□□□ -0.61
PKP4-210ENST00000480171 CANXP27824 592 aaKnown RBP11.22□□□□□ -0.61
PKP4-210ENST00000480171 TAF7LQ5H9L4 462 aa11.22□□□□□ -0.61
PKP4-210ENST00000480171 FANCAO15360 1455 aa11.22□□□□□ -0.61
PKP4-210ENST00000480171 POLR3AO14802 1390 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms