RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 AK7Q96M32 723 aa11.04□□□□□ -0.64
PBRM1-220ENST00000480064 KCNC4Q03721 635 aa11.03□□□□□ -0.64
PBRM1-220ENST00000480064 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.65
PBRM1-220ENST00000480064 TTC13Q8NBP0 860 aa11.02□□□□□ -0.65
PBRM1-220ENST00000480064 PADI6Q6TGC4 694 aa11.01□□□□□ -0.65
PBRM1-220ENST00000480064 HDGFP51858 240 aaKnown RBP11□□□□□ -0.65
PBRM1-220ENST00000480064 GPIHBP1Q8IV16 184 aa11□□□□□ -0.65
PBRM1-220ENST00000480064 GPBP1L1Q9HC44 474 aaPredicted RBP11□□□□□ -0.65
PBRM1-220ENST00000480064 IL27Q8NEV9 243 aa10.98□□□□□ -0.65
PBRM1-220ENST00000480064 ARID3AQ99856 593 aa10.98□□□□□ -0.65
PBRM1-220ENST00000480064 TRIM26Q12899 539 aaPredicted RBP10.96□□□□□ -0.65
PBRM1-220ENST00000480064 RNF40O75150 1001 aa10.95□□□□□ -0.66
PBRM1-220ENST00000480064 KDM4CQ9H3R0 1056 aa10.95□□□□□ -0.66
PBRM1-220ENST00000480064 PTGDRQ13258 359 aa10.93□□□□□ -0.66
PBRM1-220ENST00000480064 SWT1Q5T5J6 900 aaKnown RBP10.93□□□□□ -0.66
PBRM1-220ENST00000480064 TJAP1Q5JTD0 557 aa10.92□□□□□ -0.66
PBRM1-220ENST00000480064 NPM2Q86SE8 214 aaKnown RBP10.92□□□□□ -0.66
PBRM1-220ENST00000480064 EYA1Q99502 592 aa10.92□□□□□ -0.66
PBRM1-220ENST00000480064 IRX2Q9BZI1 471 aaPredicted RBP10.91□□□□□ -0.66
PBRM1-220ENST00000480064 NUTM2FA1L443 756 aa10.9□□□□□ -0.66
PBRM1-220ENST00000480064 SLF2Q8IX21 1173 aa10.9□□□□□ -0.66
PBRM1-220ENST00000480064 NECTIN2Q92692 538 aa10.9□□□□□ -0.66
PBRM1-220ENST00000480064 MTRQ99707 1265 aa10.89□□□□□ -0.67
PBRM1-220ENST00000480064 IL21Q9HBE4 155 aa10.89□□□□□ -0.67
PBRM1-220ENST00000480064 APLP1P51693 650 aa10.88□□□□□ -0.67
PBRM1-220ENST00000480064 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
PBRM1-220ENST00000480064 PDE4DQ08499 809 aa10.87□□□□□ -0.67
PBRM1-220ENST00000480064 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
PBRM1-220ENST00000480064 RBM46Q8TBY0 533 aaKnown RBP10.85□□□□□ -0.67
PBRM1-220ENST00000480064 TRIM66O15016 1216 aa10.84□□□□□ -0.67
PBRM1-220ENST00000480064 FCHSD2O94868 740 aa10.84□□□□□ -0.67
PBRM1-220ENST00000480064 ZNF516Q92618 1163 aa10.84□□□□□ -0.67
PBRM1-220ENST00000480064 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
PBRM1-220ENST00000480064 DNAJB2P25686 324 aa10.83□□□□□ -0.68
PBRM1-220ENST00000480064 ZBTB7CA1YPR0 619 aa10.82□□□□□ -0.68
PBRM1-220ENST00000480064 FLIIQ13045 1269 aa10.81□□□□□ -0.68
PBRM1-220ENST00000480064 COPS2P61201 443 aa10.8□□□□□ -0.68
PBRM1-220ENST00000480064 FAM161AQ3B820 660 aa10.8□□□□□ -0.68
PBRM1-220ENST00000480064 RCCD1A6NED2 376 aa10.79□□□□□ -0.68
PBRM1-220ENST00000480064 APBB1O00213 710 aa10.79□□□□□ -0.68
PBRM1-220ENST00000480064 PDIA4P13667 645 aaKnown RBP10.79□□□□□ -0.68
PBRM1-220ENST00000480064 PPP1R18Q6NYC8 613 aa10.79□□□□□ -0.68
PBRM1-220ENST00000480064 DDRGK1Q96HY6 314 aa10.79□□□□□ -0.68
PBRM1-220ENST00000480064 PRR14Q9BWN1 585 aa10.79□□□□□ -0.68
PBRM1-220ENST00000480064 TMEM134Q9H6X4 195 aa10.79□□□□□ -0.68
PBRM1-220ENST00000480064 ARID3CA6NKF2 412 aa10.77□□□□□ -0.69
PBRM1-220ENST00000480064 HRCP23327 699 aa10.77□□□□□ -0.69
PBRM1-220ENST00000480064 NKX2-3Q8TAU0 364 aa10.77□□□□□ -0.69
PBRM1-220ENST00000480064 CCDC9Q9Y3X0 531 aaKnown RBP10.77□□□□□ -0.69
PBRM1-220ENST00000480064 C1orf115Q9H7X2 142 aa10.76□□□□□ -0.69
PBRM1-220ENST00000480064 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.76□□□□□ -0.69
PBRM1-220ENST00000480064 HIC1Q14526 733 aa10.75□□□□□ -0.69
PBRM1-220ENST00000480064 PCDHB3Q9Y5E6 796 aa10.75□□□□□ -0.69
PBRM1-220ENST00000480064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.74□□□□□ -0.69
PBRM1-220ENST00000480064 ZPR1O75312 459 aa10.74□□□□□ -0.69
PBRM1-220ENST00000480064 OATP04181 439 aa10.74□□□□□ -0.69
PBRM1-220ENST00000480064 PRKD2Q9BZL6 878 aa10.74□□□□□ -0.69
PBRM1-220ENST00000480064 FAM117AQ9C073 453 aa10.74□□□□□ -0.69
PBRM1-220ENST00000480064 PXYLP1Q8TE99 480 aa10.73□□□□□ -0.69
PBRM1-220ENST00000480064 KMT5BQ4FZB7 885 aa10.72□□□□□ -0.69
PBRM1-220ENST00000480064 GGCXP38435 758 aa10.71□□□□□ -0.69
PBRM1-220ENST00000480064 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.69
PBRM1-220ENST00000480064 ACTN4O43707 911 aaKnown RBP10.7□□□□□ -0.7
PBRM1-220ENST00000480064 GNPATO15228 680 aa10.69□□□□□ -0.7
PBRM1-220ENST00000480064 CFHP08603 1231 aa10.69□□□□□ -0.7
PBRM1-220ENST00000480064 SLC10A3P09131 477 aa10.69□□□□□ -0.7
PBRM1-220ENST00000480064 Q6ZNB5 142 aa10.69□□□□□ -0.7
PBRM1-220ENST00000480064 V9GY48 417 aaPredicted RBP10.69□□□□□ -0.7
PBRM1-220ENST00000480064 MINK1Q8N4C8 1332 aaPredicted RBP10.68□□□□□ -0.7
PBRM1-220ENST00000480064 FECHP22830 423 aa10.68□□□□□ -0.7
PBRM1-220ENST00000480064 LAPTM4AQ15012 233 aa10.68□□□□□ -0.7
PBRM1-220ENST00000480064 METTL3Q86U44 580 aaKnown RBP10.68□□□□□ -0.7
PBRM1-220ENST00000480064 TMUB1Q9BVT8 246 aa10.68□□□□□ -0.7
PBRM1-220ENST00000480064 GPR37O15354 613 aa10.66□□□□□ -0.7
PBRM1-220ENST00000480064 GFRA3O60609 400 aa10.66□□□□□ -0.7
PBRM1-220ENST00000480064 CCDC102AQ96A19 550 aa10.66□□□□□ -0.7
PBRM1-220ENST00000480064 MAP2K5Q13163 448 aa10.65□□□□□ -0.7
PBRM1-220ENST00000480064 CCDC82Q8N4S0 544 aa10.65□□□□□ -0.7
PBRM1-220ENST00000480064 RSPH4AQ5TD94 716 aa10.64□□□□□ -0.71
PBRM1-220ENST00000480064 PLEKHG3A1L390 1219 aa10.63□□□□□ -0.71
PBRM1-220ENST00000480064 TLL1O43897 1013 aa10.63□□□□□ -0.71
PBRM1-220ENST00000480064 AMHR2Q16671 573 aa10.63□□□□□ -0.71
PBRM1-220ENST00000480064 TTLL12Q14166 644 aaPredicted RBP10.62□□□□□ -0.71
PBRM1-220ENST00000480064 A6NJR5 290 aa10.61□□□□□ -0.71
PBRM1-220ENST00000480064 NR1I2O75469 434 aa10.61□□□□□ -0.71
PBRM1-220ENST00000480064 PARP9Q8IXQ6 854 aa10.61□□□□□ -0.71
PBRM1-220ENST00000480064 PCMTD1Q96MG8 357 aaPredicted RBP10.61□□□□□ -0.71
PBRM1-220ENST00000480064 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
PBRM1-220ENST00000480064 GOPCQ9HD26 462 aa10.6□□□□□ -0.71
PBRM1-220ENST00000480064 NRG2O14511 850 aaPredicted RBP10.59□□□□□ -0.71
PBRM1-220ENST00000480064 TRAK2O60296 914 aa10.59□□□□□ -0.71
PBRM1-220ENST00000480064 S1PR4O95977 384 aa10.57□□□□□ -0.72
PBRM1-220ENST00000480064 ADH1BP00325 375 aa10.57□□□□□ -0.72
PBRM1-220ENST00000480064 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
PBRM1-220ENST00000480064 SCUBE3Q8IX30 993 aa10.57□□□□□ -0.72
PBRM1-220ENST00000480064 RDH13Q8NBN7 331 aa10.57□□□□□ -0.72
PBRM1-220ENST00000480064 NLRP7Q8WX94 980 aa10.57□□□□□ -0.72
PBRM1-220ENST00000480064 CLUAP1Q96AJ1 413 aa10.57□□□□□ -0.72
PBRM1-220ENST00000480064 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
PBRM1-220ENST00000480064 IRF6O14896 467 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms