RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 TNRQ92752 1358 aa8.51□□□□□ -1.05
CAPN9-204ENST00000480004 CHRDL2Q6WN34 429 aa8.51□□□□□ -1.05
CAPN9-204ENST00000480004 ZNF777Q9ULD5 760 aaPredicted RBP8.51□□□□□ -1.05
CAPN9-204ENST00000480004 SAMD9LQ8IVG5 1584 aa8.51□□□□□ -1.05
CAPN9-204ENST00000480004 NEURL4Q96JN8 1562 aa8.51□□□□□ -1.05
CAPN9-204ENST00000480004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.5□□□□□ -1.05
CAPN9-204ENST00000480004 PAK3O75914 559 aaPredicted RBP8.5□□□□□ -1.05
CAPN9-204ENST00000480004 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
CAPN9-204ENST00000480004 PCDHB13Q9Y5F0 798 aa8.5□□□□□ -1.05
CAPN9-204ENST00000480004 RNF17Q9BXT8 1623 aaKnown RBP8.5□□□□□ -1.05
CAPN9-204ENST00000480004 LRRC7Q96NW7 1537 aa8.49□□□□□ -1.05
CAPN9-204ENST00000480004 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
CAPN9-204ENST00000480004 HNRNPMP52272 730 aaKnown RBP eCLIP8.49□□□□□ -1.05
CAPN9-204ENST00000480004 DEPDC5O75140 1603 aa8.49□□□□□ -1.05
CAPN9-204ENST00000480004 ATP7AQ04656 1500 aa8.49□□□□□ -1.05
CAPN9-204ENST00000480004 SYNMO15061 1565 aa8.48□□□□□ -1.05
CAPN9-204ENST00000480004 PLXNC1O60486 1568 aa8.48□□□□□ -1.05
CAPN9-204ENST00000480004 FAM135BQ49AJ0 1406 aa8.48□□□□□ -1.05
CAPN9-204ENST00000480004 KIAA1107Q9UPP5 1409 aa8.48□□□□□ -1.05
CAPN9-204ENST00000480004 PIP4P2Q8N4L2 257 aa8.48□□□□□ -1.05
CAPN9-204ENST00000480004 PLEKHH2Q8IVE3 1493 aa8.48□□□□□ -1.05
CAPN9-204ENST00000480004 NLRP1Q9C000 1473 aa8.48□□□□□ -1.05
CAPN9-204ENST00000480004 PRKCSHP14314 528 aaPredicted RBP8.47□□□□□ -1.05
CAPN9-204ENST00000480004 PSEN1P49768 467 aa8.47□□□□□ -1.05
CAPN9-204ENST00000480004 NBR1Q14596 966 aa8.47□□□□□ -1.05
CAPN9-204ENST00000480004 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
CAPN9-204ENST00000480004 UPF1Q92900 1129 aaKnown RBP eCLIP8.47□□□□□ -1.05
CAPN9-204ENST00000480004 UGGT1Q9NYU2 1555 aa8.47□□□□□ -1.05
CAPN9-204ENST00000480004 MIA2Q96PC5 1412 aa8.46□□□□□ -1.05
CAPN9-204ENST00000480004 UBTFP17480 764 aaKnown RBP8.46□□□□□ -1.06
CAPN9-204ENST00000480004 CFDP1Q9UEE9 299 aaPredicted RBP8.46□□□□□ -1.06
CAPN9-204ENST00000480004 WASHC2CQ9Y4E1 1318 aa8.46□□□□□ -1.06
CAPN9-204ENST00000480004 IQGAP1P46940 1657 aa8.46□□□□□ -1.06
CAPN9-204ENST00000480004 PZPP20742 1482 aa8.45□□□□□ -1.06
CAPN9-204ENST00000480004 CCDC18Q5T9S5 1454 aa8.45□□□□□ -1.06
CAPN9-204ENST00000480004 SYCP2Q9BX26 1530 aa8.45□□□□□ -1.06
CAPN9-204ENST00000480004 ADGBQ8N7X0 1667 aa8.45□□□□□ -1.06
CAPN9-204ENST00000480004 CDC42BPAQ5VT25 1732 aa8.44□□□□□ -1.06
CAPN9-204ENST00000480004 TPRNQ4KMQ1 711 aa8.44□□□□□ -1.06
CAPN9-204ENST00000480004 ZNF772Q68DY9 489 aaPredicted RBP8.44□□□□□ -1.06
CAPN9-204ENST00000480004 IFNL1Q8IU54 200 aa8.44□□□□□ -1.06
CAPN9-204ENST00000480004 KIF12Q96FN5 646 aa8.44□□□□□ -1.06
CAPN9-204ENST00000480004 DHX29Q7Z478 1369 aaKnown RBP8.44□□□□□ -1.06
CAPN9-204ENST00000480004 INO80Q9ULG1 1556 aaPredicted RBP8.44□□□□□ -1.06
CAPN9-204ENST00000480004 KIF3BO15066 747 aa8.43□□□□□ -1.06
CAPN9-204ENST00000480004 MAP3K13O43283 966 aa8.43□□□□□ -1.06
CAPN9-204ENST00000480004 RTEL1-TNFRSF6BF6WH68 1400 aa8.43□□□□□ -1.06
CAPN9-204ENST00000480004 ARHGAP35Q9NRY4 1499 aa8.43□□□□□ -1.06
CAPN9-204ENST00000480004 MFRPQ9BY79 579 aa8.42□□□□□ -1.06
CAPN9-204ENST00000480004 KDM5DQ9BY66 1539 aa8.42□□□□□ -1.06
CAPN9-204ENST00000480004 GPATCH8Q9UKJ3 1502 aaKnown RBP8.42□□□□□ -1.06
CAPN9-204ENST00000480004 STRCP1A6NGW2 1772 aa8.41□□□□□ -1.06
CAPN9-204ENST00000480004 JCADQ9P266 1359 aa8.41□□□□□ -1.06
CAPN9-204ENST00000480004 SETD1AO15047 1707 aaKnown RBP8.4□□□□□ -1.06
CAPN9-204ENST00000480004 CASKIN1Q8WXD9 1431 aa8.4□□□□□ -1.06
CAPN9-204ENST00000480004 CCNB3Q8WWL7 1395 aa8.4□□□□□ -1.06
CAPN9-204ENST00000480004 RXRBP28702 533 aa8.4□□□□□ -1.06
CAPN9-204ENST00000480004 RSPH4AQ5TD94 716 aa8.4□□□□□ -1.06
CAPN9-204ENST00000480004 MEX3CQ5U5Q3 659 aaKnown RBP8.4□□□□□ -1.06
CAPN9-204ENST00000480004 TRIM52Q96A61 297 aa8.4□□□□□ -1.06
CAPN9-204ENST00000480004 EID1Q9Y6B2 187 aa8.4□□□□□ -1.06
CAPN9-204ENST00000480004 LRRC9Q6ZRR7 1453 aa8.39□□□□□ -1.07
CAPN9-204ENST00000480004 SPATA31A6Q5VVP1 1343 aa8.39□□□□□ -1.07
CAPN9-204ENST00000480004 TXNDC2Q86VQ3 553 aa8.39□□□□□ -1.07
CAPN9-204ENST00000480004 LRRIQ1Q96JM4 1722 aa8.39□□□□□ -1.07
CAPN9-204ENST00000480004 SCAF11Q99590 1463 aaKnown RBP8.38□□□□□ -1.07
CAPN9-204ENST00000480004 SOX12O15370 315 aa8.37□□□□□ -1.07
CAPN9-204ENST00000480004 CD44P16070 742 aaKnown RBP8.37□□□□□ -1.07
CAPN9-204ENST00000480004 KCNA6P17658 529 aa8.37□□□□□ -1.07
CAPN9-204ENST00000480004 CADPS2Q86UW7 1296 aa8.37□□□□□ -1.07
CAPN9-204ENST00000480004 PROSER2Q86WR7 435 aaPredicted RBP8.37□□□□□ -1.07
CAPN9-204ENST00000480004 ZRANB1Q9UGI0 708 aa8.37□□□□□ -1.07
CAPN9-204ENST00000480004 ROBO1Q9Y6N7 1651 aa8.37□□□□□ -1.07
CAPN9-204ENST00000480004 TMEM94Q12767 1356 aa8.36□□□□□ -1.07
CAPN9-204ENST00000480004 FBXO22Q8NEZ5 403 aa8.36□□□□□ -1.07
CAPN9-204ENST00000480004 CABP2Q9NPB3 220 aa8.36□□□□□ -1.07
CAPN9-204ENST00000480004 SLAIN2Q9P270 581 aa8.36□□□□□ -1.07
CAPN9-204ENST00000480004 CDK12Q9NYV4 1490 aaPredicted RBP8.36□□□□□ -1.07
CAPN9-204ENST00000480004 ZC3H13Q5T200 1668 aaKnown RBP8.36□□□□□ -1.07
CAPN9-204ENST00000480004 MSH6P52701 1360 aa8.35□□□□□ -1.07
CAPN9-204ENST00000480004 LTKP29376 864 aa8.35□□□□□ -1.07
CAPN9-204ENST00000480004 NLRP6P59044 892 aa8.35□□□□□ -1.07
CAPN9-204ENST00000480004 EFCAB3Q8N7B9 438 aa8.35□□□□□ -1.07
CAPN9-204ENST00000480004 XIRP1Q702N8 1843 aaKnown RBP8.35□□□□□ -1.07
CAPN9-204ENST00000480004 FGD6Q6ZV73 1430 aa8.35□□□□□ -1.07
CAPN9-204ENST00000480004 MBD5Q9P267 1494 aa8.34□□□□□ -1.07
CAPN9-204ENST00000480004 TSPY4P0CV99 314 aa8.34□□□□□ -1.07
CAPN9-204ENST00000480004 TSPY10P0CW01 314 aa8.34□□□□□ -1.07
CAPN9-204ENST00000480004 FYCO1Q9BQS8 1478 aa8.33□□□□□ -1.08
CAPN9-204ENST00000480004 PHLPP1O60346 1717 aa8.33□□□□□ -1.08
CAPN9-204ENST00000480004 PHF12Q96QT6 1004 aa8.33□□□□□ -1.08
CAPN9-204ENST00000480004 SLIT1O75093 1534 aa8.33□□□□□ -1.08
CAPN9-204ENST00000480004 MTUS2Q5JR59 1369 aa8.33□□□□□ -1.08
CAPN9-204ENST00000480004 ARHGAP23Q9P227 1491 aa8.32□□□□□ -1.08
CAPN9-204ENST00000480004 ZNF644Q9H582 1327 aaPredicted RBP8.32□□□□□ -1.08
CAPN9-204ENST00000480004 WDR70Q9NW82 654 aa8.32□□□□□ -1.08
CAPN9-204ENST00000480004 ERVK-7P63135 1459 aa8.32□□□□□ -1.08
CAPN9-204ENST00000480004 PPP1R37O75864 691 aa8.31□□□□□ -1.08
CAPN9-204ENST00000480004 PHF8Q9UPP1 1060 aa8.31□□□□□ -1.08
CAPN9-204ENST00000480004 UBR1Q8IWV7 1749 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 363.5 ms