RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 PRSS12P56730 875 aa12.65□□□□□ -0.38
GAPVD1-217ENST00000479511 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-217ENST00000479511 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-217ENST00000479511 GLMNQ92990 594 aa12.65□□□□□ -0.38
GAPVD1-217ENST00000479511 GZF1Q9H116 711 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-217ENST00000479511 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.38
GAPVD1-217ENST00000479511 TBC1D2BQ9UPU7 963 aa12.65□□□□□ -0.38
GAPVD1-217ENST00000479511 PPP1R15AO75807 674 aaPredicted RBP12.64□□□□□ -0.39
GAPVD1-217ENST00000479511 CD46P15529 392 aa12.64□□□□□ -0.39
GAPVD1-217ENST00000479511 QPCTQ16769 361 aa12.64□□□□□ -0.39
GAPVD1-217ENST00000479511 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
GAPVD1-217ENST00000479511 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
GAPVD1-217ENST00000479511 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
GAPVD1-217ENST00000479511 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
GAPVD1-217ENST00000479511 ADAM33Q9BZ11 813 aa12.63□□□□□ -0.39
GAPVD1-217ENST00000479511 RCCD1A6NED2 376 aa12.62□□□□□ -0.39
GAPVD1-217ENST00000479511 MOXD2PA6NHM9 499 aa12.62□□□□□ -0.39
GAPVD1-217ENST00000479511 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
GAPVD1-217ENST00000479511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-217ENST00000479511 RTL5Q5HYW3 569 aaPredicted RBP12.61□□□□□ -0.39
GAPVD1-217ENST00000479511 PCDHB15Q9Y5E8 787 aa12.61□□□□□ -0.39
GAPVD1-217ENST00000479511 SOCS7O14512 581 aa12.6□□□□□ -0.39
GAPVD1-217ENST00000479511 LILRB3O75022 631 aa12.6□□□□□ -0.39
GAPVD1-217ENST00000479511 AP1G2O75843 785 aa12.6□□□□□ -0.39
GAPVD1-217ENST00000479511 NDUFV2P19404 249 aa12.6□□□□□ -0.39
GAPVD1-217ENST00000479511 TMCO4Q5TGY1 634 aa12.6□□□□□ -0.39
GAPVD1-217ENST00000479511 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
GAPVD1-217ENST00000479511 EYA1Q99502 592 aa12.6□□□□□ -0.39
GAPVD1-217ENST00000479511 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
GAPVD1-217ENST00000479511 NUTM1Q86Y26 1132 aa12.58□□□□□ -0.4
GAPVD1-217ENST00000479511 C3orf80F5H4A9 247 aa12.57□□□□□ -0.4
GAPVD1-217ENST00000479511 ZNF710Q8N1W2 664 aa12.57□□□□□ -0.4
GAPVD1-217ENST00000479511 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
GAPVD1-217ENST00000479511 ACIN1Q9UKV3 1341 aaKnown RBP12.57□□□□□ -0.4
GAPVD1-217ENST00000479511 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
GAPVD1-217ENST00000479511 MFAP1P55081 439 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-217ENST00000479511 ADAMTS19Q8TE59 1207 aa12.56□□□□□ -0.4
GAPVD1-217ENST00000479511 POTEMA6NI47 508 aa12.55□□□□□ -0.4
GAPVD1-217ENST00000479511 DDX11L8A8MPP1 907 aa12.55□□□□□ -0.4
GAPVD1-217ENST00000479511 CABLES1Q8TDN4 633 aa12.55□□□□□ -0.4
GAPVD1-217ENST00000479511 KHSRPQ92945 711 aaKnown RBP eCLIP12.54□□□□□ -0.4
GAPVD1-217ENST00000479511 GJD4Q96KN9 370 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-217ENST00000479511 PRM3Q9NNZ6 103 aa12.54□□□□□ -0.4
GAPVD1-217ENST00000479511 COL9A1P20849 921 aa12.53□□□□□ -0.4
GAPVD1-217ENST00000479511 GJA5P36382 358 aa12.53□□□□□ -0.4
GAPVD1-217ENST00000479511 NUDT7P0C024 238 aa12.52□□□□□ -0.41
GAPVD1-217ENST00000479511 HDGFL1Q5TGJ6 251 aa12.52□□□□□ -0.41
GAPVD1-217ENST00000479511 POTEGQ6S5H5 508 aa12.52□□□□□ -0.41
GAPVD1-217ENST00000479511 SULF1Q8IWU6 871 aa12.51□□□□□ -0.41
GAPVD1-217ENST00000479511 PBXIP1Q96AQ6 731 aa12.51□□□□□ -0.41
GAPVD1-217ENST00000479511 TSKSQ9UJT2 592 aa12.51□□□□□ -0.41
GAPVD1-217ENST00000479511 NUTM2BA6NNL0 878 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-217ENST00000479511 NUTM2EB1AL46 878 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-217ENST00000479511 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-217ENST00000479511 FOXD4L5Q5VV16 416 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-217ENST00000479511 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-217ENST00000479511 FOXD4L4Q8WXT5 416 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-217ENST00000479511 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.5□□□□□ -0.41
GAPVD1-217ENST00000479511 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.49□□□□□ -0.41
GAPVD1-217ENST00000479511 GPR37L1O60883 481 aa12.49□□□□□ -0.41
GAPVD1-217ENST00000479511 RFX1P22670 979 aa12.49□□□□□ -0.41
GAPVD1-217ENST00000479511 CFAP70Q5T0N1 1121 aa12.49□□□□□ -0.41
GAPVD1-217ENST00000479511 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
GAPVD1-217ENST00000479511 DNAJB2P25686 324 aa12.48□□□□□ -0.41
GAPVD1-217ENST00000479511 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
GAPVD1-217ENST00000479511 PDE4CQ08493 712 aa12.47□□□□□ -0.41
GAPVD1-217ENST00000479511 ARSIQ5FYB1 569 aa12.47□□□□□ -0.41
GAPVD1-217ENST00000479511 ZNF428Q96B54 188 aa12.47□□□□□ -0.41
GAPVD1-217ENST00000479511 NDUFB9Q9Y6M9 179 aa12.47□□□□□ -0.41
GAPVD1-217ENST00000479511 PRPF38BQ5VTL8 546 aaKnown RBP12.46□□□□□ -0.41
GAPVD1-217ENST00000479511 TMEM134Q9H6X4 195 aa12.46□□□□□ -0.41
GAPVD1-217ENST00000479511 HMX1Q9NP08 348 aaPredicted RBP12.46□□□□□ -0.41
GAPVD1-217ENST00000479511 CARNS1A5YM72 827 aa12.45□□□□□ -0.42
GAPVD1-217ENST00000479511 LCE2DQ5TA82 110 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-217ENST00000479511 TRIM34Q9BYJ4 488 aa12.45□□□□□ -0.42
GAPVD1-217ENST00000479511 KDM4AO75164 1064 aa12.43□□□□□ -0.42
GAPVD1-217ENST00000479511 PNMA3Q9UL41 463 aa12.43□□□□□ -0.42
GAPVD1-217ENST00000479511 BRD1O95696 1058 aa12.42□□□□□ -0.42
GAPVD1-217ENST00000479511 CTDSPL2Q05D32 466 aa12.42□□□□□ -0.42
GAPVD1-217ENST00000479511 KCNA1Q09470 495 aa12.42□□□□□ -0.42
GAPVD1-217ENST00000479511 RDH13Q8NBN7 331 aa12.42□□□□□ -0.42
GAPVD1-217ENST00000479511 TATDN2Q93075 761 aa12.42□□□□□ -0.42
GAPVD1-217ENST00000479511 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
GAPVD1-217ENST00000479511 PCDHGC3Q9UN70 934 aa12.42□□□□□ -0.42
GAPVD1-217ENST00000479511 USTQ9Y2C2 406 aa12.42□□□□□ -0.42
GAPVD1-217ENST00000479511 VAC14Q08AM6 782 aa12.41□□□□□ -0.42
GAPVD1-217ENST00000479511 WASHC4Q2M389 1173 aa12.41□□□□□ -0.42
GAPVD1-217ENST00000479511 PPP1R12CQ9BZL4 782 aa12.41□□□□□ -0.42
GAPVD1-217ENST00000479511 HOXA2O43364 376 aa12.4□□□□□ -0.42
GAPVD1-217ENST00000479511 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
GAPVD1-217ENST00000479511 NBPF26B4DH59 902 aa12.39□□□□□ -0.43
GAPVD1-217ENST00000479511 CSB-PGBD3P0DP91 1061 aa12.39□□□□□ -0.43
GAPVD1-217ENST00000479511 FDX1P10109 184 aa12.39□□□□□ -0.43
GAPVD1-217ENST00000479511 RBM25P49756 843 aaKnown RBP12.39□□□□□ -0.43
GAPVD1-217ENST00000479511 GUCA2AQ02747 115 aa12.39□□□□□ -0.43
GAPVD1-217ENST00000479511 HLA-CQ95604 372 aa12.39□□□□□ -0.43
GAPVD1-217ENST00000479511 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
GAPVD1-217ENST00000479511 SMAPO00193 183 aa12.38□□□□□ -0.43
GAPVD1-217ENST00000479511 ALG2Q9H553 416 aa12.38□□□□□ -0.43
GAPVD1-217ENST00000479511 LHX6Q9UPM6 363 aa12.38□□□□□ -0.43
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