RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 FANCAO15360 1455 aa32.64■■■□□ 2.82
SYNGAP1-206ENST00000479510 TCERG1O14776 1098 aaKnown RBP32.63■■■□□ 2.81
SYNGAP1-206ENST00000479510 NOP58Q9Y2X3 529 aaKnown RBP32.63■■■□□ 2.81
SYNGAP1-206ENST00000479510 ASXL1Q8IXJ9 1541 aa32.62■■■□□ 2.81
SYNGAP1-206ENST00000479510 MYOM2P54296 1465 aa32.62■■■□□ 2.81
SYNGAP1-206ENST00000479510 AMER1Q5JTC6 1135 aaPredicted RBP32.62■■■□□ 2.81
SYNGAP1-206ENST00000479510 ANP32AP39687 249 aaKnown RBP32.61■■■□□ 2.81
SYNGAP1-206ENST00000479510 PIK3C2GO75747 1445 aa32.61■■■□□ 2.81
SYNGAP1-206ENST00000479510 CDCA7LQ96GN5 454 aa32.6■■■□□ 2.81
SYNGAP1-206ENST00000479510 SALL2Q9Y467 1007 aaPredicted RBP32.6■■■□□ 2.81
SYNGAP1-206ENST00000479510 PPP2R1AP30153 589 aa32.59■■■□□ 2.81
SYNGAP1-206ENST00000479510 MS4A1P11836 297 aa32.56■■■□□ 2.8
SYNGAP1-206ENST00000479510 MYOM1P52179 1685 aa32.55■■■□□ 2.8
SYNGAP1-206ENST00000479510 MROH1Q8NDA8 1641 aa32.55■■■□□ 2.8
SYNGAP1-206ENST00000479510 ADGRL1O94910 1474 aa32.54■■■□□ 2.8
SYNGAP1-206ENST00000479510 IPO9Q96P70 1041 aaKnown RBP32.54■■■□□ 2.8
SYNGAP1-206ENST00000479510 ADAMTS8Q9UP79 889 aa32.54■■■□□ 2.8
SYNGAP1-206ENST00000479510 KDM5AP29375 1690 aaKnown RBP32.53■■■□□ 2.8
SYNGAP1-206ENST00000479510 MAP3K4Q9Y6R4 1608 aa32.53■■■□□ 2.8
SYNGAP1-206ENST00000479510 WDR43Q15061 677 aaKnown RBP eCLIP32.52■■■□□ 2.89e-6■■■□□ 15.6
SYNGAP1-206ENST00000479510 EFCAB6Q5THR3 1501 aa32.5■■■□□ 2.79
SYNGAP1-206ENST00000479510 LMTK2Q8IWU2 1503 aa32.49■■■□□ 2.79
SYNGAP1-206ENST00000479510 KIF3BO15066 747 aa32.49■■■□□ 2.79
SYNGAP1-206ENST00000479510 ZNF521Q96K83 1311 aa32.47■■■□□ 2.79
SYNGAP1-206ENST00000479510 KIF1BO60333 1816 aa32.46■■■□□ 2.79
SYNGAP1-206ENST00000479510 NRXN1Q9ULB1 1477 aa32.45■■■□□ 2.79
SYNGAP1-206ENST00000479510 IFT172Q9UG01 1749 aa32.45■■■□□ 2.79
SYNGAP1-206ENST00000479510 ABCA6Q8N139 1617 aa32.45■■■□□ 2.78
SYNGAP1-206ENST00000479510 SBNO2Q9Y2G9 1366 aa32.44■■■□□ 2.78
SYNGAP1-206ENST00000479510 MYO3AQ8NEV4 1616 aa32.42■■■□□ 2.78
SYNGAP1-206ENST00000479510 PLEKHH1Q9ULM0 1364 aa32.41■■■□□ 2.78
SYNGAP1-206ENST00000479510 ERVK-7P63135 1459 aa32.4■■■□□ 2.78
SYNGAP1-206ENST00000479510 NGEFQ8N5V2 710 aa32.39■■■□□ 2.78
SYNGAP1-206ENST00000479510 DUSP27Q5VZP5 1158 aa32.39■■■□□ 2.78
SYNGAP1-206ENST00000479510 GOLGA2Q08379 1002 aa32.38■■■□□ 2.77
SYNGAP1-206ENST00000479510 KIDINS220Q9ULH0 1771 aa32.38■■■□□ 2.77
SYNGAP1-206ENST00000479510 ASXL2Q76L83 1435 aa32.38■■■□□ 2.77
SYNGAP1-206ENST00000479510 CRBNQ96SW2 442 aa32.38■■■□□ 2.77
SYNGAP1-206ENST00000479510 ZBTB47Q9UFB7 747 aaPredicted RBP32.38■■■□□ 2.77
SYNGAP1-206ENST00000479510 ZNF518AQ6AHZ1 1483 aa32.37■■■□□ 2.77
SYNGAP1-206ENST00000479510 SETBP1Q9Y6X0 1596 aa32.37■■■□□ 2.77
SYNGAP1-206ENST00000479510 PPRC1Q5VV67 1664 aaKnown RBP32.36■■■□□ 2.77
SYNGAP1-206ENST00000479510 PAK3O75914 559 aaPredicted RBP32.36■■■□□ 2.77
SYNGAP1-206ENST00000479510 PDE4AP27815 886 aa32.36■■■□□ 2.77
SYNGAP1-206ENST00000479510 BACH2Q9BYV9 841 aa32.35■■■□□ 2.77
SYNGAP1-206ENST00000479510 PLIN1O60240 522 aa32.35■■■□□ 2.77
SYNGAP1-206ENST00000479510 CFAP70Q5T0N1 1121 aa32.33■■■□□ 2.77
SYNGAP1-206ENST00000479510 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.33■■■□□ 2.77
SYNGAP1-206ENST00000479510 UGGT1Q9NYU2 1555 aa32.33■■■□□ 2.77
SYNGAP1-206ENST00000479510 ADGRB3O60242 1522 aa32.33■■■□□ 2.77
SYNGAP1-206ENST00000479510 ADGRF5Q8IZF2 1346 aa32.32■■■□□ 2.76
SYNGAP1-206ENST00000479510 TRMT2AQ8IZ69 625 aaKnown RBP32.31■■■□□ 2.76
SYNGAP1-206ENST00000479510 CFAP74Q9C0B2 1584 aa32.3■■■□□ 2.76
SYNGAP1-206ENST00000479510 SLFN5Q08AF3 891 aa32.3■■■□□ 2.76
SYNGAP1-206ENST00000479510 MROH2AA6NES4 1674 aa32.29■■■□□ 2.76
SYNGAP1-206ENST00000479510 KDM2BQ8NHM5 1336 aa32.25■■■□□ 2.75
SYNGAP1-206ENST00000479510 CENPQQ7L2Z9 268 aaPredicted RBP32.23■■■□□ 2.75
SYNGAP1-206ENST00000479510 MLH3Q9UHC1 1453 aa32.23■■■□□ 2.75
SYNGAP1-206ENST00000479510 POLR3AO14802 1390 aaPredicted RBP32.22■■■□□ 2.75
SYNGAP1-206ENST00000479510 NKTRP30414 1462 aaKnown RBP32.21■■■□□ 2.75
SYNGAP1-206ENST00000479510 CARD14Q9BXL6 1004 aa32.2■■■□□ 2.75
SYNGAP1-206ENST00000479510 RPGRIP1LQ68CZ1 1315 aa32.2■■■□□ 2.75
SYNGAP1-206ENST00000479510 CENPJQ9HC77 1338 aaPredicted RBP32.2■■■□□ 2.75
SYNGAP1-206ENST00000479510 C20orf194Q5TEA3 1177 aa32.2■■■□□ 2.74
SYNGAP1-206ENST00000479510 NOS1P29475 1434 aa32.2■■■□□ 2.74
SYNGAP1-206ENST00000479510 POGZQ7Z3K3 1410 aa32.2■■■□□ 2.74
SYNGAP1-206ENST00000479510 E9PSI1 815 aa32.19■■■□□ 2.74
SYNGAP1-206ENST00000479510 BCL11AQ9H165 835 aa32.19■■■□□ 2.74
SYNGAP1-206ENST00000479510 PPLO60437 1756 aa32.18■■■□□ 2.74
SYNGAP1-206ENST00000479510 NPATQ14207 1427 aa32.16■■■□□ 2.74
SYNGAP1-206ENST00000479510 ZC3H13Q5T200 1668 aaKnown RBP32.16■■■□□ 2.74
SYNGAP1-206ENST00000479510 C14orf93Q9H972 538 aaKnown RBP32.15■■■□□ 2.74
SYNGAP1-206ENST00000479510 FRMPD1Q5SYB0 1578 aa32.14■■■□□ 2.74
SYNGAP1-206ENST00000479510 APAF1O14727 1248 aa32.14■■■□□ 2.74
SYNGAP1-206ENST00000479510 ADGRB1O14514 1584 aa32.13■■■□□ 2.73
SYNGAP1-206ENST00000479510 HECW2Q9P2P5 1572 aa32.13■■■□□ 2.73
SYNGAP1-206ENST00000479510 USP32Q8NFA0 1604 aa32.12■■■□□ 2.73
SYNGAP1-206ENST00000479510 PUS7Q96PZ0 661 aaKnown RBP32.12■■■□□ 2.73
SYNGAP1-206ENST00000479510 CCDC146Q8IYE0 955 aa32.11■■■□□ 2.73
SYNGAP1-206ENST00000479510 NPM1P06748 294 aaKnown RBP eCLIP32.11■■■□□ 2.73
SYNGAP1-206ENST00000479510 NINLQ9Y2I6 1382 aa32.1■■■□□ 2.73
SYNGAP1-206ENST00000479510 DEKP35659 375 aaKnown RBP32.09■■■□□ 2.73
SYNGAP1-206ENST00000479510 DDRGK1Q96HY6 314 aa32.09■■■□□ 2.73
SYNGAP1-206ENST00000479510 CD109Q6YHK3 1445 aa32.09■■■□□ 2.73
SYNGAP1-206ENST00000479510 QRICH2Q9H0J4 1663 aa32.09■■■□□ 2.73
SYNGAP1-206ENST00000479510 NPM2Q86SE8 214 aaKnown RBP32.08■■■□□ 2.73
SYNGAP1-206ENST00000479510 ABCC3O15438 1527 aa32.07■■■□□ 2.72
SYNGAP1-206ENST00000479510 NBR1Q14596 966 aa32.07■■■□□ 2.72
SYNGAP1-206ENST00000479510 RTL5Q5HYW3 569 aaPredicted RBP32.06■■■□□ 2.72
SYNGAP1-206ENST00000479510 NSD3Q9BZ95 1437 aa32.05■■■□□ 2.72
SYNGAP1-206ENST00000479510 SPINK5Q9NQ38 1064 aaPredicted RBP32.03■■■□□ 2.72
SYNGAP1-206ENST00000479510 MORC1Q86VD1 984 aa32.01■■■□□ 2.71
SYNGAP1-206ENST00000479510 SHPRHQ149N8 1683 aa32.01■■■□□ 2.71
SYNGAP1-206ENST00000479510 PDE3AQ14432 1141 aa32■■■□□ 2.71
SYNGAP1-206ENST00000479510 NCBP3Q53F19 620 aaKnown RBP32■■■□□ 2.71
SYNGAP1-206ENST00000479510 CHGAP10645 457 aaKnown RBP31.99■■■□□ 2.71
SYNGAP1-206ENST00000479510 NEO1Q92859 1461 aa31.99■■■□□ 2.71
SYNGAP1-206ENST00000479510 USP35Q9P2H5 1018 aa31.99■■■□□ 2.71
SYNGAP1-206ENST00000479510 PIK3C2BO00750 1634 aa31.99■■■□□ 2.71
SYNGAP1-206ENST00000479510 CAMSAP1Q5T5Y3 1602 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms