RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
CMTM1-208ENST00000479381 RRBP1Q9P2E9 1410 aaKnown RBP13.66□□□□□ -0.22
CMTM1-208ENST00000479381 PPP1R15AO75807 674 aaPredicted RBP13.66□□□□□ -0.22
CMTM1-208ENST00000479381 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
CMTM1-208ENST00000479381 TRIM52Q96A61 297 aa13.66□□□□□ -0.22
CMTM1-208ENST00000479381 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
CMTM1-208ENST00000479381 NEURL4Q96JN8 1562 aa13.65□□□□□ -0.22
CMTM1-208ENST00000479381 SCAF11Q99590 1463 aaKnown RBP13.64□□□□□ -0.23
CMTM1-208ENST00000479381 RPRD2Q5VT52 1461 aaKnown RBP13.63□□□□□ -0.23
CMTM1-208ENST00000479381 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
CMTM1-208ENST00000479381 IDI1Q13907 227 aa13.63□□□□□ -0.23
CMTM1-208ENST00000479381 POLA2Q14181 598 aa13.63□□□□□ -0.23
CMTM1-208ENST00000479381 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
CMTM1-208ENST00000479381 SYNMO15061 1565 aa13.62□□□□□ -0.23
CMTM1-208ENST00000479381 IQGAP3Q86VI3 1631 aa13.62□□□□□ -0.23
CMTM1-208ENST00000479381 LTBP4Q8N2S1 1624 aa13.62□□□□□ -0.23
CMTM1-208ENST00000479381 ADGRB3O60242 1522 aa13.61□□□□□ -0.23
CMTM1-208ENST00000479381 E9PCH4 1651 aa13.6□□□□□ -0.23
CMTM1-208ENST00000479381 CPS1P31327 1500 aa13.59□□□□□ -0.23
CMTM1-208ENST00000479381 TMEM2Q9UHN6 1383 aa13.59□□□□□ -0.23
CMTM1-208ENST00000479381 NOS1P29475 1434 aa13.59□□□□□ -0.23
CMTM1-208ENST00000479381 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
CMTM1-208ENST00000479381 LTKP29376 864 aa13.58□□□□□ -0.24
CMTM1-208ENST00000479381 PIP4K2BP78356 416 aa13.58□□□□□ -0.24
CMTM1-208ENST00000479381 ZNF326Q5BKZ1 582 aaKnown RBP13.58□□□□□ -0.24
CMTM1-208ENST00000479381 MED14O60244 1454 aa13.58□□□□□ -0.24
CMTM1-208ENST00000479381 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.24
CMTM1-208ENST00000479381 SLIT1O75093 1534 aa13.58□□□□□ -0.24
CMTM1-208ENST00000479381 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
CMTM1-208ENST00000479381 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
CMTM1-208ENST00000479381 NAIPQ13075 1403 aa13.56□□□□□ -0.24
CMTM1-208ENST00000479381 NUTM2DQ5VT03 806 aaPredicted RBP13.56□□□□□ -0.24
CMTM1-208ENST00000479381 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
CMTM1-208ENST00000479381 TOM1O60784 492 aa13.55□□□□□ -0.24
CMTM1-208ENST00000479381 SLC26A8Q96RN1 970 aa13.55□□□□□ -0.24
CMTM1-208ENST00000479381 SPHKAPQ2M3C7 1700 aa13.55□□□□□ -0.24
CMTM1-208ENST00000479381 RIMS2Q9UQ26 1411 aa13.55□□□□□ -0.24
CMTM1-208ENST00000479381 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.53□□□□□ -0.24
CMTM1-208ENST00000479381 HFM1A2PYH4 1435 aa13.53□□□□□ -0.24
CMTM1-208ENST00000479381 TMEM131LA2VDJ0 1609 aa13.51□□□□□ -0.25
CMTM1-208ENST00000479381 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
CMTM1-208ENST00000479381 KIF1BO60333 1816 aa13.48□□□□□ -0.25
CMTM1-208ENST00000479381 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
CMTM1-208ENST00000479381 PROSER2Q86WR7 435 aaPredicted RBP13.48□□□□□ -0.25
CMTM1-208ENST00000479381 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
CMTM1-208ENST00000479381 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
CMTM1-208ENST00000479381 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
CMTM1-208ENST00000479381 TRPM2O94759 1503 aa13.45□□□□□ -0.26
CMTM1-208ENST00000479381 KCNA6P17658 529 aa13.45□□□□□ -0.26
CMTM1-208ENST00000479381 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
CMTM1-208ENST00000479381 CLTCL1P53675 1640 aa13.45□□□□□ -0.26
CMTM1-208ENST00000479381 ZFYVE9O95405 1425 aa13.45□□□□□ -0.26
CMTM1-208ENST00000479381 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
CMTM1-208ENST00000479381 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
CMTM1-208ENST00000479381 TMEM94Q12767 1356 aa13.43□□□□□ -0.26
CMTM1-208ENST00000479381 MSH6P52701 1360 aa13.42□□□□□ -0.26
CMTM1-208ENST00000479381 CCDC144AA2RUR9 1427 aa13.41□□□□□ -0.26
CMTM1-208ENST00000479381 MPHOSPH9Q99550 1183 aa13.41□□□□□ -0.26
CMTM1-208ENST00000479381 NKTRP30414 1462 aaKnown RBP13.41□□□□□ -0.26
CMTM1-208ENST00000479381 DIP2AQ14689 1571 aa13.41□□□□□ -0.26
CMTM1-208ENST00000479381 ACIN1Q9UKV3 1341 aaKnown RBP13.4□□□□□ -0.26
CMTM1-208ENST00000479381 HSPA1LP34931 641 aa13.4□□□□□ -0.26
CMTM1-208ENST00000479381 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
CMTM1-208ENST00000479381 RGL3Q3MIN7 710 aa13.39□□□□□ -0.27
CMTM1-208ENST00000479381 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
CMTM1-208ENST00000479381 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
CMTM1-208ENST00000479381 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
CMTM1-208ENST00000479381 XIRP1Q702N8 1843 aaKnown RBP13.37□□□□□ -0.27
CMTM1-208ENST00000479381 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
CMTM1-208ENST00000479381 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
CMTM1-208ENST00000479381 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
CMTM1-208ENST00000479381 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
CMTM1-208ENST00000479381 ATF3P18847 181 aa13.35□□□□□ -0.27
CMTM1-208ENST00000479381 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
CMTM1-208ENST00000479381 RPGRIP1LQ68CZ1 1315 aa13.34□□□□□ -0.27
CMTM1-208ENST00000479381 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
CMTM1-208ENST00000479381 PPLO60437 1756 aa13.31□□□□□ -0.28
CMTM1-208ENST00000479381 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
CMTM1-208ENST00000479381 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
CMTM1-208ENST00000479381 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
CMTM1-208ENST00000479381 ALKQ9UM73 1620 aa13.29□□□□□ -0.28
CMTM1-208ENST00000479381 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
CMTM1-208ENST00000479381 SLAIN2Q9P270 581 aa13.29□□□□□ -0.28
CMTM1-208ENST00000479381 METP08581 1390 aa13.29□□□□□ -0.28
CMTM1-208ENST00000479381 PTPRUQ92729 1446 aa13.29□□□□□ -0.28
CMTM1-208ENST00000479381 C19orf44Q9H6X5 657 aa13.28□□□□□ -0.28
CMTM1-208ENST00000479381 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.27□□□□□ -0.28
CMTM1-208ENST00000479381 STK26Q9P289 416 aa13.27□□□□□ -0.29
CMTM1-208ENST00000479381 ANKRD30BQ9BXX2 1392 aa13.27□□□□□ -0.29
CMTM1-208ENST00000479381 MED1Q15648 1581 aaPredicted RBP13.27□□□□□ -0.29
CMTM1-208ENST00000479381 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
CMTM1-208ENST00000479381 PHLPP1O60346 1717 aa13.26□□□□□ -0.29
CMTM1-208ENST00000479381 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
CMTM1-208ENST00000479381 NCOA3Q9Y6Q9 1424 aa13.26□□□□□ -0.29
CMTM1-208ENST00000479381 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
CMTM1-208ENST00000479381 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
CMTM1-208ENST00000479381 IFT172Q9UG01 1749 aa13.23□□□□□ -0.29
CMTM1-208ENST00000479381 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
CMTM1-208ENST00000479381 MEX3CQ5U5Q3 659 aaKnown RBP13.22□□□□□ -0.29
CMTM1-208ENST00000479381 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms