RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 KCNC4Q03721 635 aa8.88□□□□□ -0.99
SPC25-204ENST00000479309 METTL3Q86U44 580 aaKnown RBP8.88□□□□□ -0.99
SPC25-204ENST00000479309 FAM161AQ3B820 660 aa8.87□□□□□ -0.99
SPC25-204ENST00000479309 APLP1P51693 650 aa8.86□□□□□ -0.99
SPC25-204ENST00000479309 TJAP1Q5JTD0 557 aa8.86□□□□□ -0.99
SPC25-204ENST00000479309 PRR14Q9BWN1 585 aa8.85□□□□□ -0.99
SPC25-204ENST00000479309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.84□□□□□ -0.99
SPC25-204ENST00000479309 RNF40O75150 1001 aa8.83□□□□□ -1
SPC25-204ENST00000479309 IL21Q9HBE4 155 aa8.83□□□□□ -1
SPC25-204ENST00000479309 Q6ZNB5 142 aa8.81□□□□□ -1
SPC25-204ENST00000479309 MTRQ99707 1265 aa8.81□□□□□ -1
SPC25-204ENST00000479309 MAP2K5Q13163 448 aa8.8□□□□□ -1
SPC25-204ENST00000479309 DAXXQ9UER7 740 aaPredicted RBP8.8□□□□□ -1
SPC25-204ENST00000479309 SLC10A3P09131 477 aa8.79□□□□□ -1
SPC25-204ENST00000479309 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
SPC25-204ENST00000479309 LCE2BO14633 110 aa8.78□□□□□ -1
SPC25-204ENST00000479309 ACTN4O43707 911 aaKnown RBP8.78□□□□□ -1
SPC25-204ENST00000479309 PHOX2BQ99453 314 aa8.78□□□□□ -1
SPC25-204ENST00000479309 IRF6O14896 467 aa8.77□□□□□ -1.01
SPC25-204ENST00000479309 KMT5BQ4FZB7 885 aa8.77□□□□□ -1.01
SPC25-204ENST00000479309 RSPH4AQ5TD94 716 aa8.76□□□□□ -1.01
SPC25-204ENST00000479309 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
SPC25-204ENST00000479309 ZNF516Q92618 1163 aa8.76□□□□□ -1.01
SPC25-204ENST00000479309 CFHP08603 1231 aa8.75□□□□□ -1.01
SPC25-204ENST00000479309 PCDHB3Q9Y5E6 796 aa8.75□□□□□ -1.01
SPC25-204ENST00000479309 ZPR1O75312 459 aa8.74□□□□□ -1.01
SPC25-204ENST00000479309 SULF1Q8IWU6 871 aa8.73□□□□□ -1.01
SPC25-204ENST00000479309 BLOC1S3Q6QNY0 202 aa8.72□□□□□ -1.01
SPC25-204ENST00000479309 COPS2P61201 443 aa8.71□□□□□ -1.02
SPC25-204ENST00000479309 ZMYND10O75800 440 aa8.7□□□□□ -1.02
SPC25-204ENST00000479309 BARGINQ6ZT62 677 aa8.7□□□□□ -1.02
SPC25-204ENST00000479309 GCGRP47871 477 aa8.69□□□□□ -1.02
SPC25-204ENST00000479309 PPP1R18Q6NYC8 613 aa8.69□□□□□ -1.02
SPC25-204ENST00000479309 NKX2-3Q8TAU0 364 aa8.69□□□□□ -1.02
SPC25-204ENST00000479309 NLRP7Q8WX94 980 aa8.69□□□□□ -1.02
SPC25-204ENST00000479309 CCDC102AQ96A19 550 aa8.69□□□□□ -1.02
SPC25-204ENST00000479309 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
SPC25-204ENST00000479309 DDX11L8A8MPP1 907 aa8.68□□□□□ -1.02
SPC25-204ENST00000479309 NR1I2O75469 434 aa8.68□□□□□ -1.02
SPC25-204ENST00000479309 ZC3H15Q8WU90 426 aaKnown RBP8.68□□□□□ -1.02
SPC25-204ENST00000479309 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.68□□□□□ -1.02
SPC25-204ENST00000479309 RDH13Q8NBN7 331 aa8.67□□□□□ -1.02
SPC25-204ENST00000479309 CD46P15529 392 aa8.66□□□□□ -1.02
SPC25-204ENST00000479309 GGCXP38435 758 aa8.65□□□□□ -1.02
SPC25-204ENST00000479309 ATP6V1AP38606 617 aa8.65□□□□□ -1.02
SPC25-204ENST00000479309 SCUBE3Q8IX30 993 aa8.65□□□□□ -1.02
SPC25-204ENST00000479309 MORN1Q5T089 497 aa8.64□□□□□ -1.03
SPC25-204ENST00000479309 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
SPC25-204ENST00000479309 ADH1BP00325 375 aa8.63□□□□□ -1.03
SPC25-204ENST00000479309 CLCN1P35523 988 aa8.63□□□□□ -1.03
SPC25-204ENST00000479309 MDM2Q00987 491 aaPredicted RBP8.63□□□□□ -1.03
SPC25-204ENST00000479309 FUT2Q10981 343 aa8.63□□□□□ -1.03
SPC25-204ENST00000479309 TRAF7Q6Q0C0 670 aa8.63□□□□□ -1.03
SPC25-204ENST00000479309 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
SPC25-204ENST00000479309 V9GY48 417 aaPredicted RBP8.63□□□□□ -1.03
SPC25-204ENST00000479309 TLL1O43897 1013 aa8.61□□□□□ -1.03
SPC25-204ENST00000479309 AMHR2Q16671 573 aa8.61□□□□□ -1.03
SPC25-204ENST00000479309 PUS10Q3MIT2 529 aaKnown RBP8.61□□□□□ -1.03
SPC25-204ENST00000479309 KRI1Q8N9T8 703 aaKnown RBP8.61□□□□□ -1.03
SPC25-204ENST00000479309 THAP11Q96EK4 314 aa8.61□□□□□ -1.03
SPC25-204ENST00000479309 FAM217BQ9NTX9 383 aaPredicted RBP8.61□□□□□ -1.03
SPC25-204ENST00000479309 SLC24A1O60721 1099 aa8.6□□□□□ -1.03
SPC25-204ENST00000479309 GRIPAP1Q4V328 841 aa8.6□□□□□ -1.03
SPC25-204ENST00000479309 RNF223E7ERA6 249 aa8.59□□□□□ -1.03
SPC25-204ENST00000479309 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
SPC25-204ENST00000479309 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
SPC25-204ENST00000479309 USP46P62068 366 aa8.58□□□□□ -1.04
SPC25-204ENST00000479309 SPSB2Q99619 263 aa8.58□□□□□ -1.04
SPC25-204ENST00000479309 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
SPC25-204ENST00000479309 SLC27A5Q9Y2P5 690 aa8.58□□□□□ -1.04
SPC25-204ENST00000479309 KDM4AO75164 1064 aa8.57□□□□□ -1.04
SPC25-204ENST00000479309 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
SPC25-204ENST00000479309 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
SPC25-204ENST00000479309 FMNL1O95466 1100 aaPredicted RBP8.56□□□□□ -1.04
SPC25-204ENST00000479309 S1PR4O95977 384 aa8.56□□□□□ -1.04
SPC25-204ENST00000479309 LAPTM4AQ15012 233 aa8.54□□□□□ -1.04
SPC25-204ENST00000479309 Q3C1V9 767 aa8.54□□□□□ -1.04
SPC25-204ENST00000479309 FAM160A2Q8N612 972 aaPredicted RBP8.54□□□□□ -1.04
SPC25-204ENST00000479309 EMID1Q96A84 441 aaPredicted RBP8.54□□□□□ -1.04
SPC25-204ENST00000479309 AK7Q96M32 723 aa8.54□□□□□ -1.04
SPC25-204ENST00000479309 TRIM66O15016 1216 aa8.53□□□□□ -1.04
SPC25-204ENST00000479309 SSTR3P32745 418 aaPredicted RBP8.53□□□□□ -1.04
SPC25-204ENST00000479309 MSS51Q4VC12 460 aa8.53□□□□□ -1.04
SPC25-204ENST00000479309 ZNF775Q96BV0 537 aaPredicted RBP8.53□□□□□ -1.04
SPC25-204ENST00000479309 HOXA2O43364 376 aa8.52□□□□□ -1.05
SPC25-204ENST00000479309 BCANQ96GW7 911 aa8.52□□□□□ -1.05
SPC25-204ENST00000479309 PPEF1O14829 653 aaPredicted RBP8.51□□□□□ -1.05
SPC25-204ENST00000479309 SLC19A1P41440 591 aa8.51□□□□□ -1.05
SPC25-204ENST00000479309 GFRA3O60609 400 aa8.5□□□□□ -1.05
SPC25-204ENST00000479309 GIGYF2Q6Y7W6 1299 aaKnown RBP8.5□□□□□ -1.05
SPC25-204ENST00000479309 RNF19BQ6ZMZ0 732 aa8.5□□□□□ -1.05
SPC25-204ENST00000479309 TTLL12Q14166 644 aaPredicted RBP8.49□□□□□ -1.05
SPC25-204ENST00000479309 SPRYD7Q5W111 196 aa8.49□□□□□ -1.05
SPC25-204ENST00000479309 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
SPC25-204ENST00000479309 MMP16P51512 607 aa8.48□□□□□ -1.05
SPC25-204ENST00000479309 PLA2G2CQ5R387 149 aa8.48□□□□□ -1.05
SPC25-204ENST00000479309 ZNF787Q6DD87 383 aa8.48□□□□□ -1.05
SPC25-204ENST00000479309 ZNF598Q86UK7 904 aaKnown RBP8.48□□□□□ -1.05
SPC25-204ENST00000479309 NUTM1Q86Y26 1132 aa8.48□□□□□ -1.05
SPC25-204ENST00000479309 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms