RNA–Protein interactions for RNA: ENST00000478888.1

GKN1-202, Transcript of gastrokine 1, humanhuman

TSL 2

Gene GKN1, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN1-202ENST00000478888 NXF1Q9UBU9 619 aaKnown RBP7.15□□□□□ -1.26
GKN1-202ENST00000478888 STK24Q9Y6E0 443 aa7.15□□□□□ -1.26
GKN1-202ENST00000478888 EVI5O60447 810 aa7.14□□□□□ -1.27
GKN1-202ENST00000478888 CHGAP10645 457 aaKnown RBP7.14□□□□□ -1.27
GKN1-202ENST00000478888 PPP1R37O75864 691 aa7.13□□□□□ -1.27
GKN1-202ENST00000478888 GPAT2Q6NUI2 795 aa7.13□□□□□ -1.27
GKN1-202ENST00000478888 APLP1P51693 650 aa7.12□□□□□ -1.27
GKN1-202ENST00000478888 COPS2P61201 443 aa7.12□□□□□ -1.27
GKN1-202ENST00000478888 SAMD7Q7Z3H4 446 aa7.12□□□□□ -1.27
GKN1-202ENST00000478888 PKD2L1Q9P0L9 805 aa7.12□□□□□ -1.27
GKN1-202ENST00000478888 PCDHGA10Q9Y5H3 936 aa7.12□□□□□ -1.27
GKN1-202ENST00000478888 ZPR1O75312 459 aa7.11□□□□□ -1.27
GKN1-202ENST00000478888 NPAS3Q8IXF0 933 aa7.11□□□□□ -1.27
GKN1-202ENST00000478888 FOXC1Q12948 553 aa7.1□□□□□ -1.27
GKN1-202ENST00000478888 TOR4AQ9NXH8 423 aa7.1□□□□□ -1.27
GKN1-202ENST00000478888 RNF225M0QZC1 329 aaPredicted RBP7.09□□□□□ -1.27
GKN1-202ENST00000478888 FBXW7Q969H0 707 aa7.09□□□□□ -1.27
GKN1-202ENST00000478888 KIFC2Q96AC6 838 aa7.09□□□□□ -1.27
GKN1-202ENST00000478888 ADAM23O75077 832 aa7.08□□□□□ -1.28
GKN1-202ENST00000478888 SPRYD3Q8NCJ5 442 aa7.07□□□□□ -1.28
GKN1-202ENST00000478888 PPEF1O14829 653 aaPredicted RBP7.06□□□□□ -1.28
GKN1-202ENST00000478888 TYW1BQ6NUM6 668 aa7.06□□□□□ -1.28
GKN1-202ENST00000478888 ERBB4Q15303 1308 aa7.05□□□□□ -1.28
GKN1-202ENST00000478888 DNMT3AQ9Y6K1 912 aaPredicted RBP7.05□□□□□ -1.28
GKN1-202ENST00000478888 H3BM21 787 aa7.03□□□□□ -1.28
GKN1-202ENST00000478888 PLCB2Q00722 1185 aa7.03□□□□□ -1.28
GKN1-202ENST00000478888 CYP4X1Q8N118 509 aa7.03□□□□□ -1.28
GKN1-202ENST00000478888 Q8N3U1 123 aa7.03□□□□□ -1.28
GKN1-202ENST00000478888 FOXK2Q01167 660 aa7.02□□□□□ -1.29
GKN1-202ENST00000478888 C6orf132Q5T0Z8 1188 aa7.02□□□□□ -1.29
GKN1-202ENST00000478888 PACS2Q86VP3 889 aa7.02□□□□□ -1.29
GKN1-202ENST00000478888 VEGFBP49765 207 aa7.01□□□□□ -1.29
GKN1-202ENST00000478888 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
GKN1-202ENST00000478888 RNF40O75150 1001 aa6.99□□□□□ -1.29
GKN1-202ENST00000478888 PHF14O94880 888 aa6.98□□□□□ -1.29
GKN1-202ENST00000478888 TSKSQ9UJT2 592 aa6.98□□□□□ -1.29
GKN1-202ENST00000478888 S1PR4O95977 384 aa6.97□□□□□ -1.29
GKN1-202ENST00000478888 PLA2G2CQ5R387 149 aa6.97□□□□□ -1.29
GKN1-202ENST00000478888 NECTIN2Q92692 538 aa6.97□□□□□ -1.29
GKN1-202ENST00000478888 PPP1R15BQ5SWA1 713 aa6.95□□□□□ -1.3
GKN1-202ENST00000478888 SMAPO00193 183 aa6.94□□□□□ -1.3
GKN1-202ENST00000478888 GTPBP6O43824 516 aaPredicted RBP6.94□□□□□ -1.3
GKN1-202ENST00000478888 PAXIP1Q6ZW49 1069 aaPredicted RBP6.94□□□□□ -1.3
GKN1-202ENST00000478888 TLL1O43897 1013 aa6.93□□□□□ -1.3
GKN1-202ENST00000478888 SLC24A1O60721 1099 aa6.92□□□□□ -1.3
GKN1-202ENST00000478888 MAP3K9P80192 1104 aa6.92□□□□□ -1.3
GKN1-202ENST00000478888 CFAP44Q96MT7 982 aa6.92□□□□□ -1.3
GKN1-202ENST00000478888 TTC24A2A3L6 582 aaPredicted RBP6.91□□□□□ -1.3
GKN1-202ENST00000478888 HDGFP51858 240 aaKnown RBP6.91□□□□□ -1.3
GKN1-202ENST00000478888 NKX1-1Q15270 411 aaPredicted RBP6.91□□□□□ -1.3
GKN1-202ENST00000478888 VSIG10Q8N0Z9 540 aa6.91□□□□□ -1.3
GKN1-202ENST00000478888 ADAMTS8Q9UP79 889 aa6.91□□□□□ -1.3
GKN1-202ENST00000478888 PCDHB3Q9Y5E6 796 aa6.9□□□□□ -1.3
GKN1-202ENST00000478888 SMPD1P17405 629 aa6.88□□□□□ -1.31
GKN1-202ENST00000478888 BLOC1S3Q6QNY0 202 aa6.88□□□□□ -1.31
GKN1-202ENST00000478888 EPAS1Q99814 870 aa6.88□□□□□ -1.31
GKN1-202ENST00000478888 PDE4AP27815 886 aa6.86□□□□□ -1.31
GKN1-202ENST00000478888 P3H3Q8IVL6 736 aa6.86□□□□□ -1.31
GKN1-202ENST00000478888 VSIG8P0DPA2 414 aa6.85□□□□□ -1.31
GKN1-202ENST00000478888 IRS1P35568 1242 aa6.85□□□□□ -1.31
GKN1-202ENST00000478888 RPIAP49247 311 aa6.85□□□□□ -1.31
GKN1-202ENST00000478888 CRISPLD2Q9H0B8 497 aa6.85□□□□□ -1.31
GKN1-202ENST00000478888 HAP1P54257 671 aaPredicted RBP6.84□□□□□ -1.31
GKN1-202ENST00000478888 LCE1DQ5T752 114 aa6.84□□□□□ -1.31
GKN1-202ENST00000478888 PRR14Q9BWN1 585 aa6.84□□□□□ -1.31
GKN1-202ENST00000478888 WDR70Q9NW82 654 aa6.84□□□□□ -1.31
GKN1-202ENST00000478888 MSTNO14793 375 aa6.83□□□□□ -1.32
GKN1-202ENST00000478888 KANK3Q6NY19 840 aa6.83□□□□□ -1.32
GKN1-202ENST00000478888 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
GKN1-202ENST00000478888 CD2BP2O95400 341 aaKnown RBP6.82□□□□□ -1.32
GKN1-202ENST00000478888 TATDN2Q93075 761 aa6.82□□□□□ -1.32
GKN1-202ENST00000478888 C3orf80F5H4A9 247 aa6.81□□□□□ -1.32
GKN1-202ENST00000478888 ADH1BP00325 375 aa6.81□□□□□ -1.32
GKN1-202ENST00000478888 SLF2Q8IX21 1173 aa6.81□□□□□ -1.32
GKN1-202ENST00000478888 RBM33Q96EV2 1170 aaKnown RBP6.81□□□□□ -1.32
GKN1-202ENST00000478888 PNMA3Q9UL41 463 aa6.81□□□□□ -1.32
GKN1-202ENST00000478888 NBPF26B4DH59 902 aa6.8□□□□□ -1.32
GKN1-202ENST00000478888 SNIP1Q8TAD8 396 aaKnown RBP6.8□□□□□ -1.32
GKN1-202ENST00000478888 SLC6A16Q9GZN6 736 aa6.8□□□□□ -1.32
GKN1-202ENST00000478888 K7ELQ4 463 aaPredicted RBP6.79□□□□□ -1.32
GKN1-202ENST00000478888 CDCA7LQ96GN5 454 aa6.78□□□□□ -1.32
GKN1-202ENST00000478888 SPOCK3Q9BQ16 436 aa6.78□□□□□ -1.32
GKN1-202ENST00000478888 FAM198AQ9UFP1 575 aa6.78□□□□□ -1.32
GKN1-202ENST00000478888 MFSD10Q14728 455 aa6.77□□□□□ -1.33
GKN1-202ENST00000478888 HPS1Q92902 700 aa6.77□□□□□ -1.33
GKN1-202ENST00000478888 DDX27Q96GQ7 796 aaKnown RBP6.77□□□□□ -1.33
GKN1-202ENST00000478888 J3QL48 77 aa6.76□□□□□ -1.33
GKN1-202ENST00000478888 SWT1Q5T5J6 900 aaKnown RBP6.75□□□□□ -1.33
GKN1-202ENST00000478888 ARIH1Q9Y4X5 557 aaPredicted RBP6.74□□□□□ -1.33
GKN1-202ENST00000478888 PRSS12P56730 875 aa6.73□□□□□ -1.33
GKN1-202ENST00000478888 KRTAP17-1Q9BYP8 105 aa6.73□□□□□ -1.33
GKN1-202ENST00000478888 KRTAP4-2Q9BYR5 136 aa6.73□□□□□ -1.33
GKN1-202ENST00000478888 TULP1O00294 542 aaPredicted RBP6.72□□□□□ -1.33
GKN1-202ENST00000478888 PLA2G4EQ3MJ16 856 aa6.72□□□□□ -1.33
GKN1-202ENST00000478888 TSHZ2Q9NRE2 1034 aa6.72□□□□□ -1.33
GKN1-202ENST00000478888 SLC4A3P48751 1232 aa6.71□□□□□ -1.34
GKN1-202ENST00000478888 E2F4Q16254 413 aa6.71□□□□□ -1.34
GKN1-202ENST00000478888 ARHGEF1Q92888 912 aaKnown RBP6.71□□□□□ -1.34
GKN1-202ENST00000478888 KRTAP4-9Q9BYQ8 210 aa6.71□□□□□ -1.34
GKN1-202ENST00000478888 GOLGA2P5Q9HBQ8 144 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms