RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 KNSTRNQ9Y448 316 aa23.94■■□□□ 1.42
PDE8A-204ENST00000478717 CFAP70Q5T0N1 1121 aa23.93■■□□□ 1.42
PDE8A-204ENST00000478717 RCAN3Q9UKA8 241 aa23.92■■□□□ 1.42
PDE8A-204ENST00000478717 ABCA9Q8IUA7 1624 aa23.91■■□□□ 1.42
PDE8A-204ENST00000478717 RNF17Q9BXT8 1623 aaKnown RBP23.91■■□□□ 1.42
PDE8A-204ENST00000478717 SPHKAPQ2M3C7 1700 aa23.91■■□□□ 1.42
PDE8A-204ENST00000478717 RRP1P56182 461 aaKnown RBP23.9■■□□□ 1.42
PDE8A-204ENST00000478717 ADAMTS8Q9UP79 889 aa23.9■■□□□ 1.42
PDE8A-204ENST00000478717 UGGT1Q9NYU2 1555 aa23.89■■□□□ 1.42
PDE8A-204ENST00000478717 DEPDC5O75140 1603 aa23.89■■□□□ 1.42
PDE8A-204ENST00000478717 PDE4AP27815 886 aa23.89■■□□□ 1.42
PDE8A-204ENST00000478717 ADGRF5Q8IZF2 1346 aa23.89■■□□□ 1.41
PDE8A-204ENST00000478717 SCAF11Q99590 1463 aaKnown RBP23.89■■□□□ 1.41
PDE8A-204ENST00000478717 STAC3Q96MF2 364 aa23.89■■□□□ 1.41
PDE8A-204ENST00000478717 INO80Q9ULG1 1556 aaPredicted RBP23.89■■□□□ 1.41
PDE8A-204ENST00000478717 AMER1Q5JTC6 1135 aaPredicted RBP23.87■■□□□ 1.41
PDE8A-204ENST00000478717 TET3O43151 1660 aa23.87■■□□□ 1.41
PDE8A-204ENST00000478717 NPM1P06748 294 aaKnown RBP eCLIP23.87■■□□□ 1.41
PDE8A-204ENST00000478717 PDE3BQ13370 1112 aa23.87■■□□□ 1.41
PDE8A-204ENST00000478717 SKAP1Q86WV1 359 aa23.87■■□□□ 1.41
PDE8A-204ENST00000478717 EXOC6Q8TAG9 804 aa23.87■■□□□ 1.41
PDE8A-204ENST00000478717 USP35Q9P2H5 1018 aa23.87■■□□□ 1.41
PDE8A-204ENST00000478717 CEP152O94986 1710 aa23.87■■□□□ 1.41
PDE8A-204ENST00000478717 PPP2R1AP30153 589 aa23.86■■□□□ 1.41
PDE8A-204ENST00000478717 CDCA8Q53HL2 280 aa23.85■■□□□ 1.41
PDE8A-204ENST00000478717 CHGAP10645 457 aaKnown RBP23.85■■□□□ 1.41
PDE8A-204ENST00000478717 VWDEQ8N2E2 1590 aa23.84■■□□□ 1.41
PDE8A-204ENST00000478717 SLC4A3P48751 1232 aa23.83■■□□□ 1.41
PDE8A-204ENST00000478717 IQGAP1P46940 1657 aa23.83■■□□□ 1.41
PDE8A-204ENST00000478717 GGT6Q6P531 493 aa23.83■■□□□ 1.41
PDE8A-204ENST00000478717 PLIN1O60240 522 aa23.82■■□□□ 1.4
PDE8A-204ENST00000478717 GSE1Q14687 1217 aa23.82■■□□□ 1.4
PDE8A-204ENST00000478717 MROH1Q8NDA8 1641 aa23.8■■□□□ 1.4
PDE8A-204ENST00000478717 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
PDE8A-204ENST00000478717 BLMP54132 1417 aaPredicted RBP23.8■■□□□ 1.4
PDE8A-204ENST00000478717 PPM1GO15355 546 aaPredicted RBP23.79■■□□□ 1.4
PDE8A-204ENST00000478717 BACH2Q9BYV9 841 aa23.79■■□□□ 1.4
PDE8A-204ENST00000478717 FRAT1Q92837 279 aaPredicted RBP23.78■■□□□ 1.4
PDE8A-204ENST00000478717 WDR43Q15061 677 aaKnown RBP eCLIP23.78■■□□□ 1.4
PDE8A-204ENST00000478717 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
PDE8A-204ENST00000478717 KIDINS220Q9ULH0 1771 aa23.77■■□□□ 1.4
PDE8A-204ENST00000478717 TCERG1O14776 1098 aaKnown RBP23.75■■□□□ 1.39
PDE8A-204ENST00000478717 CD109Q6YHK3 1445 aa23.75■■□□□ 1.39
PDE8A-204ENST00000478717 ZNF518AQ6AHZ1 1483 aa23.75■■□□□ 1.39
PDE8A-204ENST00000478717 NFKBIBQ15653 356 aa23.74■■□□□ 1.39
PDE8A-204ENST00000478717 CARD14Q9BXL6 1004 aa23.72■■□□□ 1.39
PDE8A-204ENST00000478717 CFAP65Q6ZU64 1925 aaKnown RBP23.72■■□□□ 1.39
PDE8A-204ENST00000478717 EFCAB6Q5THR3 1501 aa23.72■■□□□ 1.39
PDE8A-204ENST00000478717 TRAK1Q9UPV9 953 aa23.71■■□□□ 1.39
PDE8A-204ENST00000478717 INSRP06213 1382 aa23.71■■□□□ 1.39
PDE8A-204ENST00000478717 RAPGEF3O95398 923 aa23.71■■□□□ 1.39
PDE8A-204ENST00000478717 MAP3K4Q9Y6R4 1608 aa23.7■■□□□ 1.39
PDE8A-204ENST00000478717 SYNMO15061 1565 aa23.7■■□□□ 1.39
PDE8A-204ENST00000478717 CCDC146Q8IYE0 955 aa23.7■■□□□ 1.39
PDE8A-204ENST00000478717 PPRC1Q5VV67 1664 aaKnown RBP23.7■■□□□ 1.38
PDE8A-204ENST00000478717 ASXL1Q8IXJ9 1541 aa23.7■■□□□ 1.38
PDE8A-204ENST00000478717 NOS1P29475 1434 aa23.7■■□□□ 1.38
PDE8A-204ENST00000478717 PLEKHH1Q9ULM0 1364 aa23.7■■□□□ 1.38
PDE8A-204ENST00000478717 TMEM132EQ6IEE7 984 aa23.69■■□□□ 1.38
PDE8A-204ENST00000478717 ABCA6Q8N139 1617 aa23.69■■□□□ 1.38
PDE8A-204ENST00000478717 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
PDE8A-204ENST00000478717 ERVK-7P63135 1459 aa23.68■■□□□ 1.38
PDE8A-204ENST00000478717 MYOM2P54296 1465 aa23.68■■□□□ 1.38
PDE8A-204ENST00000478717 KIF1BO60333 1816 aa23.67■■□□□ 1.38
PDE8A-204ENST00000478717 NPATQ14207 1427 aa23.67■■□□□ 1.38
PDE8A-204ENST00000478717 ZMYM4Q5VZL5 1548 aa23.66■■□□□ 1.38
PDE8A-204ENST00000478717 MYOM1P52179 1685 aa23.66■■□□□ 1.38
PDE8A-204ENST00000478717 MROH2AA6NES4 1674 aa23.65■■□□□ 1.38
PDE8A-204ENST00000478717 C20orf194Q5TEA3 1177 aa23.65■■□□□ 1.38
PDE8A-204ENST00000478717 CRBNQ96SW2 442 aa23.65■■□□□ 1.38
PDE8A-204ENST00000478717 POGZQ7Z3K3 1410 aa23.64■■□□□ 1.38
PDE8A-204ENST00000478717 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.38
PDE8A-204ENST00000478717 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.38
PDE8A-204ENST00000478717 DUSP27Q5VZP5 1158 aa23.64■■□□□ 1.37
PDE8A-204ENST00000478717 CENPJQ9HC77 1338 aaPredicted RBP23.63■■□□□ 1.37
PDE8A-204ENST00000478717 NEURL4Q96JN8 1562 aa23.63■■□□□ 1.37
PDE8A-204ENST00000478717 SLC24A1O60721 1099 aa23.62■■□□□ 1.37
PDE8A-204ENST00000478717 KDM5AP29375 1690 aaKnown RBP23.62■■□□□ 1.37
PDE8A-204ENST00000478717 NPC1L1Q9UHC9 1359 aa23.62■■□□□ 1.37
PDE8A-204ENST00000478717 APAF1O14727 1248 aa23.61■■□□□ 1.37
PDE8A-204ENST00000478717 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
PDE8A-204ENST00000478717 PIK3C2GO75747 1445 aa23.61■■□□□ 1.37
PDE8A-204ENST00000478717 LMTK2Q8IWU2 1503 aa23.61■■□□□ 1.37
PDE8A-204ENST00000478717 SLC12A5Q9H2X9 1139 aa23.61■■□□□ 1.37
PDE8A-204ENST00000478717 C14orf93Q9H972 538 aaKnown RBP23.61■■□□□ 1.37
PDE8A-204ENST00000478717 ZNF521Q96K83 1311 aa23.6■■□□□ 1.37
PDE8A-204ENST00000478717 FRMPD1Q5SYB0 1578 aa23.6■■□□□ 1.37
PDE8A-204ENST00000478717 TNNT2P45379 298 aaPredicted RBP23.6■■□□□ 1.37
PDE8A-204ENST00000478717 MLH3Q9UHC1 1453 aa23.59■■□□□ 1.37
PDE8A-204ENST00000478717 NRXN1Q9ULB1 1477 aa23.59■■□□□ 1.37
PDE8A-204ENST00000478717 SPINK5Q9NQ38 1064 aaPredicted RBP23.58■■□□□ 1.37
PDE8A-204ENST00000478717 MS4A1P11836 297 aa23.57■■□□□ 1.36
PDE8A-204ENST00000478717 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
PDE8A-204ENST00000478717 FRAT2O75474 233 aaPredicted RBP23.56■■□□□ 1.36
PDE8A-204ENST00000478717 ADGRB3O60242 1522 aa23.56■■□□□ 1.36
PDE8A-204ENST00000478717 SLFN5Q08AF3 891 aa23.54■■□□□ 1.36
PDE8A-204ENST00000478717 DDRGK1Q96HY6 314 aa23.54■■□□□ 1.36
PDE8A-204ENST00000478717 DAXXQ9UER7 740 aaPredicted RBP23.54■■□□□ 1.36
PDE8A-204ENST00000478717 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.36
PDE8A-204ENST00000478717 DMRT2Q9Y5R5 561 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms