RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.4□□□□□ -0.42
SYCP3-205ENST00000478238 GNPATO15228 680 aa12.4□□□□□ -0.42
SYCP3-205ENST00000478238 OATP04181 439 aa12.4□□□□□ -0.42
SYCP3-205ENST00000478238 PXYLP1Q8TE99 480 aa12.4□□□□□ -0.42
SYCP3-205ENST00000478238 FECHP22830 423 aa12.39□□□□□ -0.43
SYCP3-205ENST00000478238 PRR14Q9BWN1 585 aa12.39□□□□□ -0.43
SYCP3-205ENST00000478238 COPS2P61201 443 aa12.37□□□□□ -0.43
SYCP3-205ENST00000478238 METTL3Q86U44 580 aaKnown RBP12.36□□□□□ -0.43
SYCP3-205ENST00000478238 GPIHBP1Q8IV16 184 aa12.35□□□□□ -0.43
SYCP3-205ENST00000478238 IRX2Q9BZI1 471 aaPredicted RBP12.35□□□□□ -0.43
SYCP3-205ENST00000478238 PCDHB3Q9Y5E6 796 aa12.35□□□□□ -0.43
SYCP3-205ENST00000478238 PPP1R18Q6NYC8 613 aa12.33□□□□□ -0.44
SYCP3-205ENST00000478238 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
SYCP3-205ENST00000478238 CFHP08603 1231 aa12.32□□□□□ -0.44
SYCP3-205ENST00000478238 SLC10A3P09131 477 aa12.32□□□□□ -0.44
SYCP3-205ENST00000478238 KMT5BQ4FZB7 885 aa12.32□□□□□ -0.44
SYCP3-205ENST00000478238 ZPR1O75312 459 aa12.31□□□□□ -0.44
SYCP3-205ENST00000478238 BLOC1S3Q6QNY0 202 aa12.31□□□□□ -0.44
SYCP3-205ENST00000478238 ACTN4O43707 911 aaKnown RBP12.3□□□□□ -0.44
SYCP3-205ENST00000478238 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.29□□□□□ -0.44
SYCP3-205ENST00000478238 TULP1O00294 542 aaPredicted RBP12.26□□□□□ -0.45
SYCP3-205ENST00000478238 NLRP7Q8WX94 980 aa12.25□□□□□ -0.45
SYCP3-205ENST00000478238 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
SYCP3-205ENST00000478238 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
SYCP3-205ENST00000478238 PHOX2BQ99453 314 aa12.24□□□□□ -0.45
SYCP3-205ENST00000478238 PRKD2Q9BZL6 878 aa12.24□□□□□ -0.45
SYCP3-205ENST00000478238 TLL1O43897 1013 aa12.23□□□□□ -0.45
SYCP3-205ENST00000478238 GGCXP38435 758 aa12.23□□□□□ -0.45
SYCP3-205ENST00000478238 RDH13Q8NBN7 331 aa12.2□□□□□ -0.46
SYCP3-205ENST00000478238 TMUB1Q9BVT8 246 aa12.2□□□□□ -0.46
SYCP3-205ENST00000478238 DDX11L8A8MPP1 907 aa12.19□□□□□ -0.46
SYCP3-205ENST00000478238 V9GY48 417 aaPredicted RBP12.19□□□□□ -0.46
SYCP3-205ENST00000478238 NR1I2O75469 434 aa12.18□□□□□ -0.46
SYCP3-205ENST00000478238 MAP2K5Q13163 448 aa12.18□□□□□ -0.46
SYCP3-205ENST00000478238 PUS10Q3MIT2 529 aaKnown RBP12.16□□□□□ -0.46
SYCP3-205ENST00000478238 SULF1Q8IWU6 871 aa12.16□□□□□ -0.46
SYCP3-205ENST00000478238 RNF223E7ERA6 249 aa12.15□□□□□ -0.46
SYCP3-205ENST00000478238 SCUBE3Q8IX30 993 aa12.15□□□□□ -0.46
SYCP3-205ENST00000478238 ADH1BP00325 375 aa12.14□□□□□ -0.47
SYCP3-205ENST00000478238 S1PR4O95977 384 aa12.13□□□□□ -0.47
SYCP3-205ENST00000478238 IRF6O14896 467 aa12.12□□□□□ -0.47
SYCP3-205ENST00000478238 GCGRP47871 477 aa12.12□□□□□ -0.47
SYCP3-205ENST00000478238 GFRA3O60609 400 aa12.11□□□□□ -0.47
SYCP3-205ENST00000478238 FUT2Q10981 343 aa12.11□□□□□ -0.47
SYCP3-205ENST00000478238 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
SYCP3-205ENST00000478238 Q6ZNB5 142 aa12.11□□□□□ -0.47
SYCP3-205ENST00000478238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.11□□□□□ -0.47
SYCP3-205ENST00000478238 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
SYCP3-205ENST00000478238 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
SYCP3-205ENST00000478238 MORN1Q5T089 497 aa12.09□□□□□ -0.47
SYCP3-205ENST00000478238 ANKLE1Q8NAG6 615 aa12.09□□□□□ -0.47
SYCP3-205ENST00000478238 SLC6A16Q9GZN6 736 aa12.09□□□□□ -0.47
SYCP3-205ENST00000478238 ATP6V1AP38606 617 aa12.08□□□□□ -0.48
SYCP3-205ENST00000478238 SPSB2Q99619 263 aa12.08□□□□□ -0.48
SYCP3-205ENST00000478238 CCDC102AQ96A19 550 aa12.07□□□□□ -0.48
SYCP3-205ENST00000478238 EMID1Q96A84 441 aaPredicted RBP12.07□□□□□ -0.48
SYCP3-205ENST00000478238 SLC19A1P41440 591 aa12.05□□□□□ -0.48
SYCP3-205ENST00000478238 MDM2Q00987 491 aaPredicted RBP12.05□□□□□ -0.48
SYCP3-205ENST00000478238 LMOD2Q6P5Q4 547 aa12.05□□□□□ -0.48
SYCP3-205ENST00000478238 SLC27A5Q9Y2P5 690 aa12.05□□□□□ -0.48
SYCP3-205ENST00000478238 CD46P15529 392 aa12.04□□□□□ -0.48
SYCP3-205ENST00000478238 NRG2O14511 850 aaPredicted RBP12.03□□□□□ -0.48
SYCP3-205ENST00000478238 THAP11Q96EK4 314 aa12.03□□□□□ -0.48
SYCP3-205ENST00000478238 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
SYCP3-205ENST00000478238 FMNL1O95466 1100 aaPredicted RBP12□□□□□ -0.49
SYCP3-205ENST00000478238 GRIPAP1Q4V328 841 aa12□□□□□ -0.49
SYCP3-205ENST00000478238 SPRYD7Q5W111 196 aa12□□□□□ -0.49
SYCP3-205ENST00000478238 LIAT1Q6ZQX7 453 aa12□□□□□ -0.49
SYCP3-205ENST00000478238 PLA2G2CQ5R387 149 aa11.99□□□□□ -0.49
SYCP3-205ENST00000478238 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
SYCP3-205ENST00000478238 LCE2BO14633 110 aa11.98□□□□□ -0.49
SYCP3-205ENST00000478238 BRICD5Q6PL45 260 aa11.98□□□□□ -0.49
SYCP3-205ENST00000478238 ZNF598Q86UK7 904 aaKnown RBP11.98□□□□□ -0.49
SYCP3-205ENST00000478238 GPCPD1Q9NPB8 672 aa11.98□□□□□ -0.49
SYCP3-205ENST00000478238 TRIM67Q6ZTA4 783 aa11.97□□□□□ -0.49
SYCP3-205ENST00000478238 FAM160A2Q8N612 972 aaPredicted RBP11.97□□□□□ -0.49
SYCP3-205ENST00000478238 KDM4AO75164 1064 aa11.96□□□□□ -0.49
SYCP3-205ENST00000478238 CLCN1P35523 988 aa11.96□□□□□ -0.49
SYCP3-205ENST00000478238 RNF19BQ6ZMZ0 732 aa11.96□□□□□ -0.49
SYCP3-205ENST00000478238 TRAF7Q6Q0C0 670 aa11.95□□□□□ -0.5
SYCP3-205ENST00000478238 ZNF697Q5TEC3 545 aa11.94□□□□□ -0.5
SYCP3-205ENST00000478238 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
SYCP3-205ENST00000478238 KRI1Q8N9T8 703 aaKnown RBP11.94□□□□□ -0.5
SYCP3-205ENST00000478238 PRDM9Q9NQV7 894 aa11.94□□□□□ -0.5
SYCP3-205ENST00000478238 FAM217BQ9NTX9 383 aaPredicted RBP11.94□□□□□ -0.5
SYCP3-205ENST00000478238 ZMYND10O75800 440 aa11.93□□□□□ -0.5
SYCP3-205ENST00000478238 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
SYCP3-205ENST00000478238 FCF1Q9Y324 198 aaKnown RBP11.93□□□□□ -0.5
SYCP3-205ENST00000478238 USP46P62068 366 aa11.92□□□□□ -0.5
SYCP3-205ENST00000478238 Q3C1V9 767 aa11.92□□□□□ -0.5
SYCP3-205ENST00000478238 MSS51Q4VC12 460 aa11.92□□□□□ -0.5
SYCP3-205ENST00000478238 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
SYCP3-205ENST00000478238 PRR20EP86478 221 aa11.9□□□□□ -0.5
SYCP3-205ENST00000478238 PRR20CP86479 221 aa11.9□□□□□ -0.5
SYCP3-205ENST00000478238 PRR20DP86480 221 aa11.9□□□□□ -0.5
SYCP3-205ENST00000478238 PRR20BP86481 221 aa11.9□□□□□ -0.5
SYCP3-205ENST00000478238 PRR20AP86496 221 aa11.9□□□□□ -0.5
SYCP3-205ENST00000478238 HLA-CQ95604 372 aa11.9□□□□□ -0.5
SYCP3-205ENST00000478238 REPIN1Q9BWE0 567 aaKnown RBP11.9□□□□□ -0.5
SYCP3-205ENST00000478238 HOXA2O43364 376 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms