RNA–Protein interactions for RNA: ENST00000478160.1

NMD3-209, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 3

Gene NMD3, Length 606 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-209ENST00000478160 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
NMD3-209ENST00000478160 CDHR5Q9HBB8 845 aa9.26□□□□□ -0.93
NMD3-209ENST00000478160 TNFRSF10AO00220 468 aa9.25□□□□□ -0.93
NMD3-209ENST00000478160 BCANQ96GW7 911 aa9.25□□□□□ -0.93
NMD3-209ENST00000478160 PCDHB3Q9Y5E6 796 aa9.25□□□□□ -0.93
NMD3-209ENST00000478160 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
NMD3-209ENST00000478160 PPEF1O14829 653 aaPredicted RBP9.24□□□□□ -0.93
NMD3-209ENST00000478160 ST8SIA5O15466 376 aa9.24□□□□□ -0.93
NMD3-209ENST00000478160 ZNF697Q5TEC3 545 aa9.24□□□□□ -0.93
NMD3-209ENST00000478160 PRR20EP86478 221 aa9.23□□□□□ -0.93
NMD3-209ENST00000478160 PRR20CP86479 221 aa9.23□□□□□ -0.93
NMD3-209ENST00000478160 PRR20DP86480 221 aa9.23□□□□□ -0.93
NMD3-209ENST00000478160 PRR20BP86481 221 aa9.23□□□□□ -0.93
NMD3-209ENST00000478160 PRR20AP86496 221 aa9.23□□□□□ -0.93
NMD3-209ENST00000478160 BLOC1S3Q6QNY0 202 aa9.23□□□□□ -0.93
NMD3-209ENST00000478160 LIAT1Q6ZQX7 453 aa9.22□□□□□ -0.93
NMD3-209ENST00000478160 TLL1O43897 1013 aa9.21□□□□□ -0.94
NMD3-209ENST00000478160 SLC4A3P48751 1232 aa9.21□□□□□ -0.94
NMD3-209ENST00000478160 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.94
NMD3-209ENST00000478160 WDR70Q9NW82 654 aa9.21□□□□□ -0.94
NMD3-209ENST00000478160 ANKLE1Q8NAG6 615 aa9.19□□□□□ -0.94
NMD3-209ENST00000478160 AAASQ9NRG9 546 aa9.19□□□□□ -0.94
NMD3-209ENST00000478160 GDF9O60383 454 aa9.18□□□□□ -0.94
NMD3-209ENST00000478160 S1PR4O95977 384 aa9.18□□□□□ -0.94
NMD3-209ENST00000478160 PADI6Q6TGC4 694 aa9.18□□□□□ -0.94
NMD3-209ENST00000478160 RBM27Q9P2N5 1060 aaKnown RBP9.18□□□□□ -0.94
NMD3-209ENST00000478160 PRR14Q9BWN1 585 aa9.17□□□□□ -0.94
NMD3-209ENST00000478160 OSBPP22059 807 aa9.16□□□□□ -0.94
NMD3-209ENST00000478160 WFS1O76024 890 aa9.14□□□□□ -0.95
NMD3-209ENST00000478160 FOXC1Q12948 553 aa9.14□□□□□ -0.95
NMD3-209ENST00000478160 TTC13Q8NBP0 860 aa9.14□□□□□ -0.95
NMD3-209ENST00000478160 DACH1Q9UI36 760 aa9.13□□□□□ -0.95
NMD3-209ENST00000478160 EYA1Q99502 592 aa9.12□□□□□ -0.95
NMD3-209ENST00000478160 NPDC1Q9NQX5 325 aaPredicted RBP9.11□□□□□ -0.95
NMD3-209ENST00000478160 STK17AQ9UEE5 414 aa9.1□□□□□ -0.95
NMD3-209ENST00000478160 C11orf95C9JLR9 678 aaPredicted RBP9.09□□□□□ -0.95
NMD3-209ENST00000478160 PRKCSHP14314 528 aaPredicted RBP9.09□□□□□ -0.95
NMD3-209ENST00000478160 E2F4Q16254 413 aa9.09□□□□□ -0.95
NMD3-209ENST00000478160 PLA2G2CQ5R387 149 aa9.09□□□□□ -0.95
NMD3-209ENST00000478160 KCNV2Q8TDN2 545 aa9.09□□□□□ -0.95
NMD3-209ENST00000478160 GMPR2Q9P2T1 348 aaKnown RBP9.09□□□□□ -0.95
NMD3-209ENST00000478160 KMT5BQ4FZB7 885 aa9.07□□□□□ -0.96
NMD3-209ENST00000478160 SLC6A16Q9GZN6 736 aa9.07□□□□□ -0.96
NMD3-209ENST00000478160 PKD2L1Q9P0L9 805 aa9.07□□□□□ -0.96
NMD3-209ENST00000478160 ADH1BP00325 375 aa9.06□□□□□ -0.96
NMD3-209ENST00000478160 AXIN1O15169 862 aa9.05□□□□□ -0.96
NMD3-209ENST00000478160 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
NMD3-209ENST00000478160 INSM1Q01101 510 aaPredicted RBP9.05□□□□□ -0.96
NMD3-209ENST00000478160 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
NMD3-209ENST00000478160 P3H3Q8IVL6 736 aa9.05□□□□□ -0.96
NMD3-209ENST00000478160 CFHP08603 1231 aa9.04□□□□□ -0.96
NMD3-209ENST00000478160 NR1I2O75469 434 aa9.03□□□□□ -0.96
NMD3-209ENST00000478160 DNAJB2P25686 324 aa9.03□□□□□ -0.96
NMD3-209ENST00000478160 TPRNQ4KMQ1 711 aa9.03□□□□□ -0.96
NMD3-209ENST00000478160 CRIPAKQ8N1N5 446 aa9.03□□□□□ -0.96
NMD3-209ENST00000478160 ARIH1Q9Y4X5 557 aaPredicted RBP9.02□□□□□ -0.97
NMD3-209ENST00000478160 WIPF1O43516 503 aa9.01□□□□□ -0.97
NMD3-209ENST00000478160 LMOD2Q6P5Q4 547 aa9.01□□□□□ -0.97
NMD3-209ENST00000478160 CYP4X1Q8N118 509 aa9.01□□□□□ -0.97
NMD3-209ENST00000478160 AVPP01185 164 aa9□□□□□ -0.97
NMD3-209ENST00000478160 TMEM134Q9H6X4 195 aa9□□□□□ -0.97
NMD3-209ENST00000478160 RBM46Q8TBY0 533 aaKnown RBP8.99□□□□□ -0.97
NMD3-209ENST00000478160 TOR4AQ9NXH8 423 aa8.99□□□□□ -0.97
NMD3-209ENST00000478160 SCUBE3Q8IX30 993 aa8.98□□□□□ -0.97
NMD3-209ENST00000478160 RCCD1A6NED2 376 aa8.96□□□□□ -0.98
NMD3-209ENST00000478160 SLC10A3P09131 477 aa8.96□□□□□ -0.98
NMD3-209ENST00000478160 CTC1Q2NKJ3 1217 aa8.96□□□□□ -0.98
NMD3-209ENST00000478160 FAM161AQ3B820 660 aa8.96□□□□□ -0.98
NMD3-209ENST00000478160 PUS10Q3MIT2 529 aaKnown RBP8.96□□□□□ -0.98
NMD3-209ENST00000478160 ARHGEF1Q92888 912 aaKnown RBP8.96□□□□□ -0.98
NMD3-209ENST00000478160 SPSB2Q99619 263 aa8.96□□□□□ -0.98
NMD3-209ENST00000478160 CD2BP2O95400 341 aaKnown RBP8.95□□□□□ -0.98
NMD3-209ENST00000478160 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
NMD3-209ENST00000478160 SNRPBP14678 240 aaKnown RBP8.94□□□□□ -0.98
NMD3-209ENST00000478160 RPIAP49247 311 aa8.94□□□□□ -0.98
NMD3-209ENST00000478160 TTC24A2A3L6 582 aaPredicted RBP8.93□□□□□ -0.98
NMD3-209ENST00000478160 TERTO14746 1132 aaKnown RBP8.93□□□□□ -0.98
NMD3-209ENST00000478160 SEMA3EO15041 775 aa8.93□□□□□ -0.98
NMD3-209ENST00000478160 ADGRG1Q9Y653 693 aa8.93□□□□□ -0.98
NMD3-209ENST00000478160 SMCPP49901 116 aaPredicted RBP8.92□□□□□ -0.98
NMD3-209ENST00000478160 FCF1Q9Y324 198 aaKnown RBP8.92□□□□□ -0.98
NMD3-209ENST00000478160 ATP13A2Q9NQ11 1180 aa8.9□□□□□ -0.98
NMD3-209ENST00000478160 PTGDRQ13258 359 aa8.89□□□□□ -0.99
NMD3-209ENST00000478160 LOC100996750A0A140TA64 210 aa8.88□□□□□ -0.99
NMD3-209ENST00000478160 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
NMD3-209ENST00000478160 KRTAP4-6Q9BYQ5 205 aa8.88□□□□□ -0.99
NMD3-209ENST00000478160 FAM181BA6NEQ2 426 aa8.85□□□□□ -0.99
NMD3-209ENST00000478160 SMPD1P17405 629 aa8.85□□□□□ -0.99
NMD3-209ENST00000478160 TRIM47Q96LD4 638 aa8.85□□□□□ -0.99
NMD3-209ENST00000478160 SENP2Q9HC62 589 aa8.85□□□□□ -0.99
NMD3-209ENST00000478160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.84□□□□□ -0.99
NMD3-209ENST00000478160 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
NMD3-209ENST00000478160 TULP1O00294 542 aaPredicted RBP8.84□□□□□ -0.99
NMD3-209ENST00000478160 ZBTB24O43167 697 aaPredicted RBP8.84□□□□□ -0.99
NMD3-209ENST00000478160 RSPH4AQ5TD94 716 aa8.84□□□□□ -0.99
NMD3-209ENST00000478160 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.84□□□□□ -0.99
NMD3-209ENST00000478160 TESPA1A2RU30 521 aaPredicted RBP8.83□□□□□ -1
NMD3-209ENST00000478160 FAM160A2Q8N612 972 aaPredicted RBP8.83□□□□□ -1
NMD3-209ENST00000478160 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
NMD3-209ENST00000478160 PRDM9Q9NQV7 894 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms