RNA–Protein interactions for RNA: ENST00000478043.1

SMIM9-202, Transcript of small integral membrane protein 9, humanhuman

TSL 4

Gene SMIM9, Length 593 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9-202ENST00000478043 SLC10A3P09131 477 aa10.06□□□□□ -0.8
SMIM9-202ENST00000478043 NYAP1Q6ZVC0 841 aa10.06□□□□□ -0.8
SMIM9-202ENST00000478043 COPS2P61201 443 aa10.05□□□□□ -0.8
SMIM9-202ENST00000478043 TJAP1Q5JTD0 557 aa10.05□□□□□ -0.8
SMIM9-202ENST00000478043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.04□□□□□ -0.8
SMIM9-202ENST00000478043 KCNC4Q03721 635 aa10.04□□□□□ -0.8
SMIM9-202ENST00000478043 MTRQ99707 1265 aa10.04□□□□□ -0.8
SMIM9-202ENST00000478043 IRF6O14896 467 aa10.03□□□□□ -0.8
SMIM9-202ENST00000478043 ITGBL1O95965 494 aaPredicted RBP10.03□□□□□ -0.8
SMIM9-202ENST00000478043 SLC24A1O60721 1099 aa10.02□□□□□ -0.81
SMIM9-202ENST00000478043 SLC4A3P48751 1232 aa10.02□□□□□ -0.81
SMIM9-202ENST00000478043 NKX2-3Q8TAU0 364 aa10.02□□□□□ -0.81
SMIM9-202ENST00000478043 DDX11L8A8MPP1 907 aa10□□□□□ -0.81
SMIM9-202ENST00000478043 KRI1Q8N9T8 703 aaKnown RBP10□□□□□ -0.81
SMIM9-202ENST00000478043 ZC3H15Q8WU90 426 aaKnown RBP10□□□□□ -0.81
SMIM9-202ENST00000478043 CFHP08603 1231 aa9.99□□□□□ -0.81
SMIM9-202ENST00000478043 MAP2K5Q13163 448 aa9.99□□□□□ -0.81
SMIM9-202ENST00000478043 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
SMIM9-202ENST00000478043 BLOC1S3Q6QNY0 202 aa9.98□□□□□ -0.81
SMIM9-202ENST00000478043 RDH13Q8NBN7 331 aa9.98□□□□□ -0.81
SMIM9-202ENST00000478043 A0A0G2JS52 829 aa9.97□□□□□ -0.81
SMIM9-202ENST00000478043 IFFO2Q5TF58 517 aa9.97□□□□□ -0.81
SMIM9-202ENST00000478043 CCDC102AQ96A19 550 aa9.97□□□□□ -0.81
SMIM9-202ENST00000478043 IL21Q9HBE4 155 aa9.97□□□□□ -0.81
SMIM9-202ENST00000478043 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
SMIM9-202ENST00000478043 MINK1Q8N4C8 1332 aaPredicted RBP9.97□□□□□ -0.81
SMIM9-202ENST00000478043 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.82
SMIM9-202ENST00000478043 PUS10Q3MIT2 529 aaKnown RBP9.96□□□□□ -0.82
SMIM9-202ENST00000478043 ZMYND10O75800 440 aa9.94□□□□□ -0.82
SMIM9-202ENST00000478043 ACTN4O43707 911 aaKnown RBP9.93□□□□□ -0.82
SMIM9-202ENST00000478043 KMT5BQ4FZB7 885 aa9.93□□□□□ -0.82
SMIM9-202ENST00000478043 BARGINQ6ZT62 677 aa9.93□□□□□ -0.82
SMIM9-202ENST00000478043 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
SMIM9-202ENST00000478043 TLL1O43897 1013 aa9.91□□□□□ -0.82
SMIM9-202ENST00000478043 ZPR1O75312 459 aa9.91□□□□□ -0.82
SMIM9-202ENST00000478043 RSPH4AQ5TD94 716 aa9.91□□□□□ -0.82
SMIM9-202ENST00000478043 PPP1R18Q6NYC8 613 aa9.91□□□□□ -0.82
SMIM9-202ENST00000478043 REPIN1Q9BWE0 567 aaKnown RBP9.9□□□□□ -0.82
SMIM9-202ENST00000478043 PRR14Q9BWN1 585 aa9.89□□□□□ -0.83
SMIM9-202ENST00000478043 GCGRP47871 477 aa9.88□□□□□ -0.83
SMIM9-202ENST00000478043 FUT2Q10981 343 aa9.88□□□□□ -0.83
SMIM9-202ENST00000478043 SCUBE3Q8IX30 993 aa9.87□□□□□ -0.83
SMIM9-202ENST00000478043 SULF1Q8IWU6 871 aa9.86□□□□□ -0.83
SMIM9-202ENST00000478043 PPEF1O14829 653 aaPredicted RBP9.85□□□□□ -0.83
SMIM9-202ENST00000478043 CD46P15529 392 aa9.84□□□□□ -0.83
SMIM9-202ENST00000478043 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.84□□□□□ -0.83
SMIM9-202ENST00000478043 HLA-CQ95604 372 aa9.83□□□□□ -0.84
SMIM9-202ENST00000478043 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
SMIM9-202ENST00000478043 SLC24A3Q9HC58 644 aa9.83□□□□□ -0.84
SMIM9-202ENST00000478043 GPCPD1Q9NPB8 672 aa9.83□□□□□ -0.84
SMIM9-202ENST00000478043 SLC27A5Q9Y2P5 690 aa9.83□□□□□ -0.84
SMIM9-202ENST00000478043 NR1I2O75469 434 aa9.82□□□□□ -0.84
SMIM9-202ENST00000478043 ATP6V1AP38606 617 aa9.82□□□□□ -0.84
SMIM9-202ENST00000478043 MORN1Q5T089 497 aa9.82□□□□□ -0.84
SMIM9-202ENST00000478043 BCANQ96GW7 911 aa9.82□□□□□ -0.84
SMIM9-202ENST00000478043 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
SMIM9-202ENST00000478043 S1PR4O95977 384 aa9.81□□□□□ -0.84
SMIM9-202ENST00000478043 SSTR3P32745 418 aaPredicted RBP9.81□□□□□ -0.84
SMIM9-202ENST00000478043 CLCN1P35523 988 aa9.81□□□□□ -0.84
SMIM9-202ENST00000478043 TRIM66O15016 1216 aa9.8□□□□□ -0.84
SMIM9-202ENST00000478043 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
SMIM9-202ENST00000478043 RNF223E7ERA6 249 aa9.79□□□□□ -0.84
SMIM9-202ENST00000478043 PRKD2Q9BZL6 878 aa9.79□□□□□ -0.84
SMIM9-202ENST00000478043 KDM4AO75164 1064 aa9.78□□□□□ -0.84
SMIM9-202ENST00000478043 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
SMIM9-202ENST00000478043 AK7Q96M32 723 aa9.78□□□□□ -0.84
SMIM9-202ENST00000478043 SPSB2Q99619 263 aa9.78□□□□□ -0.84
SMIM9-202ENST00000478043 RGS20O76081 388 aa9.76□□□□□ -0.85
SMIM9-202ENST00000478043 ADH1BP00325 375 aa9.76□□□□□ -0.85
SMIM9-202ENST00000478043 GIGYF2Q6Y7W6 1299 aaKnown RBP9.76□□□□□ -0.85
SMIM9-202ENST00000478043 RNF19BQ6ZMZ0 732 aa9.76□□□□□ -0.85
SMIM9-202ENST00000478043 THAP11Q96EK4 314 aa9.76□□□□□ -0.85
SMIM9-202ENST00000478043 GGCXP38435 758 aa9.75□□□□□ -0.85
SMIM9-202ENST00000478043 FAM160A2Q8N612 972 aaPredicted RBP9.75□□□□□ -0.85
SMIM9-202ENST00000478043 SLC6A16Q9GZN6 736 aa9.75□□□□□ -0.85
SMIM9-202ENST00000478043 AMHR2Q16671 573 aa9.74□□□□□ -0.85
SMIM9-202ENST00000478043 BRICD5Q6PL45 260 aa9.74□□□□□ -0.85
SMIM9-202ENST00000478043 PARP9Q8IXQ6 854 aa9.74□□□□□ -0.85
SMIM9-202ENST00000478043 SYMPKQ92797 1274 aaKnown RBP9.74□□□□□ -0.85
SMIM9-202ENST00000478043 EMID1Q96A84 441 aaPredicted RBP9.74□□□□□ -0.85
SMIM9-202ENST00000478043 NUTM1Q86Y26 1132 aa9.73□□□□□ -0.85
SMIM9-202ENST00000478043 PRDM9Q9NQV7 894 aa9.73□□□□□ -0.85
SMIM9-202ENST00000478043 FMNL1O95466 1100 aaPredicted RBP9.72□□□□□ -0.85
SMIM9-202ENST00000478043 NDUFV2P19404 249 aa9.72□□□□□ -0.85
SMIM9-202ENST00000478043 GRIPAP1Q4V328 841 aa9.72□□□□□ -0.85
SMIM9-202ENST00000478043 HOXA2O43364 376 aa9.71□□□□□ -0.86
SMIM9-202ENST00000478043 MS4A1P11836 297 aa9.71□□□□□ -0.86
SMIM9-202ENST00000478043 PDE4DQ08499 809 aa9.71□□□□□ -0.86
SMIM9-202ENST00000478043 PLA2G2CQ5R387 149 aa9.71□□□□□ -0.86
SMIM9-202ENST00000478043 IRX2Q9BZI1 471 aaPredicted RBP9.71□□□□□ -0.86
SMIM9-202ENST00000478043 LIAT1Q6ZQX7 453 aa9.7□□□□□ -0.86
SMIM9-202ENST00000478043 SPIRE2Q8WWL2 714 aa9.7□□□□□ -0.86
SMIM9-202ENST00000478043 BEGAINQ9BUH8 593 aa9.7□□□□□ -0.86
SMIM9-202ENST00000478043 SLC19A1P41440 591 aa9.69□□□□□ -0.86
SMIM9-202ENST00000478043 MOXD2PA6NHM9 499 aa9.67□□□□□ -0.86
SMIM9-202ENST00000478043 USP46P62068 366 aa9.67□□□□□ -0.86
SMIM9-202ENST00000478043 ANKLE1Q8NAG6 615 aa9.67□□□□□ -0.86
SMIM9-202ENST00000478043 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
SMIM9-202ENST00000478043 GFRA3O60609 400 aa9.65□□□□□ -0.86
SMIM9-202ENST00000478043 FCF1Q9Y324 198 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms