RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 PXYLP1Q8TE99 480 aa11.58□□□□□ -0.56
LMBR1-216ENST00000477983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.57□□□□□ -0.56
LMBR1-216ENST00000477983 GNPATO15228 680 aa11.57□□□□□ -0.56
LMBR1-216ENST00000477983 ZNF516Q92618 1163 aa11.56□□□□□ -0.56
LMBR1-216ENST00000477983 PRR14Q9BWN1 585 aa11.56□□□□□ -0.56
LMBR1-216ENST00000477983 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
LMBR1-216ENST00000477983 FECHP22830 423 aa11.54□□□□□ -0.56
LMBR1-216ENST00000477983 METTL3Q86U44 580 aaKnown RBP11.53□□□□□ -0.56
LMBR1-216ENST00000477983 SLC10A3P09131 477 aa11.5□□□□□ -0.57
LMBR1-216ENST00000477983 ACTN4O43707 911 aaKnown RBP11.49□□□□□ -0.57
LMBR1-216ENST00000477983 ZPR1O75312 459 aa11.49□□□□□ -0.57
LMBR1-216ENST00000477983 COPS2P61201 443 aa11.49□□□□□ -0.57
LMBR1-216ENST00000477983 PPP1R18Q6NYC8 613 aa11.49□□□□□ -0.57
LMBR1-216ENST00000477983 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
LMBR1-216ENST00000477983 KMT5BQ4FZB7 885 aa11.48□□□□□ -0.57
LMBR1-216ENST00000477983 GPIHBP1Q8IV16 184 aa11.48□□□□□ -0.57
LMBR1-216ENST00000477983 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
LMBR1-216ENST00000477983 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
LMBR1-216ENST00000477983 CFHP08603 1231 aa11.45□□□□□ -0.58
LMBR1-216ENST00000477983 BLOC1S3Q6QNY0 202 aa11.45□□□□□ -0.58
LMBR1-216ENST00000477983 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
LMBR1-216ENST00000477983 RSPH4AQ5TD94 716 aa11.43□□□□□ -0.58
LMBR1-216ENST00000477983 TMUB1Q9BVT8 246 aa11.43□□□□□ -0.58
LMBR1-216ENST00000477983 TULP1O00294 542 aaPredicted RBP11.41□□□□□ -0.58
LMBR1-216ENST00000477983 PHOX2BQ99453 314 aa11.41□□□□□ -0.58
LMBR1-216ENST00000477983 GGCXP38435 758 aa11.4□□□□□ -0.58
LMBR1-216ENST00000477983 V9GY48 417 aaPredicted RBP11.4□□□□□ -0.58
LMBR1-216ENST00000477983 PRKD2Q9BZL6 878 aa11.39□□□□□ -0.59
LMBR1-216ENST00000477983 NR1I2O75469 434 aa11.36□□□□□ -0.59
LMBR1-216ENST00000477983 MAP2K5Q13163 448 aa11.36□□□□□ -0.59
LMBR1-216ENST00000477983 Q6ZNB5 142 aa11.35□□□□□ -0.59
LMBR1-216ENST00000477983 SCUBE3Q8IX30 993 aa11.35□□□□□ -0.59
LMBR1-216ENST00000477983 NLRP7Q8WX94 980 aa11.35□□□□□ -0.59
LMBR1-216ENST00000477983 IRF6O14896 467 aa11.34□□□□□ -0.59
LMBR1-216ENST00000477983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.34□□□□□ -0.59
LMBR1-216ENST00000477983 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
LMBR1-216ENST00000477983 DDX11L8A8MPP1 907 aa11.33□□□□□ -0.6
LMBR1-216ENST00000477983 TLL1O43897 1013 aa11.33□□□□□ -0.6
LMBR1-216ENST00000477983 RDH13Q8NBN7 331 aa11.33□□□□□ -0.6
LMBR1-216ENST00000477983 MINK1Q8N4C8 1332 aaPredicted RBP11.33□□□□□ -0.6
LMBR1-216ENST00000477983 RNF223E7ERA6 249 aa11.32□□□□□ -0.6
LMBR1-216ENST00000477983 GCGRP47871 477 aa11.32□□□□□ -0.6
LMBR1-216ENST00000477983 LAPTM4AQ15012 233 aa11.32□□□□□ -0.6
LMBR1-216ENST00000477983 ADH1BP00325 375 aa11.31□□□□□ -0.6
LMBR1-216ENST00000477983 PUS10Q3MIT2 529 aaKnown RBP11.3□□□□□ -0.6
LMBR1-216ENST00000477983 ATP6V1AP38606 617 aa11.29□□□□□ -0.6
LMBR1-216ENST00000477983 MORN1Q5T089 497 aa11.29□□□□□ -0.6
LMBR1-216ENST00000477983 ANKLE1Q8NAG6 615 aa11.29□□□□□ -0.6
LMBR1-216ENST00000477983 S1PR4O95977 384 aa11.28□□□□□ -0.6
LMBR1-216ENST00000477983 FUT2Q10981 343 aa11.28□□□□□ -0.6
LMBR1-216ENST00000477983 GFRA3O60609 400 aa11.27□□□□□ -0.61
LMBR1-216ENST00000477983 EMID1Q96A84 441 aaPredicted RBP11.27□□□□□ -0.61
LMBR1-216ENST00000477983 SLC6A16Q9GZN6 736 aa11.26□□□□□ -0.61
LMBR1-216ENST00000477983 CD46P15529 392 aa11.25□□□□□ -0.61
LMBR1-216ENST00000477983 THAP11Q96EK4 314 aa11.25□□□□□ -0.61
LMBR1-216ENST00000477983 SPSB2Q99619 263 aa11.25□□□□□ -0.61
LMBR1-216ENST00000477983 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
LMBR1-216ENST00000477983 PPEF1O14829 653 aaPredicted RBP11.24□□□□□ -0.61
LMBR1-216ENST00000477983 SLC19A1P41440 591 aa11.24□□□□□ -0.61
LMBR1-216ENST00000477983 NRG2O14511 850 aaPredicted RBP11.23□□□□□ -0.61
LMBR1-216ENST00000477983 CCDC102AQ96A19 550 aa11.23□□□□□ -0.61
LMBR1-216ENST00000477983 SLC27A5Q9Y2P5 690 aa11.23□□□□□ -0.61
LMBR1-216ENST00000477983 LMOD2Q6P5Q4 547 aa11.22□□□□□ -0.61
LMBR1-216ENST00000477983 GRIPAP1Q4V328 841 aa11.21□□□□□ -0.61
LMBR1-216ENST00000477983 SPRYD7Q5W111 196 aa11.21□□□□□ -0.61
LMBR1-216ENST00000477983 MDM2Q00987 491 aaPredicted RBP11.2□□□□□ -0.62
LMBR1-216ENST00000477983 BRICD5Q6PL45 260 aa11.2□□□□□ -0.62
LMBR1-216ENST00000477983 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
LMBR1-216ENST00000477983 FMNL1O95466 1100 aaPredicted RBP11.19□□□□□ -0.62
LMBR1-216ENST00000477983 ZNF598Q86UK7 904 aaKnown RBP11.19□□□□□ -0.62
LMBR1-216ENST00000477983 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
LMBR1-216ENST00000477983 FAM160A2Q8N612 972 aaPredicted RBP11.18□□□□□ -0.62
LMBR1-216ENST00000477983 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
LMBR1-216ENST00000477983 LCE2BO14633 110 aa11.17□□□□□ -0.62
LMBR1-216ENST00000477983 PLA2G2CQ5R387 149 aa11.17□□□□□ -0.62
LMBR1-216ENST00000477983 GPCPD1Q9NPB8 672 aa11.17□□□□□ -0.62
LMBR1-216ENST00000477983 KDM4AO75164 1064 aa11.16□□□□□ -0.62
LMBR1-216ENST00000477983 ZMYND10O75800 440 aa11.16□□□□□ -0.62
LMBR1-216ENST00000477983 CLCN1P35523 988 aa11.16□□□□□ -0.62
LMBR1-216ENST00000477983 TRIM67Q6ZTA4 783 aa11.16□□□□□ -0.62
LMBR1-216ENST00000477983 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
LMBR1-216ENST00000477983 USP46P62068 366 aa11.14□□□□□ -0.63
LMBR1-216ENST00000477983 MSS51Q4VC12 460 aa11.14□□□□□ -0.63
LMBR1-216ENST00000477983 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
LMBR1-216ENST00000477983 PRR20EP86478 221 aa11.13□□□□□ -0.63
LMBR1-216ENST00000477983 PRR20CP86479 221 aa11.13□□□□□ -0.63
LMBR1-216ENST00000477983 PRR20DP86480 221 aa11.13□□□□□ -0.63
LMBR1-216ENST00000477983 PRR20BP86481 221 aa11.13□□□□□ -0.63
LMBR1-216ENST00000477983 PRR20AP86496 221 aa11.13□□□□□ -0.63
LMBR1-216ENST00000477983 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
LMBR1-216ENST00000477983 ZC3H15Q8WU90 426 aaKnown RBP11.13□□□□□ -0.63
LMBR1-216ENST00000477983 Q3C1V9 767 aa11.12□□□□□ -0.63
LMBR1-216ENST00000477983 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
LMBR1-216ENST00000477983 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
LMBR1-216ENST00000477983 GDF9O60383 454 aa11.1□□□□□ -0.63
LMBR1-216ENST00000477983 RPIAP49247 311 aa11.1□□□□□ -0.63
LMBR1-216ENST00000477983 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
LMBR1-216ENST00000477983 FCF1Q9Y324 198 aaKnown RBP11.09□□□□□ -0.63
LMBR1-216ENST00000477983 HOXA2O43364 376 aa11.08□□□□□ -0.64
LMBR1-216ENST00000477983 MMP16P51512 607 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms