RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 METRNQ9UJH8 293 aa10.45□□□□□ -0.74
LINC00173-202ENST00000477702 PLCH2O75038 1416 aa10.44□□□□□ -0.74
LINC00173-202ENST00000477702 SEC24BO95487 1268 aa10.44□□□□□ -0.74
LINC00173-202ENST00000477702 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
LINC00173-202ENST00000477702 EFCAB2Q5VUJ9 269 aa10.43□□□□□ -0.74
LINC00173-202ENST00000477702 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
LINC00173-202ENST00000477702 C7P10643 843 aa10.41□□□□□ -0.74
LINC00173-202ENST00000477702 DIP2CQ9Y2E4 1556 aa10.4□□□□□ -0.74
LINC00173-202ENST00000477702 CDK13Q14004 1512 aaKnown RBP10.4□□□□□ -0.74
LINC00173-202ENST00000477702 TOM1O60784 492 aa10.4□□□□□ -0.74
LINC00173-202ENST00000477702 ZNF518AQ6AHZ1 1483 aa10.4□□□□□ -0.74
LINC00173-202ENST00000477702 BOLA1Q9Y3E2 137 aa10.39□□□□□ -0.75
LINC00173-202ENST00000477702 ABCA6Q8N139 1617 aa10.37□□□□□ -0.75
LINC00173-202ENST00000477702 KDM5CP41229 1560 aa10.37□□□□□ -0.75
LINC00173-202ENST00000477702 NPATQ14207 1427 aa10.36□□□□□ -0.75
LINC00173-202ENST00000477702 CNTLNQ9NXG0 1405 aa10.36□□□□□ -0.75
LINC00173-202ENST00000477702 TMEM121BQ9BXQ6 578 aaPredicted RBP10.36□□□□□ -0.75
LINC00173-202ENST00000477702 RGS17Q9UGC6 210 aaPredicted RBP10.36□□□□□ -0.75
LINC00173-202ENST00000477702 ATP1B4Q9UN42 357 aaPredicted RBP10.36□□□□□ -0.75
LINC00173-202ENST00000477702 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
LINC00173-202ENST00000477702 REREQ9P2R6 1566 aa10.35□□□□□ -0.75
LINC00173-202ENST00000477702 AGLP35573 1532 aa10.35□□□□□ -0.75
LINC00173-202ENST00000477702 ARHGAP5Q13017 1502 aa10.35□□□□□ -0.75
LINC00173-202ENST00000477702 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
LINC00173-202ENST00000477702 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
LINC00173-202ENST00000477702 MYO5CQ9NQX4 1742 aa10.35□□□□□ -0.75
LINC00173-202ENST00000477702 TCOF1Q13428 1488 aaKnown RBP10.35□□□□□ -0.75
LINC00173-202ENST00000477702 PLA2R1Q13018 1463 aa10.34□□□□□ -0.75
LINC00173-202ENST00000477702 WDR70Q9NW82 654 aa10.33□□□□□ -0.76
LINC00173-202ENST00000477702 MLH3Q9UHC1 1453 aa10.33□□□□□ -0.76
LINC00173-202ENST00000477702 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
LINC00173-202ENST00000477702 KIF14Q15058 1648 aa10.32□□□□□ -0.76
LINC00173-202ENST00000477702 MYO3AQ8NEV4 1616 aa10.32□□□□□ -0.76
LINC00173-202ENST00000477702 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
LINC00173-202ENST00000477702 SHANK2Q9UPX8 1470 aa10.31□□□□□ -0.76
LINC00173-202ENST00000477702 G3V3G9 751 aa10.31□□□□□ -0.76
LINC00173-202ENST00000477702 PDE4AP27815 886 aa10.31□□□□□ -0.76
LINC00173-202ENST00000477702 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
LINC00173-202ENST00000477702 SUPT6HQ7KZ85 1726 aaKnown RBP10.3□□□□□ -0.76
LINC00173-202ENST00000477702 ALKQ9UM73 1620 aa10.3□□□□□ -0.76
LINC00173-202ENST00000477702 CPS1P31327 1500 aa10.3□□□□□ -0.76
LINC00173-202ENST00000477702 PTPRKQ15262 1439 aa10.3□□□□□ -0.76
LINC00173-202ENST00000477702 ZNF142P52746 1687 aaPredicted RBP10.29□□□□□ -0.76
LINC00173-202ENST00000477702 POTEB2H3BUK9 544 aa10.29□□□□□ -0.76
LINC00173-202ENST00000477702 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
LINC00173-202ENST00000477702 KCNV2Q8TDN2 545 aa10.29□□□□□ -0.76
LINC00173-202ENST00000477702 MROH2AA6NES4 1674 aa10.28□□□□□ -0.76
LINC00173-202ENST00000477702 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
LINC00173-202ENST00000477702 MFSD10Q14728 455 aa10.28□□□□□ -0.76
LINC00173-202ENST00000477702 CLTCQ00610 1675 aaKnown RBP10.28□□□□□ -0.76
LINC00173-202ENST00000477702 KIDINS220Q9ULH0 1771 aa10.27□□□□□ -0.77
LINC00173-202ENST00000477702 C2orf72A6NCS6 295 aa10.27□□□□□ -0.77
LINC00173-202ENST00000477702 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
LINC00173-202ENST00000477702 GPHNQ9NQX3 736 aaPredicted RBP10.27□□□□□ -0.77
LINC00173-202ENST00000477702 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.77
LINC00173-202ENST00000477702 DSG2Q14126 1118 aa10.26□□□□□ -0.77
LINC00173-202ENST00000477702 GGT6Q6P531 493 aa10.26□□□□□ -0.77
LINC00173-202ENST00000477702 TMC2Q8TDI7 906 aa10.25□□□□□ -0.77
LINC00173-202ENST00000477702 NEURL4Q96JN8 1562 aa10.25□□□□□ -0.77
LINC00173-202ENST00000477702 TROQ12816 1431 aaPredicted RBP10.24□□□□□ -0.77
LINC00173-202ENST00000477702 A2ML1A8K2U0 1454 aa10.24□□□□□ -0.77
LINC00173-202ENST00000477702 ABCC1P33527 1531 aa10.24□□□□□ -0.77
LINC00173-202ENST00000477702 VWDEQ8N2E2 1590 aa10.24□□□□□ -0.77
LINC00173-202ENST00000477702 KIF3CO14782 793 aa10.24□□□□□ -0.77
LINC00173-202ENST00000477702 PPP1R15BQ5SWA1 713 aa10.24□□□□□ -0.77
LINC00173-202ENST00000477702 BCANQ96GW7 911 aa10.24□□□□□ -0.77
LINC00173-202ENST00000477702 DNMT1P26358 1616 aaKnown RBP10.24□□□□□ -0.77
LINC00173-202ENST00000477702 CDC42BPBQ9Y5S2 1711 aa10.24□□□□□ -0.77
LINC00173-202ENST00000477702 ITSN2Q9NZM3 1697 aa10.23□□□□□ -0.77
LINC00173-202ENST00000477702 E2F4Q16254 413 aa10.23□□□□□ -0.77
LINC00173-202ENST00000477702 ZNF777Q9ULD5 760 aaPredicted RBP10.23□□□□□ -0.77
LINC00173-202ENST00000477702 CLIP1P30622 1438 aa10.23□□□□□ -0.77
LINC00173-202ENST00000477702 SETD1AO15047 1707 aaKnown RBP10.22□□□□□ -0.77
LINC00173-202ENST00000477702 FBXO31Q5XUX0 539 aaPredicted RBP10.22□□□□□ -0.77
LINC00173-202ENST00000477702 ANKLE2Q86XL3 938 aa10.22□□□□□ -0.77
LINC00173-202ENST00000477702 SPAG9O60271 1321 aaKnown RBP10.22□□□□□ -0.77
LINC00173-202ENST00000477702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC00173-202ENST00000477702 POLR1AO95602 1720 aaPredicted RBP10.21□□□□□ -0.77
LINC00173-202ENST00000477702 C3orf67Q6ZVT6 689 aa10.21□□□□□ -0.77
LINC00173-202ENST00000477702 SAMD9LQ8IVG5 1584 aa10.21□□□□□ -0.78
LINC00173-202ENST00000477702 HNRNPMP52272 730 aaKnown RBP eCLIP10.2□□□□□ -0.78
LINC00173-202ENST00000477702 LRRC7Q96NW7 1537 aa10.2□□□□□ -0.78
LINC00173-202ENST00000477702 PREX2Q70Z35 1606 aa10.19□□□□□ -0.78
LINC00173-202ENST00000477702 SRCAPQ6ZRS2 3230 aa10.19□□□□□ -0.78
LINC00173-202ENST00000477702 NPHP4O75161 1426 aaPredicted RBP10.19□□□□□ -0.78
LINC00173-202ENST00000477702 TNRQ92752 1358 aa10.19□□□□□ -0.78
LINC00173-202ENST00000477702 FOXK1P85037 733 aa10.19□□□□□ -0.78
LINC00173-202ENST00000477702 PLPP6Q8IY26 295 aa10.19□□□□□ -0.78
LINC00173-202ENST00000477702 A2MP01023 1474 aa10.18□□□□□ -0.78
LINC00173-202ENST00000477702 FMN1Q68DA7 1419 aa10.17□□□□□ -0.78
LINC00173-202ENST00000477702 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
LINC00173-202ENST00000477702 CAMK2BQ13554 666 aa10.17□□□□□ -0.78
LINC00173-202ENST00000477702 NBR1Q14596 966 aa10.17□□□□□ -0.78
LINC00173-202ENST00000477702 EMILIN3Q9NT22 766 aa10.17□□□□□ -0.78
LINC00173-202ENST00000477702 RNF17Q9BXT8 1623 aaKnown RBP10.17□□□□□ -0.78
LINC00173-202ENST00000477702 THEMISQ8N1K5 641 aaPredicted RBP10.16□□□□□ -0.78
LINC00173-202ENST00000477702 UPF1Q92900 1129 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINC00173-202ENST00000477702 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.16□□□□□ -0.78
LINC00173-202ENST00000477702 PLXNC1O60486 1568 aa10.16□□□□□ -0.78
LINC00173-202ENST00000477702 ATP7AQ04656 1500 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms