RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SPHKAPQ2M3C7 1700 aa11.05□□□□□ -0.64
VMA21-203ENST00000477649 CARD11Q9BXL7 1154 aa11.05□□□□□ -0.64
VMA21-203ENST00000477649 FRMPD1Q5SYB0 1578 aa11.04□□□□□ -0.64
VMA21-203ENST00000477649 REREQ9P2R6 1566 aa11.04□□□□□ -0.64
VMA21-203ENST00000477649 ARHGAP31Q2M1Z3 1444 aa11.04□□□□□ -0.64
VMA21-203ENST00000477649 WASHC2AQ641Q2 1341 aa11.04□□□□□ -0.64
VMA21-203ENST00000477649 DIP2CQ9Y2E4 1556 aa11.03□□□□□ -0.64
VMA21-203ENST00000477649 CNTLNQ9NXG0 1405 aa11.03□□□□□ -0.64
VMA21-203ENST00000477649 ABCA6Q8N139 1617 aa11.03□□□□□ -0.64
VMA21-203ENST00000477649 ZC3H13Q5T200 1668 aaKnown RBP11.02□□□□□ -0.64
VMA21-203ENST00000477649 RAPGEF3O95398 923 aa11.02□□□□□ -0.65
VMA21-203ENST00000477649 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.65
VMA21-203ENST00000477649 AGLP35573 1532 aa11.02□□□□□ -0.65
VMA21-203ENST00000477649 CEP152O94986 1710 aa11.01□□□□□ -0.65
VMA21-203ENST00000477649 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
VMA21-203ENST00000477649 HIRIP3Q9BW71 556 aaPredicted RBP11.01□□□□□ -0.65
VMA21-203ENST00000477649 KDM2AQ9Y2K7 1162 aa11.01□□□□□ -0.65
VMA21-203ENST00000477649 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
VMA21-203ENST00000477649 WASHC2CQ9Y4E1 1318 aa11.01□□□□□ -0.65
VMA21-203ENST00000477649 TRPM1Q7Z4N2 1603 aa11.01□□□□□ -0.65
VMA21-203ENST00000477649 MYOM2P54296 1465 aa11□□□□□ -0.65
VMA21-203ENST00000477649 ABCC3O15438 1527 aa11□□□□□ -0.65
VMA21-203ENST00000477649 RGL3Q3MIN7 710 aa11□□□□□ -0.65
VMA21-203ENST00000477649 CLTCL1P53675 1640 aa10.99□□□□□ -0.65
VMA21-203ENST00000477649 PPRC1Q5VV67 1664 aaKnown RBP10.99□□□□□ -0.65
VMA21-203ENST00000477649 KIF7Q2M1P5 1343 aa10.99□□□□□ -0.65
VMA21-203ENST00000477649 GGT6Q6P531 493 aa10.98□□□□□ -0.65
VMA21-203ENST00000477649 NOS1P29475 1434 aa10.98□□□□□ -0.65
VMA21-203ENST00000477649 NPATQ14207 1427 aa10.98□□□□□ -0.65
VMA21-203ENST00000477649 SLC52A1Q9NWF4 448 aa10.97□□□□□ -0.65
VMA21-203ENST00000477649 KIAA1210Q9ULL0 1709 aa10.97□□□□□ -0.65
VMA21-203ENST00000477649 KIF13AQ9H1H9 1805 aa10.96□□□□□ -0.65
VMA21-203ENST00000477649 YEATS2Q9ULM3 1422 aa10.96□□□□□ -0.65
VMA21-203ENST00000477649 KTN1Q86UP2 1357 aaKnown RBP10.96□□□□□ -0.65
VMA21-203ENST00000477649 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
VMA21-203ENST00000477649 MADDQ8WXG6 1647 aa10.95□□□□□ -0.66
VMA21-203ENST00000477649 EIF3AQ14152 1382 aaKnown RBP10.95□□□□□ -0.66
VMA21-203ENST00000477649 SPDYE2BA6NHP3 402 aa10.95□□□□□ -0.66
VMA21-203ENST00000477649 SPDYE6P0CI01 402 aa10.95□□□□□ -0.66
VMA21-203ENST00000477649 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
VMA21-203ENST00000477649 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
VMA21-203ENST00000477649 CLEC11AQ9Y240 323 aa10.95□□□□□ -0.66
VMA21-203ENST00000477649 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
VMA21-203ENST00000477649 ADGRB3O60242 1522 aa10.94□□□□□ -0.66
VMA21-203ENST00000477649 KIF1BO60333 1816 aa10.94□□□□□ -0.66
VMA21-203ENST00000477649 ST20-MTHFSA0A0A6YYL1 179 aa10.94□□□□□ -0.66
VMA21-203ENST00000477649 SCAF11Q99590 1463 aaKnown RBP10.93□□□□□ -0.66
VMA21-203ENST00000477649 NRXN1Q9ULB1 1477 aa10.93□□□□□ -0.66
VMA21-203ENST00000477649 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
VMA21-203ENST00000477649 TMF1P82094 1093 aa10.92□□□□□ -0.66
VMA21-203ENST00000477649 ARHGEF40Q8TER5 1519 aa10.92□□□□□ -0.66
VMA21-203ENST00000477649 ZFYVE9O95405 1425 aa10.92□□□□□ -0.66
VMA21-203ENST00000477649 PIK3C2BO00750 1634 aa10.91□□□□□ -0.66
VMA21-203ENST00000477649 COL17A1Q9UMD9 1497 aaPredicted RBP10.9□□□□□ -0.66
VMA21-203ENST00000477649 POTEMA6NI47 508 aa10.9□□□□□ -0.66
VMA21-203ENST00000477649 VGFO15240 615 aaPredicted RBP10.9□□□□□ -0.66
VMA21-203ENST00000477649 NBPF1Q3BBV0 1214 aa10.9□□□□□ -0.66
VMA21-203ENST00000477649 YTHDC1Q96MU7 727 aaKnown RBP10.9□□□□□ -0.66
VMA21-203ENST00000477649 PRKRIP1Q9H875 184 aaPredicted RBP10.9□□□□□ -0.66
VMA21-203ENST00000477649 SETBP1Q9Y6X0 1596 aa10.9□□□□□ -0.67
VMA21-203ENST00000477649 TESK2Q96S53 571 aa10.89□□□□□ -0.67
VMA21-203ENST00000477649 TSPOAP1O95153 1857 aa10.88□□□□□ -0.67
VMA21-203ENST00000477649 IFT172Q9UG01 1749 aa10.88□□□□□ -0.67
VMA21-203ENST00000477649 IQGAP1P46940 1657 aa10.88□□□□□ -0.67
VMA21-203ENST00000477649 SBNO2Q9Y2G9 1366 aa10.88□□□□□ -0.67
VMA21-203ENST00000477649 PIK3C2GO75747 1445 aa10.87□□□□□ -0.67
VMA21-203ENST00000477649 RALBP1Q15311 655 aa10.87□□□□□ -0.67
VMA21-203ENST00000477649 UGGT1Q9NYU2 1555 aa10.86□□□□□ -0.67
VMA21-203ENST00000477649 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
VMA21-203ENST00000477649 C14orf93Q9H972 538 aaKnown RBP10.86□□□□□ -0.67
VMA21-203ENST00000477649 ERVK-7P63135 1459 aa10.86□□□□□ -0.67
VMA21-203ENST00000477649 SYNMO15061 1565 aa10.86□□□□□ -0.67
VMA21-203ENST00000477649 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
VMA21-203ENST00000477649 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
VMA21-203ENST00000477649 PREX1Q8TCU6 1659 aa10.85□□□□□ -0.67
VMA21-203ENST00000477649 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
VMA21-203ENST00000477649 IDI1Q13907 227 aa10.84□□□□□ -0.67
VMA21-203ENST00000477649 PUS7Q96PZ0 661 aaKnown RBP10.84□□□□□ -0.67
VMA21-203ENST00000477649 SPATA31D1Q6ZQQ2 1576 aa10.84□□□□□ -0.67
VMA21-203ENST00000477649 PPLO60437 1756 aa10.84□□□□□ -0.67
VMA21-203ENST00000477649 MROH2AA6NES4 1674 aa10.83□□□□□ -0.68
VMA21-203ENST00000477649 CLCN6P51797 869 aa10.83□□□□□ -0.68
VMA21-203ENST00000477649 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
VMA21-203ENST00000477649 OTUD5Q96G74 571 aa10.83□□□□□ -0.68
VMA21-203ENST00000477649 SIGLEC1Q9BZZ2 1709 aa10.82□□□□□ -0.68
VMA21-203ENST00000477649 KDM4FA0A1W2PPD8 638 aa10.82□□□□□ -0.68
VMA21-203ENST00000477649 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
VMA21-203ENST00000477649 CFAP70Q5T0N1 1121 aa10.82□□□□□ -0.68
VMA21-203ENST00000477649 POLR3GLQ9BT43 218 aa10.82□□□□□ -0.68
VMA21-203ENST00000477649 NEXMIFQ5QGS0 1516 aa10.82□□□□□ -0.68
VMA21-203ENST00000477649 MYO3AQ8NEV4 1616 aa10.81□□□□□ -0.68
VMA21-203ENST00000477649 TMEM131LA2VDJ0 1609 aa10.8□□□□□ -0.68
VMA21-203ENST00000477649 BRD4O60885 1362 aaPredicted RBP10.8□□□□□ -0.68
VMA21-203ENST00000477649 DISP3Q9P2K9 1392 aa10.8□□□□□ -0.68
VMA21-203ENST00000477649 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.8□□□□□ -0.68
VMA21-203ENST00000477649 MRS2Q9HD23 443 aa10.8□□□□□ -0.68
VMA21-203ENST00000477649 MYBBP1AQ9BQG0 1328 aaKnown RBP10.8□□□□□ -0.68
VMA21-203ENST00000477649 CENPJQ9HC77 1338 aaPredicted RBP10.8□□□□□ -0.68
VMA21-203ENST00000477649 NPC1L1Q9UHC9 1359 aa10.79□□□□□ -0.68
VMA21-203ENST00000477649 ADGRB1O14514 1584 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms