RNA–Protein interactions for RNA: ENST00000477148.1

TFRC-212, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 570 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-212ENST00000477148 CLCN1P35523 988 aa12.99□□□□□ -0.33
TFRC-212ENST00000477148 MDM2Q00987 491 aaPredicted RBP12.99□□□□□ -0.33
TFRC-212ENST00000477148 AMHR2Q16671 573 aa12.99□□□□□ -0.33
TFRC-212ENST00000477148 RNF166Q96A37 237 aaPredicted RBP12.99□□□□□ -0.33
TFRC-212ENST00000477148 SOWAHBA6NEL2 793 aa12.98□□□□□ -0.33
TFRC-212ENST00000477148 RNF40O75150 1001 aa12.98□□□□□ -0.33
TFRC-212ENST00000477148 TTLL12Q14166 644 aaPredicted RBP12.98□□□□□ -0.33
TFRC-212ENST00000477148 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
TFRC-212ENST00000477148 DAXXQ9UER7 740 aaPredicted RBP12.98□□□□□ -0.33
TFRC-212ENST00000477148 BCAMP50895 628 aa12.96□□□□□ -0.33
TFRC-212ENST00000477148 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
TFRC-212ENST00000477148 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
TFRC-212ENST00000477148 PDE4DQ08499 809 aa12.95□□□□□ -0.34
TFRC-212ENST00000477148 NECTIN2Q92692 538 aa12.95□□□□□ -0.34
TFRC-212ENST00000477148 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
TFRC-212ENST00000477148 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
TFRC-212ENST00000477148 SULF1Q8IWU6 871 aa12.93□□□□□ -0.34
TFRC-212ENST00000477148 HPS5Q9UPZ3 1129 aa12.93□□□□□ -0.34
TFRC-212ENST00000477148 PARP9Q8IXQ6 854 aa12.91□□□□□ -0.34
TFRC-212ENST00000477148 TSR3Q9UJK0 312 aaKnown RBP12.91□□□□□ -0.34
TFRC-212ENST00000477148 DDX11L8A8MPP1 907 aa12.9□□□□□ -0.34
TFRC-212ENST00000477148 PPP4CP60510 307 aa12.9□□□□□ -0.34
TFRC-212ENST00000477148 PTPN5P54829 565 aa12.89□□□□□ -0.35
TFRC-212ENST00000477148 GIGYF2Q6Y7W6 1299 aaKnown RBP12.89□□□□□ -0.35
TFRC-212ENST00000477148 RDH13Q8NBN7 331 aa12.89□□□□□ -0.35
TFRC-212ENST00000477148 TMUB1Q9BVT8 246 aa12.89□□□□□ -0.35
TFRC-212ENST00000477148 REPIN1Q9BWE0 567 aaKnown RBP12.87□□□□□ -0.35
TFRC-212ENST00000477148 FAM217BQ9NTX9 383 aaPredicted RBP12.87□□□□□ -0.35
TFRC-212ENST00000477148 HCSTQ9UBK5 93 aa12.86□□□□□ -0.35
TFRC-212ENST00000477148 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
TFRC-212ENST00000477148 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
TFRC-212ENST00000477148 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
TFRC-212ENST00000477148 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
TFRC-212ENST00000477148 SLC10A3P09131 477 aa12.83□□□□□ -0.36
TFRC-212ENST00000477148 KMT5BQ4FZB7 885 aa12.83□□□□□ -0.36
TFRC-212ENST00000477148 PRR14Q9BWN1 585 aa12.83□□□□□ -0.36
TFRC-212ENST00000477148 CFHP08603 1231 aa12.82□□□□□ -0.36
TFRC-212ENST00000477148 CD46P15529 392 aa12.81□□□□□ -0.36
TFRC-212ENST00000477148 GPBP1L1Q9HC44 474 aaPredicted RBP12.81□□□□□ -0.36
TFRC-212ENST00000477148 KDM4CQ9H3R0 1056 aa12.8□□□□□ -0.36
TFRC-212ENST00000477148 PLSCR2Q9NRY7 297 aa12.8□□□□□ -0.36
TFRC-212ENST00000477148 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
TFRC-212ENST00000477148 MS4A1P11836 297 aa12.77□□□□□ -0.37
TFRC-212ENST00000477148 GCGRP47871 477 aa12.77□□□□□ -0.37
TFRC-212ENST00000477148 APLP1P51693 650 aa12.76□□□□□ -0.37
TFRC-212ENST00000477148 BEGAINQ9BUH8 593 aa12.76□□□□□ -0.37
TFRC-212ENST00000477148 ACTN4O43707 911 aaKnown RBP12.74□□□□□ -0.37
TFRC-212ENST00000477148 NUTM1Q86Y26 1132 aa12.73□□□□□ -0.37
TFRC-212ENST00000477148 KDM4AO75164 1064 aa12.72□□□□□ -0.37
TFRC-212ENST00000477148 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
TFRC-212ENST00000477148 USP46P62068 366 aa12.71□□□□□ -0.37
TFRC-212ENST00000477148 PCDHB3Q9Y5E6 796 aa12.71□□□□□ -0.37
TFRC-212ENST00000477148 GRIPAP1Q4V328 841 aa12.7□□□□□ -0.38
TFRC-212ENST00000477148 FUT2Q10981 343 aa12.69□□□□□ -0.38
TFRC-212ENST00000477148 DIXDC1Q155Q3 683 aa12.69□□□□□ -0.38
TFRC-212ENST00000477148 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
TFRC-212ENST00000477148 FAM117AQ9C073 453 aa12.67□□□□□ -0.38
TFRC-212ENST00000477148 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
TFRC-212ENST00000477148 TBC1D2Q9BYX2 928 aa12.65□□□□□ -0.38
TFRC-212ENST00000477148 HOXA2O43364 376 aa12.63□□□□□ -0.39
TFRC-212ENST00000477148 NR1I2O75469 434 aa12.63□□□□□ -0.39
TFRC-212ENST00000477148 COPS2P61201 443 aa12.63□□□□□ -0.39
TFRC-212ENST00000477148 PUS10Q3MIT2 529 aaKnown RBP12.63□□□□□ -0.39
TFRC-212ENST00000477148 BLOC1S3Q6QNY0 202 aa12.63□□□□□ -0.39
TFRC-212ENST00000477148 MTRQ99707 1265 aa12.63□□□□□ -0.39
TFRC-212ENST00000477148 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
TFRC-212ENST00000477148 IL21Q9HBE4 155 aa12.63□□□□□ -0.39
TFRC-212ENST00000477148 NISCHQ9Y2I1 1504 aa12.62□□□□□ -0.39
TFRC-212ENST00000477148 MORN1Q5T089 497 aa12.61□□□□□ -0.39
TFRC-212ENST00000477148 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
TFRC-212ENST00000477148 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
TFRC-212ENST00000477148 TJAP1Q5JTD0 557 aa12.6□□□□□ -0.39
TFRC-212ENST00000477148 ITGBL1O95965 494 aaPredicted RBP12.58□□□□□ -0.4
TFRC-212ENST00000477148 KCNC4Q03721 635 aa12.58□□□□□ -0.4
TFRC-212ENST00000477148 MOXD2PA6NHM9 499 aa12.57□□□□□ -0.4
TFRC-212ENST00000477148 FDX1P10109 184 aa12.57□□□□□ -0.4
TFRC-212ENST00000477148 MYSM1Q5VVJ2 828 aa12.57□□□□□ -0.4
TFRC-212ENST00000477148 SLC27A5Q9Y2P5 690 aa12.57□□□□□ -0.4
TFRC-212ENST00000477148 ZPR1O75312 459 aa12.56□□□□□ -0.4
TFRC-212ENST00000477148 Q3C1V9 767 aa12.56□□□□□ -0.4
TFRC-212ENST00000477148 SCUBE3Q8IX30 993 aa12.56□□□□□ -0.4
TFRC-212ENST00000477148 NDUFV2P19404 249 aa12.55□□□□□ -0.4
TFRC-212ENST00000477148 GJA5P36382 358 aa12.55□□□□□ -0.4
TFRC-212ENST00000477148 SH3D19Q5HYK7 790 aa12.55□□□□□ -0.4
TFRC-212ENST00000477148 HLA-CQ95604 372 aa12.55□□□□□ -0.4
TFRC-212ENST00000477148 SPTLC1O15269 473 aa12.54□□□□□ -0.4
TFRC-212ENST00000477148 GUCA2AQ02747 115 aa12.54□□□□□ -0.4
TFRC-212ENST00000477148 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
TFRC-212ENST00000477148 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
TFRC-212ENST00000477148 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
TFRC-212ENST00000477148 ZNF516Q92618 1163 aa12.53□□□□□ -0.4
TFRC-212ENST00000477148 PLA2G2EQ9NZK7 142 aa12.53□□□□□ -0.4
TFRC-212ENST00000477148 FMNL1O95466 1100 aaPredicted RBP12.52□□□□□ -0.41
TFRC-212ENST00000477148 POLR3EQ9NVU0 708 aa12.52□□□□□ -0.41
TFRC-212ENST00000477148 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.41
TFRC-212ENST00000477148 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
TFRC-212ENST00000477148 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
TFRC-212ENST00000477148 GOPCQ9HD26 462 aa12.5□□□□□ -0.41
TFRC-212ENST00000477148 TLL1O43897 1013 aa12.49□□□□□ -0.41
TFRC-212ENST00000477148 LIMD1Q9UGP4 676 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms