RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 METTL3Q86U44 580 aaKnown RBP11.51□□□□□ -0.57
CDKN1B-204ENST00000477087 KCNC4Q03721 635 aa11.5□□□□□ -0.57
CDKN1B-204ENST00000477087 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDKN1B-204ENST00000477087 PRR14Q9BWN1 585 aa11.49□□□□□ -0.57
CDKN1B-204ENST00000477087 APLP1P51693 650 aa11.48□□□□□ -0.57
CDKN1B-204ENST00000477087 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
CDKN1B-204ENST00000477087 MAP2K5Q13163 448 aa11.46□□□□□ -0.57
CDKN1B-204ENST00000477087 KMT5BQ4FZB7 885 aa11.45□□□□□ -0.58
CDKN1B-204ENST00000477087 RSPH4AQ5TD94 716 aa11.45□□□□□ -0.58
CDKN1B-204ENST00000477087 A0A0G2JS52 829 aa11.44□□□□□ -0.58
CDKN1B-204ENST00000477087 MTRQ99707 1265 aa11.44□□□□□ -0.58
CDKN1B-204ENST00000477087 IL21Q9HBE4 155 aa11.44□□□□□ -0.58
CDKN1B-204ENST00000477087 TJAP1Q5JTD0 557 aa11.42□□□□□ -0.58
CDKN1B-204ENST00000477087 SLC24A1O60721 1099 aa11.41□□□□□ -0.58
CDKN1B-204ENST00000477087 CFHP08603 1231 aa11.41□□□□□ -0.58
CDKN1B-204ENST00000477087 DAXXQ9UER7 740 aaPredicted RBP11.41□□□□□ -0.58
CDKN1B-204ENST00000477087 MINK1Q8N4C8 1332 aaPredicted RBP11.4□□□□□ -0.58
CDKN1B-204ENST00000477087 PCDHB3Q9Y5E6 796 aa11.4□□□□□ -0.58
CDKN1B-204ENST00000477087 COPS2P61201 443 aa11.39□□□□□ -0.59
CDKN1B-204ENST00000477087 RDH13Q8NBN7 331 aa11.39□□□□□ -0.59
CDKN1B-204ENST00000477087 NLRP7Q8WX94 980 aa11.39□□□□□ -0.59
CDKN1B-204ENST00000477087 IRF6O14896 467 aa11.38□□□□□ -0.59
CDKN1B-204ENST00000477087 SLC10A3P09131 477 aa11.38□□□□□ -0.59
CDKN1B-204ENST00000477087 DDX11L8A8MPP1 907 aa11.37□□□□□ -0.59
CDKN1B-204ENST00000477087 ACTN4O43707 911 aaKnown RBP11.37□□□□□ -0.59
CDKN1B-204ENST00000477087 SULF1Q8IWU6 871 aa11.37□□□□□ -0.59
CDKN1B-204ENST00000477087 PHOX2BQ99453 314 aa11.37□□□□□ -0.59
CDKN1B-204ENST00000477087 KRI1Q8N9T8 703 aaKnown RBP11.36□□□□□ -0.59
CDKN1B-204ENST00000477087 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
CDKN1B-204ENST00000477087 RGS20O76081 388 aa11.35□□□□□ -0.59
CDKN1B-204ENST00000477087 ZNF516Q92618 1163 aa11.35□□□□□ -0.59
CDKN1B-204ENST00000477087 BLOC1S3Q6QNY0 202 aa11.33□□□□□ -0.6
CDKN1B-204ENST00000477087 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
CDKN1B-204ENST00000477087 ZPR1O75312 459 aa11.32□□□□□ -0.6
CDKN1B-204ENST00000477087 NR1I2O75469 434 aa11.29□□□□□ -0.6
CDKN1B-204ENST00000477087 ZMYND10O75800 440 aa11.29□□□□□ -0.6
CDKN1B-204ENST00000477087 MDM2Q00987 491 aaPredicted RBP11.29□□□□□ -0.6
CDKN1B-204ENST00000477087 BARGINQ6ZT62 677 aa11.29□□□□□ -0.6
CDKN1B-204ENST00000477087 GGCXP38435 758 aa11.28□□□□□ -0.6
CDKN1B-204ENST00000477087 NKX2-3Q8TAU0 364 aa11.27□□□□□ -0.61
CDKN1B-204ENST00000477087 CLCN1P35523 988 aa11.26□□□□□ -0.61
CDKN1B-204ENST00000477087 GCGRP47871 477 aa11.26□□□□□ -0.61
CDKN1B-204ENST00000477087 PPP1R18Q6NYC8 613 aa11.26□□□□□ -0.61
CDKN1B-204ENST00000477087 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
CDKN1B-204ENST00000477087 PUS10Q3MIT2 529 aaKnown RBP11.25□□□□□ -0.61
CDKN1B-204ENST00000477087 BCANQ96GW7 911 aa11.25□□□□□ -0.61
CDKN1B-204ENST00000477087 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.25□□□□□ -0.61
CDKN1B-204ENST00000477087 TLL1O43897 1013 aa11.24□□□□□ -0.61
CDKN1B-204ENST00000477087 CD46P15529 392 aa11.23□□□□□ -0.61
CDKN1B-204ENST00000477087 ATP6V1AP38606 617 aa11.23□□□□□ -0.61
CDKN1B-204ENST00000477087 FUT2Q10981 343 aa11.23□□□□□ -0.61
CDKN1B-204ENST00000477087 GRIPAP1Q4V328 841 aa11.23□□□□□ -0.61
CDKN1B-204ENST00000477087 CCDC180Q9P1Z9 1646 aa11.23□□□□□ -0.61
CDKN1B-204ENST00000477087 SCUBE3Q8IX30 993 aa11.21□□□□□ -0.61
CDKN1B-204ENST00000477087 ADH1BP00325 375 aa11.2□□□□□ -0.62
CDKN1B-204ENST00000477087 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
CDKN1B-204ENST00000477087 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
CDKN1B-204ENST00000477087 MORN1Q5T089 497 aa11.19□□□□□ -0.62
CDKN1B-204ENST00000477087 FAM217BQ9NTX9 383 aaPredicted RBP11.18□□□□□ -0.62
CDKN1B-204ENST00000477087 KDM4AO75164 1064 aa11.16□□□□□ -0.62
CDKN1B-204ENST00000477087 AK7Q96M32 723 aa11.16□□□□□ -0.62
CDKN1B-204ENST00000477087 SPSB2Q99619 263 aa11.16□□□□□ -0.62
CDKN1B-204ENST00000477087 SLC6A16Q9GZN6 736 aa11.16□□□□□ -0.62
CDKN1B-204ENST00000477087 FMNL1O95466 1100 aaPredicted RBP11.15□□□□□ -0.62
CDKN1B-204ENST00000477087 S1PR4O95977 384 aa11.15□□□□□ -0.62
CDKN1B-204ENST00000477087 AMHR2Q16671 573 aa11.15□□□□□ -0.62
CDKN1B-204ENST00000477087 PRKD2Q9BZL6 878 aa11.15□□□□□ -0.62
CDKN1B-204ENST00000477087 SLC27A5Q9Y2P5 690 aa11.15□□□□□ -0.62
CDKN1B-204ENST00000477087 USP46P62068 366 aa11.14□□□□□ -0.63
CDKN1B-204ENST00000477087 IRX2Q9BZI1 471 aaPredicted RBP11.14□□□□□ -0.63
CDKN1B-204ENST00000477087 RNF223E7ERA6 249 aa11.13□□□□□ -0.63
CDKN1B-204ENST00000477087 NUTM1Q86Y26 1132 aa11.13□□□□□ -0.63
CDKN1B-204ENST00000477087 REPIN1Q9BWE0 567 aaKnown RBP11.13□□□□□ -0.63
CDKN1B-204ENST00000477087 SSTR3P32745 418 aaPredicted RBP11.12□□□□□ -0.63
CDKN1B-204ENST00000477087 TRIM66O15016 1216 aa11.11□□□□□ -0.63
CDKN1B-204ENST00000477087 Q3C1V9 767 aa11.11□□□□□ -0.63
CDKN1B-204ENST00000477087 V9GY48 417 aaPredicted RBP11.11□□□□□ -0.63
CDKN1B-204ENST00000477087 PPEF1O14829 653 aaPredicted RBP11.1□□□□□ -0.63
CDKN1B-204ENST00000477087 GIGYF2Q6Y7W6 1299 aaKnown RBP11.1□□□□□ -0.63
CDKN1B-204ENST00000477087 ANKLE1Q8NAG6 615 aa11.1□□□□□ -0.63
CDKN1B-204ENST00000477087 SALL2Q9Y467 1007 aaPredicted RBP11.1□□□□□ -0.63
CDKN1B-204ENST00000477087 THAP11Q96EK4 314 aa11.09□□□□□ -0.63
CDKN1B-204ENST00000477087 SLC24A3Q9HC58 644 aa11.09□□□□□ -0.63
CDKN1B-204ENST00000477087 HOXA2O43364 376 aa11.08□□□□□ -0.64
CDKN1B-204ENST00000477087 BRICD5Q6PL45 260 aa11.07□□□□□ -0.64
CDKN1B-204ENST00000477087 RNF19BQ6ZMZ0 732 aa11.07□□□□□ -0.64
CDKN1B-204ENST00000477087 PARP9Q8IXQ6 854 aa11.06□□□□□ -0.64
CDKN1B-204ENST00000477087 SLC19A1P41440 591 aa11.05□□□□□ -0.64
CDKN1B-204ENST00000477087 MSS51Q4VC12 460 aa11.04□□□□□ -0.64
CDKN1B-204ENST00000477087 HLA-CQ95604 372 aa11.04□□□□□ -0.64
CDKN1B-204ENST00000477087 PDE4DQ08499 809 aa11.03□□□□□ -0.64
CDKN1B-204ENST00000477087 FAM160A2Q8N612 972 aaPredicted RBP11.03□□□□□ -0.64
CDKN1B-204ENST00000477087 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
CDKN1B-204ENST00000477087 GUCA2AQ02747 115 aa11.02□□□□□ -0.65
CDKN1B-204ENST00000477087 SPIRE2Q8WWL2 714 aa11.02□□□□□ -0.65
CDKN1B-204ENST00000477087 PRDM9Q9NQV7 894 aa11.02□□□□□ -0.65
CDKN1B-204ENST00000477087 USB1Q9BQ65 265 aaKnown RBP11.01□□□□□ -0.65
CDKN1B-204ENST00000477087 FDX1P10109 184 aa11□□□□□ -0.65
CDKN1B-204ENST00000477087 LAPTM4AQ15012 233 aa11□□□□□ -0.65
CDKN1B-204ENST00000477087 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms