RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 NCLP19338 710 aaKnown RBP12.3□□□□□ -0.44
GSDMB-208ENST00000477054 RTF1Q92541 710 aaKnown RBP12.3□□□□□ -0.44
GSDMB-208ENST00000477054 RUNDC1Q96C34 613 aa12.3□□□□□ -0.44
GSDMB-208ENST00000477054 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
GSDMB-208ENST00000477054 LMOD3Q0VAK6 560 aa12.29□□□□□ -0.44
GSDMB-208ENST00000477054 SCAPERQ9BY12 1400 aa12.29□□□□□ -0.44
GSDMB-208ENST00000477054 SOX12O15370 315 aa12.29□□□□□ -0.44
GSDMB-208ENST00000477054 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
GSDMB-208ENST00000477054 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
GSDMB-208ENST00000477054 ZKSCAN2Q63HK3 967 aa12.28□□□□□ -0.44
GSDMB-208ENST00000477054 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
GSDMB-208ENST00000477054 KIAA0556O60303 1618 aa12.28□□□□□ -0.44
GSDMB-208ENST00000477054 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
GSDMB-208ENST00000477054 COG6Q9Y2V7 657 aa12.28□□□□□ -0.44
GSDMB-208ENST00000477054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.28□□□□□ -0.44
GSDMB-208ENST00000477054 PODXL2Q9NZ53 605 aa12.27□□□□□ -0.44
GSDMB-208ENST00000477054 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.45
GSDMB-208ENST00000477054 MINK1Q8N4C8 1332 aaPredicted RBP12.27□□□□□ -0.45
GSDMB-208ENST00000477054 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
GSDMB-208ENST00000477054 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
GSDMB-208ENST00000477054 SLKQ9H2G2 1235 aaPredicted RBP12.25□□□□□ -0.45
GSDMB-208ENST00000477054 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
GSDMB-208ENST00000477054 AAMPQ13685 434 aa12.25□□□□□ -0.45
GSDMB-208ENST00000477054 MFAP1P55081 439 aaKnown RBP12.24□□□□□ -0.45
GSDMB-208ENST00000477054 BRPF3Q9ULD4 1205 aa12.24□□□□□ -0.45
GSDMB-208ENST00000477054 DIAPH1O60610 1272 aaKnown RBP12.24□□□□□ -0.45
GSDMB-208ENST00000477054 TMEM132EQ6IEE7 984 aa12.23□□□□□ -0.45
GSDMB-208ENST00000477054 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
GSDMB-208ENST00000477054 ATP10BO94823 1461 aa12.23□□□□□ -0.45
GSDMB-208ENST00000477054 RALGAPBQ86X10 1494 aa12.22□□□□□ -0.45
GSDMB-208ENST00000477054 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
GSDMB-208ENST00000477054 COG3Q96JB2 828 aa12.22□□□□□ -0.45
GSDMB-208ENST00000477054 DDX19BQ9UMR2 479 aa12.21□□□□□ -0.45
GSDMB-208ENST00000477054 EID1Q9Y6B2 187 aa12.21□□□□□ -0.45
GSDMB-208ENST00000477054 MCCP23508 829 aa12.21□□□□□ -0.45
GSDMB-208ENST00000477054 OS9Q13438 667 aaPredicted RBP12.21□□□□□ -0.45
GSDMB-208ENST00000477054 DZIP1LQ8IYY4 767 aaKnown RBP12.21□□□□□ -0.45
GSDMB-208ENST00000477054 MTHFSP49914 203 aa12.2□□□□□ -0.46
GSDMB-208ENST00000477054 DNMT1P26358 1616 aaKnown RBP12.2□□□□□ -0.46
GSDMB-208ENST00000477054 PTMSP20962 102 aa12.2□□□□□ -0.46
GSDMB-208ENST00000477054 RIPK4P57078 832 aa12.2□□□□□ -0.46
GSDMB-208ENST00000477054 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
GSDMB-208ENST00000477054 PBRM1Q86U86 1689 aa12.2□□□□□ -0.46
GSDMB-208ENST00000477054 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
GSDMB-208ENST00000477054 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
GSDMB-208ENST00000477054 TCP11L2Q8N4U5 519 aa12.19□□□□□ -0.46
GSDMB-208ENST00000477054 STK31Q9BXU1 1019 aa12.19□□□□□ -0.46
GSDMB-208ENST00000477054 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
GSDMB-208ENST00000477054 CYB5RLQ6IPT4 315 aa12.19□□□□□ -0.46
GSDMB-208ENST00000477054 APBB1O00213 710 aa12.19□□□□□ -0.46
GSDMB-208ENST00000477054 HMMRO75330 724 aa12.19□□□□□ -0.46
GSDMB-208ENST00000477054 SHANK2Q9UPX8 1470 aa12.18□□□□□ -0.46
GSDMB-208ENST00000477054 SLC4A3P48751 1232 aa12.18□□□□□ -0.46
GSDMB-208ENST00000477054 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
GSDMB-208ENST00000477054 GGNBP2Q9H3C7 697 aa12.18□□□□□ -0.46
GSDMB-208ENST00000477054 DISP1Q96F81 1524 aa12.18□□□□□ -0.46
GSDMB-208ENST00000477054 CDK11BP21127 795 aaKnown RBP12.17□□□□□ -0.46
GSDMB-208ENST00000477054 PDE3AQ14432 1141 aa12.17□□□□□ -0.46
GSDMB-208ENST00000477054 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
GSDMB-208ENST00000477054 PANK1Q8TE04 598 aa12.17□□□□□ -0.46
GSDMB-208ENST00000477054 NGDNQ8NEJ9 315 aaKnown RBP12.17□□□□□ -0.46
GSDMB-208ENST00000477054 KIF16BQ96L93 1317 aa12.17□□□□□ -0.46
GSDMB-208ENST00000477054 SLC12A5Q9H2X9 1139 aa12.17□□□□□ -0.46
GSDMB-208ENST00000477054 MSNP26038 577 aaKnown RBP12.16□□□□□ -0.46
GSDMB-208ENST00000477054 NINLQ9Y2I6 1382 aa12.16□□□□□ -0.46
GSDMB-208ENST00000477054 NFKBIBQ15653 356 aa12.16□□□□□ -0.46
GSDMB-208ENST00000477054 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
GSDMB-208ENST00000477054 AMPHP49418 695 aa12.15□□□□□ -0.46
GSDMB-208ENST00000477054 PZPP20742 1482 aa12.15□□□□□ -0.46
GSDMB-208ENST00000477054 SLC52A1Q9NWF4 448 aa12.15□□□□□ -0.46
GSDMB-208ENST00000477054 ELL2O00472 640 aaPredicted RBP12.14□□□□□ -0.47
GSDMB-208ENST00000477054 FAM69CQ0P6D2 419 aa12.14□□□□□ -0.47
GSDMB-208ENST00000477054 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
GSDMB-208ENST00000477054 ARHGEF12Q9NZN5 1544 aa12.14□□□□□ -0.47
GSDMB-208ENST00000477054 FAM135AQ9P2D6 1515 aa12.14□□□□□ -0.47
GSDMB-208ENST00000477054 ADGRL1O94910 1474 aa12.14□□□□□ -0.47
GSDMB-208ENST00000477054 SCAF11Q99590 1463 aaKnown RBP12.14□□□□□ -0.47
GSDMB-208ENST00000477054 ADGRL2O95490 1459 aa12.14□□□□□ -0.47
GSDMB-208ENST00000477054 GCC2Q8IWJ2 1684 aa12.14□□□□□ -0.47
GSDMB-208ENST00000477054 MAGI3Q5TCQ9 1506 aa12.14□□□□□ -0.47
GSDMB-208ENST00000477054 DUOX2Q9NRD8 1548 aa12.14□□□□□ -0.47
GSDMB-208ENST00000477054 DISP3Q9P2K9 1392 aa12.13□□□□□ -0.47
GSDMB-208ENST00000477054 PTMAP06454 111 aaKnown RBP12.13□□□□□ -0.47
GSDMB-208ENST00000477054 ANKRD45Q5TZF3 282 aa12.13□□□□□ -0.47
GSDMB-208ENST00000477054 PRAG1Q86YV5 1406 aa12.13□□□□□ -0.47
GSDMB-208ENST00000477054 GNAI1P63096 354 aa12.13□□□□□ -0.47
GSDMB-208ENST00000477054 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
GSDMB-208ENST00000477054 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
GSDMB-208ENST00000477054 SLFN5Q08AF3 891 aa12.13□□□□□ -0.47
GSDMB-208ENST00000477054 API5Q9BZZ5 524 aaKnown RBP12.13□□□□□ -0.47
GSDMB-208ENST00000477054 KCNJ4P48050 445 aa12.13□□□□□ -0.47
GSDMB-208ENST00000477054 NUP160Q12769 1436 aa12.13□□□□□ -0.47
GSDMB-208ENST00000477054 SYCP2Q9BX26 1530 aa12.12□□□□□ -0.47
GSDMB-208ENST00000477054 RRP9O43818 475 aaKnown RBP12.12□□□□□ -0.47
GSDMB-208ENST00000477054 BCAR3O75815 825 aa12.12□□□□□ -0.47
GSDMB-208ENST00000477054 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
GSDMB-208ENST00000477054 PLCH2O75038 1416 aa12.12□□□□□ -0.47
GSDMB-208ENST00000477054 TEX14Q8IWB6 1497 aa12.12□□□□□ -0.47
GSDMB-208ENST00000477054 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
GSDMB-208ENST00000477054 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms