RNA–Protein interactions for RNA: ENST00000476650.2

ALMS1-203, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 239 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-203ENST00000476650 TMEM134Q9H6X4 195 aa8.43□□□□□ -1.06
ALMS1-203ENST00000476650 RGS20O76081 388 aa8.42□□□□□ -1.06
ALMS1-203ENST00000476650 OATP04181 439 aa8.42□□□□□ -1.06
ALMS1-203ENST00000476650 ZNF516Q92618 1163 aa8.42□□□□□ -1.06
ALMS1-203ENST00000476650 FECHP22830 423 aa8.41□□□□□ -1.06
ALMS1-203ENST00000476650 PRR14Q9BWN1 585 aa8.41□□□□□ -1.06
ALMS1-203ENST00000476650 PCDHB3Q9Y5E6 796 aa8.41□□□□□ -1.06
ALMS1-203ENST00000476650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.4□□□□□ -1.06
ALMS1-203ENST00000476650 CFHP08603 1231 aa8.39□□□□□ -1.07
ALMS1-203ENST00000476650 KMT5BQ4FZB7 885 aa8.39□□□□□ -1.07
ALMS1-203ENST00000476650 PXYLP1Q8TE99 480 aa8.39□□□□□ -1.07
ALMS1-203ENST00000476650 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
ALMS1-203ENST00000476650 METTL3Q86U44 580 aaKnown RBP8.38□□□□□ -1.07
ALMS1-203ENST00000476650 NKX2-3Q8TAU0 364 aa8.38□□□□□ -1.07
ALMS1-203ENST00000476650 RSPH4AQ5TD94 716 aa8.37□□□□□ -1.07
ALMS1-203ENST00000476650 PPP1R18Q6NYC8 613 aa8.37□□□□□ -1.07
ALMS1-203ENST00000476650 NLRP7Q8WX94 980 aa8.37□□□□□ -1.07
ALMS1-203ENST00000476650 GPR37O15354 613 aa8.36□□□□□ -1.07
ALMS1-203ENST00000476650 BLOC1S3Q6QNY0 202 aa8.36□□□□□ -1.07
ALMS1-203ENST00000476650 ZPR1O75312 459 aa8.35□□□□□ -1.07
ALMS1-203ENST00000476650 RDH13Q8NBN7 331 aa8.35□□□□□ -1.07
ALMS1-203ENST00000476650 SLC10A3P09131 477 aa8.34□□□□□ -1.07
ALMS1-203ENST00000476650 GGCXP38435 758 aa8.34□□□□□ -1.07
ALMS1-203ENST00000476650 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.34□□□□□ -1.07
ALMS1-203ENST00000476650 DDX11L8A8MPP1 907 aa8.33□□□□□ -1.08
ALMS1-203ENST00000476650 ACTN4O43707 911 aaKnown RBP8.33□□□□□ -1.08
ALMS1-203ENST00000476650 PRKD2Q9BZL6 878 aa8.33□□□□□ -1.08
ALMS1-203ENST00000476650 TLL1O43897 1013 aa8.32□□□□□ -1.08
ALMS1-203ENST00000476650 DAXXQ9UER7 740 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-203ENST00000476650 PUS10Q3MIT2 529 aaKnown RBP8.3□□□□□ -1.08
ALMS1-203ENST00000476650 NR1I2O75469 434 aa8.29□□□□□ -1.08
ALMS1-203ENST00000476650 PHOX2BQ99453 314 aa8.28□□□□□ -1.08
ALMS1-203ENST00000476650 Q6ZNB5 142 aa8.27□□□□□ -1.09
ALMS1-203ENST00000476650 SULF1Q8IWU6 871 aa8.27□□□□□ -1.09
ALMS1-203ENST00000476650 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
ALMS1-203ENST00000476650 GFRA3O60609 400 aa8.25□□□□□ -1.09
ALMS1-203ENST00000476650 S1PR4O95977 384 aa8.25□□□□□ -1.09
ALMS1-203ENST00000476650 SCUBE3Q8IX30 993 aa8.25□□□□□ -1.09
ALMS1-203ENST00000476650 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
ALMS1-203ENST00000476650 PPEF1O14829 653 aaPredicted RBP8.24□□□□□ -1.09
ALMS1-203ENST00000476650 FUT2Q10981 343 aa8.24□□□□□ -1.09
ALMS1-203ENST00000476650 TMUB1Q9BVT8 246 aa8.24□□□□□ -1.09
ALMS1-203ENST00000476650 IRF6O14896 467 aa8.23□□□□□ -1.09
ALMS1-203ENST00000476650 ADH1BP00325 375 aa8.23□□□□□ -1.09
ALMS1-203ENST00000476650 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
ALMS1-203ENST00000476650 SLC6A16Q9GZN6 736 aa8.23□□□□□ -1.09
ALMS1-203ENST00000476650 V9GY48 417 aaPredicted RBP8.23□□□□□ -1.09
ALMS1-203ENST00000476650 LMOD2Q6P5Q4 547 aa8.22□□□□□ -1.09
ALMS1-203ENST00000476650 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.22□□□□□ -1.09
ALMS1-203ENST00000476650 KRI1Q8N9T8 703 aaKnown RBP8.22□□□□□ -1.09
ALMS1-203ENST00000476650 SPSB2Q99619 263 aa8.22□□□□□ -1.09
ALMS1-203ENST00000476650 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
ALMS1-203ENST00000476650 ATP6V1AP38606 617 aa8.21□□□□□ -1.1
ALMS1-203ENST00000476650 GCGRP47871 477 aa8.21□□□□□ -1.1
ALMS1-203ENST00000476650 CCDC102AQ96A19 550 aa8.21□□□□□ -1.1
ALMS1-203ENST00000476650 SLC19A1P41440 591 aa8.2□□□□□ -1.1
ALMS1-203ENST00000476650 LAPTM4AQ15012 233 aa8.19□□□□□ -1.1
ALMS1-203ENST00000476650 GRIPAP1Q4V328 841 aa8.19□□□□□ -1.1
ALMS1-203ENST00000476650 MORN1Q5T089 497 aa8.19□□□□□ -1.1
ALMS1-203ENST00000476650 ANKLE1Q8NAG6 615 aa8.19□□□□□ -1.1
ALMS1-203ENST00000476650 SLC27A5Q9Y2P5 690 aa8.19□□□□□ -1.1
ALMS1-203ENST00000476650 FMNL1O95466 1100 aaPredicted RBP8.17□□□□□ -1.1
ALMS1-203ENST00000476650 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
ALMS1-203ENST00000476650 CD46P15529 392 aa8.15□□□□□ -1.1
ALMS1-203ENST00000476650 GPCPD1Q9NPB8 672 aa8.15□□□□□ -1.1
ALMS1-203ENST00000476650 NRG2O14511 850 aaPredicted RBP8.14□□□□□ -1.11
ALMS1-203ENST00000476650 KDM4AO75164 1064 aa8.14□□□□□ -1.11
ALMS1-203ENST00000476650 CLCN1P35523 988 aa8.14□□□□□ -1.11
ALMS1-203ENST00000476650 LIAT1Q6ZQX7 453 aa8.14□□□□□ -1.11
ALMS1-203ENST00000476650 SPRYD7Q5W111 196 aa8.13□□□□□ -1.11
ALMS1-203ENST00000476650 RNF19BQ6ZMZ0 732 aa8.13□□□□□ -1.11
ALMS1-203ENST00000476650 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
ALMS1-203ENST00000476650 ZNF697Q5TEC3 545 aa8.12□□□□□ -1.11
ALMS1-203ENST00000476650 ZC3H15Q8WU90 426 aaKnown RBP8.12□□□□□ -1.11
ALMS1-203ENST00000476650 EMID1Q96A84 441 aaPredicted RBP8.12□□□□□ -1.11
ALMS1-203ENST00000476650 THAP11Q96EK4 314 aa8.12□□□□□ -1.11
ALMS1-203ENST00000476650 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
ALMS1-203ENST00000476650 FCF1Q9Y324 198 aaKnown RBP8.12□□□□□ -1.11
ALMS1-203ENST00000476650 Q3C1V9 767 aa8.11□□□□□ -1.11
ALMS1-203ENST00000476650 PLA2G2CQ5R387 149 aa8.11□□□□□ -1.11
ALMS1-203ENST00000476650 BRICD5Q6PL45 260 aa8.11□□□□□ -1.11
ALMS1-203ENST00000476650 TRAF7Q6Q0C0 670 aa8.11□□□□□ -1.11
ALMS1-203ENST00000476650 ZNF598Q86UK7 904 aaKnown RBP8.11□□□□□ -1.11
ALMS1-203ENST00000476650 NUTM1Q86Y26 1132 aa8.11□□□□□ -1.11
ALMS1-203ENST00000476650 TNFRSF10AO00220 468 aa8.1□□□□□ -1.11
ALMS1-203ENST00000476650 FAM160A2Q8N612 972 aaPredicted RBP8.1□□□□□ -1.11
ALMS1-203ENST00000476650 HLA-CQ95604 372 aa8.1□□□□□ -1.11
ALMS1-203ENST00000476650 FOXC1Q12948 553 aa8.09□□□□□ -1.11
ALMS1-203ENST00000476650 BARGINQ6ZT62 677 aa8.09□□□□□ -1.11
ALMS1-203ENST00000476650 FAM217BQ9NTX9 383 aaPredicted RBP8.09□□□□□ -1.11
ALMS1-203ENST00000476650 ZBTB24O43167 697 aaPredicted RBP8.08□□□□□ -1.12
ALMS1-203ENST00000476650 ZMYND10O75800 440 aa8.08□□□□□ -1.12
ALMS1-203ENST00000476650 USP46P62068 366 aa8.08□□□□□ -1.12
ALMS1-203ENST00000476650 GUCA2AQ02747 115 aa8.08□□□□□ -1.12
ALMS1-203ENST00000476650 SALL2Q9Y467 1007 aaPredicted RBP8.08□□□□□ -1.12
ALMS1-203ENST00000476650 HOXA2O43364 376 aa8.07□□□□□ -1.12
ALMS1-203ENST00000476650 SSTR3P32745 418 aaPredicted RBP8.07□□□□□ -1.12
ALMS1-203ENST00000476650 REPIN1Q9BWE0 567 aaKnown RBP8.07□□□□□ -1.12
ALMS1-203ENST00000476650 MSS51Q4VC12 460 aa8.06□□□□□ -1.12
ALMS1-203ENST00000476650 PKDCCQ504Y2 493 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms