RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 PRR20EP86478 221 aa14.13□□□□□ -0.15
NUP58-209ENST00000476553 PRR20CP86479 221 aa14.13□□□□□ -0.15
NUP58-209ENST00000476553 PRR20DP86480 221 aa14.13□□□□□ -0.15
NUP58-209ENST00000476553 PRR20BP86481 221 aa14.13□□□□□ -0.15
NUP58-209ENST00000476553 PRR20AP86496 221 aa14.13□□□□□ -0.15
NUP58-209ENST00000476553 PAXIP1Q6ZW49 1069 aaPredicted RBP14.13□□□□□ -0.15
NUP58-209ENST00000476553 SPRYD7Q5W111 196 aa14.12□□□□□ -0.15
NUP58-209ENST00000476553 ANKLE1Q8NAG6 615 aa14.12□□□□□ -0.15
NUP58-209ENST00000476553 TMEM134Q9H6X4 195 aa14.12□□□□□ -0.15
NUP58-209ENST00000476553 PTGDRQ13258 359 aa14.11□□□□□ -0.15
NUP58-209ENST00000476553 CFAP44Q96MT7 982 aa14.11□□□□□ -0.15
NUP58-209ENST00000476553 ZNF598Q86UK7 904 aaKnown RBP14.1□□□□□ -0.15
NUP58-209ENST00000476553 ACTN4O43707 911 aaKnown RBP14.09□□□□□ -0.15
NUP58-209ENST00000476553 MLLT3P42568 568 aaPredicted RBP14.09□□□□□ -0.15
NUP58-209ENST00000476553 MYT1Q01538 1121 aa14.09□□□□□ -0.15
NUP58-209ENST00000476553 DGAT1O75907 488 aa14.08□□□□□ -0.16
NUP58-209ENST00000476553 ADGRG1Q9Y653 693 aa14.08□□□□□ -0.16
NUP58-209ENST00000476553 S1PR4O95977 384 aa14.07□□□□□ -0.16
NUP58-209ENST00000476553 PKDCCQ504Y2 493 aa14.07□□□□□ -0.16
NUP58-209ENST00000476553 KMT5BQ4FZB7 885 aa14.06□□□□□ -0.16
NUP58-209ENST00000476553 RBM46Q8TBY0 533 aaKnown RBP14.06□□□□□ -0.16
NUP58-209ENST00000476553 LIAT1Q6ZQX7 453 aa14.05□□□□□ -0.16
NUP58-209ENST00000476553 CFHP08603 1231 aa14.04□□□□□ -0.16
NUP58-209ENST00000476553 PPEF1O14829 653 aaPredicted RBP14.03□□□□□ -0.16
NUP58-209ENST00000476553 ADH1BP00325 375 aa14.03□□□□□ -0.16
NUP58-209ENST00000476553 ZNF697Q5TEC3 545 aa14.03□□□□□ -0.16
NUP58-209ENST00000476553 ARHGEF1Q92888 912 aaKnown RBP14.03□□□□□ -0.16
NUP58-209ENST00000476553 RCCD1A6NED2 376 aa14.02□□□□□ -0.17
NUP58-209ENST00000476553 GDF9O60383 454 aa14.01□□□□□ -0.17
NUP58-209ENST00000476553 POTECB2RU33 542 aa13.98□□□□□ -0.17
NUP58-209ENST00000476553 SLC10A3P09131 477 aa13.98□□□□□ -0.17
NUP58-209ENST00000476553 PLA2G2CQ5R387 149 aa13.97□□□□□ -0.17
NUP58-209ENST00000476553 KCNV2Q8TDN2 545 aa13.97□□□□□ -0.17
NUP58-209ENST00000476553 FAM187AA6NFU0 413 aa13.96□□□□□ -0.17
NUP58-209ENST00000476553 TNFRSF10AO00220 468 aa13.96□□□□□ -0.17
NUP58-209ENST00000476553 NR1I2O75469 434 aa13.96□□□□□ -0.17
NUP58-209ENST00000476553 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
NUP58-209ENST00000476553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
NUP58-209ENST00000476553 SLC6A16Q9GZN6 736 aa13.93□□□□□ -0.18
NUP58-209ENST00000476553 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
NUP58-209ENST00000476553 ST8SIA5O15466 376 aa13.88□□□□□ -0.19
NUP58-209ENST00000476553 AMER1Q5JTC6 1135 aaPredicted RBP13.88□□□□□ -0.19
NUP58-209ENST00000476553 LMOD2Q6P5Q4 547 aa13.88□□□□□ -0.19
NUP58-209ENST00000476553 PXYLP1Q8TE99 480 aa13.88□□□□□ -0.19
NUP58-209ENST00000476553 AAASQ9NRG9 546 aa13.88□□□□□ -0.19
NUP58-209ENST00000476553 LCE2AQ5TA79 106 aaPredicted RBP13.87□□□□□ -0.19
NUP58-209ENST00000476553 SCUBE3Q8IX30 993 aa13.87□□□□□ -0.19
NUP58-209ENST00000476553 PKD2L1Q9P0L9 805 aa13.87□□□□□ -0.19
NUP58-209ENST00000476553 FCHSD2O94868 740 aa13.86□□□□□ -0.19
NUP58-209ENST00000476553 CRIPAKQ8N1N5 446 aa13.84□□□□□ -0.19
NUP58-209ENST00000476553 SPSB2Q99619 263 aa13.83□□□□□ -0.2
NUP58-209ENST00000476553 PUS10Q3MIT2 529 aaKnown RBP13.82□□□□□ -0.2
NUP58-209ENST00000476553 OATP04181 439 aa13.81□□□□□ -0.2
NUP58-209ENST00000476553 TREML4Q6UXN2 200 aa13.8□□□□□ -0.2
NUP58-209ENST00000476553 METTL3Q86U44 580 aaKnown RBP13.8□□□□□ -0.2
NUP58-209ENST00000476553 RPIAP49247 311 aa13.79□□□□□ -0.2
NUP58-209ENST00000476553 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
NUP58-209ENST00000476553 AVPP01185 164 aa13.78□□□□□ -0.2
NUP58-209ENST00000476553 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
NUP58-209ENST00000476553 FOXC1Q12948 553 aa13.77□□□□□ -0.21
NUP58-209ENST00000476553 TOR4AQ9NXH8 423 aa13.77□□□□□ -0.21
NUP58-209ENST00000476553 THAP11Q96EK4 314 aa13.76□□□□□ -0.21
NUP58-209ENST00000476553 HIC1Q14526 733 aa13.75□□□□□ -0.21
NUP58-209ENST00000476553 MORN1Q5T089 497 aa13.75□□□□□ -0.21
NUP58-209ENST00000476553 RSPH4AQ5TD94 716 aa13.75□□□□□ -0.21
NUP58-209ENST00000476553 FCF1Q9Y324 198 aaKnown RBP13.74□□□□□ -0.21
NUP58-209ENST00000476553 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
NUP58-209ENST00000476553 SEMA3EO15041 775 aa13.72□□□□□ -0.21
NUP58-209ENST00000476553 P3H3Q8IVL6 736 aa13.71□□□□□ -0.21
NUP58-209ENST00000476553 FUT2Q10981 343 aa13.69□□□□□ -0.22
NUP58-209ENST00000476553 FAM160A2Q8N612 972 aaPredicted RBP13.69□□□□□ -0.22
NUP58-209ENST00000476553 SMCPP49901 116 aaPredicted RBP13.68□□□□□ -0.22
NUP58-209ENST00000476553 CTC1Q2NKJ3 1217 aa13.68□□□□□ -0.22
NUP58-209ENST00000476553 DAXXQ9UER7 740 aaPredicted RBP13.68□□□□□ -0.22
NUP58-209ENST00000476553 AXIN1O15169 862 aa13.66□□□□□ -0.22
NUP58-209ENST00000476553 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
NUP58-209ENST00000476553 CYP4X1Q8N118 509 aa13.66□□□□□ -0.22
NUP58-209ENST00000476553 RDH13Q8NBN7 331 aa13.66□□□□□ -0.22
NUP58-209ENST00000476553 PRDM9Q9NQV7 894 aa13.66□□□□□ -0.22
NUP58-209ENST00000476553 GMPR2Q9P2T1 348 aaKnown RBP13.66□□□□□ -0.22
NUP58-209ENST00000476553 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
NUP58-209ENST00000476553 GPR37O15354 613 aa13.65□□□□□ -0.22
NUP58-209ENST00000476553 FMNL1O95466 1100 aaPredicted RBP13.65□□□□□ -0.22
NUP58-209ENST00000476553 ATP6V1AP38606 617 aa13.65□□□□□ -0.22
NUP58-209ENST00000476553 SLC27A5Q9Y2P5 690 aa13.65□□□□□ -0.22
NUP58-209ENST00000476553 FECHP22830 423 aa13.63□□□□□ -0.23
NUP58-209ENST00000476553 GNPATO15228 680 aa13.62□□□□□ -0.23
NUP58-209ENST00000476553 DDX11L8A8MPP1 907 aa13.61□□□□□ -0.23
NUP58-209ENST00000476553 WFS1O76024 890 aa13.61□□□□□ -0.23
NUP58-209ENST00000476553 GCGRP47871 477 aa13.61□□□□□ -0.23
NUP58-209ENST00000476553 MSS51Q4VC12 460 aa13.61□□□□□ -0.23
NUP58-209ENST00000476553 BRICD5Q6PL45 260 aa13.61□□□□□ -0.23
NUP58-209ENST00000476553 C11orf95C9JLR9 678 aaPredicted RBP13.6□□□□□ -0.23
NUP58-209ENST00000476553 NFX1Q12986 1120 aaKnown RBP13.6□□□□□ -0.23
NUP58-209ENST00000476553 TESPA1A2RU30 521 aaPredicted RBP13.59□□□□□ -0.23
NUP58-209ENST00000476553 RBM26Q5T8P6 1007 aaKnown RBP13.59□□□□□ -0.23
NUP58-209ENST00000476553 NLRP7Q8WX94 980 aa13.58□□□□□ -0.24
NUP58-209ENST00000476553 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
NUP58-209ENST00000476553 WNT7AO00755 349 aa13.56□□□□□ -0.24
NUP58-209ENST00000476553 WIPF1O43516 503 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms